Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G039400.1 | Wheat | golgi | 98.87 | 98.87 |
TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 97.6 | 97.6 |
TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 97.17 | 96.22 |
TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 97.17 | 96.22 |
TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 96.18 | 95.37 |
TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 95.19 | 94.39 |
TraesCS2B01G398000.2 | Wheat | plastid | 95.19 | 94.39 |
TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 94.91 | 94.11 |
TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 94.91 | 93.98 |
TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 68.88 | 93.65 |
TraesCS5B01G468400.1 | Wheat | peroxisome | 72.7 | 93.12 |
TraesCS2B01G398300.2 | Wheat | peroxisome | 47.67 | 91.58 |
TraesCS2B01G224000.1 | Wheat | peroxisome | 91.23 | 91.23 |
TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 90.95 | 90.82 |
TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 90.38 | 90.51 |
Os04t0518400-01 | Rice | extracellular, plasma membrane | 90.38 | 89.5 |
TraesCS2B01G020100.1 | Wheat | peroxisome | 86.0 | 89.28 |
OQU81984 | Sorghum | peroxisome | 89.11 | 88.24 |
Zm00001d003015_P001 | Maize | peroxisome | 88.12 | 87.13 |
TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 86.7 | 86.1 |
TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 85.86 | 85.01 |
Solyc03g036480.1.1 | Tomato | peroxisome | 11.74 | 81.37 |
CDY18464 | Canola | peroxisome | 47.24 | 78.96 |
PGSC0003DMT400080765 | Potato | peroxisome | 48.37 | 78.62 |
Solyc03g042560.1.1 | Tomato | peroxisome | 50.92 | 77.25 |
PGSC0003DMT400055489 | Potato | mitochondrion | 42.72 | 77.24 |
Solyc03g036470.1.1 | Tomato | mitochondrion | 24.89 | 76.86 |
CDX67566 | Canola | cytosol | 53.18 | 76.58 |
CDX78161 | Canola | cytosol | 53.47 | 76.21 |
CDX73567 | Canola | cytosol | 53.47 | 76.21 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 73.27 | 75.4 |
Bra003126.1-P | Field mustard | cytosol | 75.11 | 75.11 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 55.02 | 74.95 |
Solyc10g086180.1.1 | Tomato | extracellular | 75.11 | 74.68 |
AT3G10340.1 | Thale cress | peroxisome | 74.54 | 74.54 |
CDX76219 | Canola | cytosol | 55.02 | 74.52 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.95 | 74.38 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 74.68 | 74.26 |
Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 75.67 | 74.2 |
Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 75.53 | 74.06 |
AT3G53260.1 | Thale cress | cytosol | 75.11 | 74.06 |
Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 75.39 | 73.93 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 75.39 | 73.82 |
Bra029831.1-P | Field mustard | cytosol | 73.69 | 73.8 |
CDY08611 | Canola | cytosol | 73.69 | 73.8 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 74.82 | 73.78 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 71.85 | 73.73 |
CDY00922 | Canola | cytosol | 73.55 | 73.65 |
Bra006985.1-P | Field mustard | cytosol | 73.55 | 73.65 |
Solyc03g078280.1.1 | Tomato | peroxisome | 26.73 | 73.26 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 74.96 | 73.1 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 74.26 | 73.02 |
TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 72.42 | 72.73 |
Solyc09g007890.1.1 | Tomato | plastid | 73.41 | 72.18 |
