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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, peroxisome
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003015_P001
Zm00001d003016_P001
Zm00001d017274_P001
Zm00001d017275_P001
Zm00001d017276_P001
Zm00001d017279_P001
Zm00001d020933_P001
Zm00001d027249_P001
Zm00001d029015_P001
Zm00001d033286_P001
Zm00001d036925_P001
Zm00001d051161_P003
Zm00001d051163_P002
Zm00001d051164_P001
Zm00001d051166_P001
Zm00001d053619_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 Zm00001d003015_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d003016_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017274_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017275_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017276_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d017279_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d020933_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d027249_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d029015_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d033286_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051161_P003 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051163_P002 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051164_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d051166_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d053619_P001 AT2G37040.1 21798944
AT2G37040.1 Zm00001d003015_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d003016_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017274_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017275_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017276_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d017279_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d020933_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d027249_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d029015_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d033286_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051161_P003 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051163_P002 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051164_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d051166_P001 AT3G10340.1 21798944
AT2G37040.1 Zm00001d053619_P001 AT3G10340.1 21798944
AT3G10340.1 Zm00001d036925_P001 AT1G15670.1 21798944
AT3G53260.1 Zm00001d003015_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d003016_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017274_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017275_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017276_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d017279_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d020933_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d027249_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d029015_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d033286_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051161_P003 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051163_P002 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051164_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d051166_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d053619_P001 AT3G10340.1 21798944
AT3G53260.1 Zm00001d003015_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d003016_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017274_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017275_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017276_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d017279_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d020933_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d027249_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d029015_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d033286_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051161_P003 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051163_P002 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051164_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d051166_P001 AT3G53260.1 21798944
AT3G53260.1 Zm00001d053619_P001 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81984 Sorghum peroxisome 94.83 94.96
Os04t0518400-01 Rice extracellular, plasma membrane 91.75 91.88
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 63.22 90.76
HORVU2Hr1G089540.1 Barley peroxisome 58.6 89.34
TraesCS2D01G204400.1 Wheat peroxisome 83.36 89.22
TraesCS2A01G381000.1 Wheat plastid 88.53 88.78
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 88.39 88.64
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 88.39 88.64
TraesCS2D01G377600.1 Wheat plastid 87.83 88.58
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 87.69 88.56
TraesCS2A01G381100.1 Wheat plastid 88.25 88.5
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 88.25 88.5
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 64.34 88.46
TraesCS1D01G039300.1 Wheat mitochondrion 65.17 88.42
TraesCS2B01G224000.1 Wheat peroxisome 87.41 88.4
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 88.11 88.36
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 88.11 88.36
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 88.11 88.36
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 87.41 88.28
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 87.27 88.26
TraesCS2D01G204700.1 Wheat peroxisome 87.27 88.26
TraesCS2D01G218700.1 Wheat peroxisome 87.27 88.26
TraesCS2B01G398000.2 Wheat plastid 87.97 88.22
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 87.13 88.12
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 87.13 88.12
TraesCS1D01G039400.1 Wheat golgi 86.99 87.98
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 87.69 87.94
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 86.85 87.84
TraesCS2A01G196700.1 Wheat peroxisome 86.71 87.69
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 87.55 87.68
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 87.41 87.66
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 86.43 87.54
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 87.27 87.39
TraesCS5B01G468400.1 Wheat peroxisome 67.41 87.32
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 86.29 87.27
Zm00001d017276_P001 Maize peroxisome 85.73 87.07
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 86.99 86.99
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 86.01 86.99
Zm00001d051166_P001 Maize extracellular 86.99 86.87
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 86.71 86.83
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 86.57 86.69
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 86.43 86.68
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 86.29 86.41
Zm00001d051163_P002 Maize peroxisome 85.87 85.52
TraesCS2B01G398300.2 Wheat peroxisome 43.92 85.33
Zm00001d017275_P001 Maize extracellular 85.59 85.12
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 79.3 84.88
TraesCS2B01G020100.1 Wheat peroxisome 79.72 83.7
HORVU2Hr1G089440.9 Barley plasma membrane 88.53 82.53
Solyc03g036480.1.1 Tomato peroxisome 11.75 82.35
Zm00001d029015_P001 Maize peroxisome 45.45 81.66
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 82.38 81.47
TraesCS2A01G212600.1 Wheat cytosol 29.93 80.75
Zm00001d027249_P001 Maize peroxisome 24.76 79.37
CDY18464 Canola peroxisome 46.85 79.2
PGSC0003DMT400080765 Potato peroxisome 47.69 78.39
PGSC0003DMT400055489 Potato mitochondrion 42.66 78.01
Solyc03g042560.1.1 Tomato peroxisome 50.49 77.47
Solyc03g036470.1.1 Tomato mitochondrion 24.62 76.86
Solyc10g086180.1.1 Tomato extracellular 76.36 76.79
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 75.94 76.37
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 73.29 76.27
CDX67566 Canola cytosol 52.31 76.17
Zm00001d033286_P001 Maize peroxisome 74.13 75.93
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 76.5 75.87
Solyc09g007920.2.1 Tomato extracellular, nucleus 76.36 75.73
Solyc09g007910.2.1 Tomato extracellular, nucleus 75.94 75.31
AT3G10340.1 Thale cress peroxisome 74.41 75.25
Bra003126.1-P Field mustard cytosol 74.41 75.25
CDX73567 Canola cytosol 52.17 75.2
CDX78161 Canola cytosol 52.17 75.2
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 75.8 75.07
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 75.52 74.79
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 75.1 74.69
AT3G53260.1 Thale cress cytosol 74.69 74.48
Zm00001d020933_P001 Maize mitochondrion 21.96 74.41
CDY66761 Canola cytosol, peroxisome, plastid 53.99 74.37
Bra029831.1-P Field mustard cytosol 73.43 74.36
CDY08611 Canola cytosol 73.43 74.36
KRG91925 Soybean cytosol, peroxisome, plastid 74.55 74.34
CDY00922 Canola cytosol 73.29 74.22
Bra006985.1-P Field mustard cytosol 73.15 74.08
Zm00001d017274_P001 Maize plasma membrane 72.73 73.97
Zm00001d051161_P003 Maize plastid 72.73 73.97
CDX76219 Canola cytosol 53.85 73.75
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 71.05 73.73
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 74.69 73.66
Solyc03g078280.1.1 Tomato peroxisome 26.57 73.64
Solyc09g007890.1.1 Tomato plastid 73.57 73.16
Zm00001d051164_P001 Maize peroxisome 15.94 72.61
Solyc03g071860.2.1 Tomato endoplasmic reticulum 36.78 72.05
Bra039777.1-P Field mustard peroxisome 50.63 70.98
Zm00001d053619_P001 Maize mitochondrion 41.68 70.45
CDX99621 Canola mitochondrion 53.71 70.2
AT5G04230.2 Thale cress peroxisome 67.13 68.77
CDY15917 Canola cytosol, peroxisome, plastid 65.87 67.48
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 65.73 67.34
Zm00001d003016_P001 Maize plastid 74.13 67.17
Solyc03g078270.1.1 Tomato endoplasmic reticulum 13.57 66.9
Bra005221.1-P Field mustard peroxisome 34.55 66.58
CDY13306 Canola peroxisome 19.16 65.24
PGSC0003DMT400055529 Potato cytosol 15.1 64.67
CDX74991 Canola peroxisome 34.27 64.47
CDX91331 Canola peroxisome 34.27 64.47
CDY18463 Canola peroxisome 23.36 63.5
Solyc03g071870.1.1 Tomato peroxisome 14.27 59.3
VIT_11s0016g01640.t01 Wine grape peroxisome 54.41 58.5
GSMUA_Achr9P15990_001 Banana peroxisome 56.08 57.04
Solyc10g011920.1.1 Tomato cytosol 9.93 55.91
Solyc10g011930.1.1 Tomato cytosol 9.93 55.91
CDY61769 Canola peroxisome 18.88 53.36
Bra028793.1-P Field mustard peroxisome 21.54 52.38
VIT_11s0016g01660.t01 Wine grape peroxisome 12.31 50.57
VIT_11s0016g01520.t01 Wine grape peroxisome 62.24 49.72
VIT_11s0016g01510.t01 Wine grape peroxisome 14.13 28.45
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10EntrezGene:100281042
MapMan:9.2.1.1.1UniProt:A0A1D6E5Y8InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987
GO:GO:0016829GO:GO:0016841GO:GO:0019748GO:GO:0045548InterPro:IPR023144InterPro:IPR024083
InterPro:L-Aspartase-likeProteinID:ONM15880.1PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF9
InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI0002214F01
EnsemblPlantsGene:Zm00001d003015EnsemblPlants:Zm00001d003015_P001EnsemblPlants:Zm00001d003015_T001SEG:seg::
Description
phenylalanine ammonia lyase6
Coordinates
chr2:+:29467931..29470598
Molecular Weight (calculated)
76781.9 Da
IEP (calculated)
5.758
GRAVY (calculated)
-0.079
Length
715 amino acids
Sequence
(BLAST)
001: MECENGHLAA SGNGGVCLAT PAPRADPLNW AKAAEDLAGS HLDAVKRMVE EYRRPLVKIE GASLTVAQVA AVAAAGEARV ELDESARGRV KASSDWVMDS
101: MMNGTDSYGV TTGFGATSHR RTKEGGALQR ELIRFLNAGA FGTGDDGHVL PAAATRAAML VRINTLLQGY SGIRFEILEA IAALLNTNVT PCLPLRGTIT
201: ASGDLVPLSY IAGLVTGRPN STAVAPDGRK VGAAEAFEIA GIQHGFFELQ PKEGLAMVNG TAVGSGLASM VLFEANVLAV LAEVMSAVFC EVMNGKPEYT
301: DHLTHKLKHH PGQIESAAIM EHILEGSSYM ALAKKLGELD PLMKPKQDRY ALRTSPQWLG PQIEVIRSAT KSIEREINSV NDNPLIDVSR GKALHGGNFQ
401: GTPIGVSMDN TRLAVAAIGK LMFAQFSELV NDFYNNGLPS NLSGGRNPSL DYGFKGAEIA MASYCSELQF LANPVTNHVQ SAEQHNQDVN SLGLISSRKT
501: AEAVDVLKLM SSTFLVALCQ AIDLRHLEEN LRSAVKRCVT VVARKTLSTG ATGALHDARF CEKDLLTAIE REAVFAYADD PCSATYPLMQ KMRSVLVEHA
601: LANGEAERDP DTSVFAKVAT FEEELRAALP REVDAARAAV ESGTAAIRNR IAECRSYPLY RFVREELGTE YLTGEKARSP GEEVDKVFVA MNLGKHIDAV
701: LECLKEWNGE PLPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.