TraesCS3B01G027800.1 | Wheat | mitochondrion | 55.3 | 71.88 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 36.92 | 71.51 |
Bra039777.1-P | Field mustard | peroxisome | 51.49 | 71.37 |
CDX99621 | Canola | mitochondrion | 54.17 | 70.02 |
AT5G04230.2 | Thale cress | peroxisome | 68.18 | 69.05 |
TraesCS3B01G053900.1 | Wheat | peroxisome | 66.62 | 68.36 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.86 | 67.59 |
PGSC0003DMT400055529 | Potato | cytosol | 15.84 | 67.07 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 65.91 | 66.76 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.77 | 66.62 |
Bra005221.1-P | Field mustard | peroxisome | 34.79 | 66.31 |
CDY13306 | Canola | peroxisome | 19.52 | 65.71 |
CDX74991 | Canola | peroxisome | 34.51 | 64.21 |
CDX91331 | Canola | peroxisome | 34.51 | 64.21 |
CDY18463 | Canola | peroxisome | 23.48 | 63.12 |
VIT_11s0016g01640.t01 | Wine grape | peroxisome | 54.46 | 57.89 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.73 | 56.05 |
Solyc03g071870.1.1 | Tomato | peroxisome | 13.58 | 55.81 |
CDY61769 | Canola | peroxisome | 19.09 | 53.36 |
Bra028793.1-P | Field mustard | peroxisome | 22.07 | 53.06 |
Solyc10g011930.1.1 | Tomato | cytosol | 9.48 | 52.76 |
Solyc10g011920.1.1 | Tomato | cytosol | 9.34 | 51.97 |
VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.52 | 49.39 |
VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.88 | 48.28 |
VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.72 | 27.32 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS1B01G048400 | EnsemblPlants:TraesCS1B01G048400.2 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr1B:-:28443398..28445646
Molecular Weight (calculated)
76629.8 Da
IEP (calculated)
6.215
GRAVY (calculated)
-0.136
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFENANGLC VAQPARADPL NWGKAAEELS GSHLDGVKRM VEEYRRPVVT MEGASLTIAM VAAVAAGSDT RVELDESARG RVKESSDWVM NSMANGTDSY
101: GVTTGFGATS HRRTKEGGAL QRELIRFLNA GVFGTGGHDH VLPAAATRAA MLVRVNTLLQ GYSGIRFEIL ETVAALLNAN VTPCLPLRGT ITASGDLVPL
201: SYIAGLVTGR ANSVATAPDG SKVNAAEAFK IAGIQHGFFE LQPKEGLAMV NGTAVGSGLA SMVLFEANIL SLLAEVLSAV FCEVMNGKPE YTDHLTHKLK
301: HHPGQIEAAA IMEHILEGSS YMALAKKLGE LDPLMKPKQD RYALRTSPQW LGPQIEVIRA ATKSIEREIN SVNDNPLIDV SRGKAIHGGN FQGTPIGVSM
401: DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLGNPVTNH VQSAEQHNQD VNSLGLISSR KTAEAIDILK
501: LMSSTFMVAL CQAIDLRHLE ENIKDAVKSC VKMAARKTLS TNHNGHLHNA RFCEKDLLLT IDREAVFAYA DDPCSSNYPL MQKMRAVLVE HALANGEAER
601: DVETSVFAKL AAFEQELRAV LPREVEAART LVENGTAAQQ NRISECRSYP LYRFVRKELG TEYLTGEKTR SPGEEVDKVF VAMNQGKHID ALLECLKEWN
701: GEPLPIC
101: GVTTGFGATS HRRTKEGGAL QRELIRFLNA GVFGTGGHDH VLPAAATRAA MLVRVNTLLQ GYSGIRFEIL ETVAALLNAN VTPCLPLRGT ITASGDLVPL
201: SYIAGLVTGR ANSVATAPDG SKVNAAEAFK IAGIQHGFFE LQPKEGLAMV NGTAVGSGLA SMVLFEANIL SLLAEVLSAV FCEVMNGKPE YTDHLTHKLK
301: HHPGQIEAAA IMEHILEGSS YMALAKKLGE LDPLMKPKQD RYALRTSPQW LGPQIEVIRA ATKSIEREIN SVNDNPLIDV SRGKAIHGGN FQGTPIGVSM
401: DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLGNPVTNH VQSAEQHNQD VNSLGLISSR KTAEAIDILK
501: LMSSTFMVAL CQAIDLRHLE ENIKDAVKSC VKMAARKTLS TNHNGHLHNA RFCEKDLLLT IDREAVFAYA DDPCSSNYPL MQKMRAVLVE HALANGEAER
601: DVETSVFAKL AAFEQELRAV LPREVEAART LVENGTAAQQ NRISECRSYP LYRFVRKELG TEYLTGEKTR SPGEEVDKVF VAMNQGKHID ALLECLKEWN
701: GEPLPIC
001: MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC
Arabidopsis Description
PAL4Phenylalanine ammonia-lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS45]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.