Factsheet for Solyc03g071860.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
vacuole 4
extracellular 3
endoplasmic reticulum 4
plasma membrane 3
golgi 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g036470.1.1
Solyc03g036480.1.1
Solyc03g042560.1.1
Solyc03g071860.2.1
Solyc03g071870.1.1
Solyc03g078270.1.1
Solyc03g078280.1.1
Solyc03g120320.1.1
Solyc03g120330.1.1
Solyc06g066770.1.1
Solyc09g007890.1.1
Solyc09g007900.2.1
Solyc09g007910.2.1
Solyc09g007920.2.1
Solyc10g011920.1.1
Solyc10g011930.1.1
Solyc10g086180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Solyc03g036470.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G10340.1	Solyc03g120320.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc03g120330.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc06g066770.1.1	AT1G15670.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g036480.1.1	Tomato	peroxisome	23.56	84.31
Solyc03g078280.1.1	Tomato	peroxisome	59.45	84.11
PGSC0003DMT400080765	Potato	peroxisome	87.12	73.1
Solyc03g042560.1.1	Tomato	peroxisome	85.48	66.95
CDY18464	Canola	peroxisome	72.05	62.17
TraesCS2B01G398300.2	Wheat	peroxisome	52.05	51.63
TraesCS1D01G039300.1	Wheat	mitochondrion	64.38	44.59
CDX99621	Canola	mitochondrion	66.3	44.24
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	86.85	43.97
Solyc09g007920.2.1	Tomato	extracellular, nucleus	86.85	43.97
Solyc09g007910.2.1	Tomato	extracellular, nucleus	86.3	43.69
Solyc09g007890.1.1	Tomato	plastid	85.75	43.53
Solyc10g086180.1.1	Tomato	extracellular	81.37	41.77
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	77.53	41.19
TraesCS3B01G027800.1	Wheat	mitochondrion	60.27	40.44
AT3G10340.1	Thale cress	peroxisome	76.44	39.46
KRG91925	Soybean	cytosol, peroxisome, plastid	77.26	39.33
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	77.53	39.14
TraesCS2D01G204400.1	Wheat	peroxisome	71.51	39.07
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	55.62	39.04
GSMUA_Achr1P09070_001	Banana	peroxisome	69.86	38.99
CDY08611	Canola	cytosol	75.34	38.95
Bra006985.1-P	Field mustard	cytosol	75.07	38.81
Bra029831.1-P	Field mustard	cytosol	75.07	38.81
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	76.44	38.64
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	74.79	38.5
Bra003126.1-P	Field mustard	cytosol	74.52	38.47
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	68.49	38.4
CDY00922	Canola	cytosol	74.25	38.39
AT3G53260.1	Thale cress	cytosol	75.34	38.35
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	75.62	38.07
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	67.67	37.88
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	67.67	37.71
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	73.15	37.4
GSMUA_Achr2P00240_001	Banana	peroxisome	66.85	37.37
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	72.88	37.25
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	72.05	37.2
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	72.05	37.2
TraesCS2D01G204700.1	Wheat	peroxisome	71.78	37.06
TraesCS2D01G218700.1	Wheat	peroxisome	71.78	37.06
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	72.33	37.03
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	71.78	37.01
Os04t0518400-01	Rice	extracellular, plasma membrane	72.33	36.97
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	71.51	36.92
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	71.51	36.92
TraesCS2B01G224000.1	Wheat	peroxisome	71.51	36.92
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	71.51	36.86
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	71.23	36.83
Zm00001d003015_P001	Maize	peroxisome	72.05	36.78
TraesCS1D01G039400.1	Wheat	golgi	71.23	36.78
TraesCS2B01G398000.2	Wheat	plastid	71.78	36.75
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	71.78	36.75
GSMUA_Achr11P...	Banana	peroxisome	64.66	36.7
TraesCS2D01G377600.1	Wheat	plastid	71.23	36.67
Os02t0626600-00	Rice	plasma membrane	71.78	36.64
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	71.51	36.61
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	71.51	36.61
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	71.51	36.55
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	71.51	36.55
Zm00001d017276_P001	Maize	peroxisome	70.41	36.51
EES07175	Sorghum	cytosol, peroxisome, plastid	71.78	36.49
Zm00001d017275_P001	Maize	extracellular	71.78	36.44
OQU81984	Sorghum	peroxisome	71.23	36.41
Os02t0626400-01	Rice	mitochondrion, plasma membrane	71.51	36.35
Os02t0627100-01	Rice	plasma membrane	70.96	36.33
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	70.96	36.33
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	70.96	36.33
TraesCS6B01G258500.1	Wheat	extracellular, unclear	70.96	36.27
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	70.96	36.27
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	71.78	36.24
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	70.68	36.24
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	70.96	36.22
AT5G04230.2	Thale cress	peroxisome	69.04	36.1
Zm00001d051163_P002	Maize	peroxisome	70.96	36.07
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	70.68	36.03
EES05455	Sorghum	cytosol, peroxisome, plastid	70.41	35.99
EES07176	Sorghum	cytosol, peroxisome, plastid	70.41	35.99
EES07177	Sorghum	cytosol, peroxisome, plastid	70.41	35.99
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	70.14	35.96
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	70.41	35.94
Os04t0518100-01	Rice	plasma membrane	69.32	35.78
TraesCS2B01G020100.1	Wheat	peroxisome	66.58	35.68
TraesCS6D01G212500.1	Wheat	peroxisome	69.59	35.67
Zm00001d051166_P001	Maize	extracellular	69.86	35.61
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	58.36	35.44
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	66.58	34.81
CDY15917	Canola	cytosol, peroxisome, plastid	66.58	34.81
Os02t0626100-01	Rice	extracellular, plasma membrane	66.3	34.52
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	66.03	34.23
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	66.03	34.23
HORVU2Hr1G089440.9	Barley	plasma membrane	71.78	34.16
Zm00001d017274_P001	Maize	plasma membrane	65.75	34.14
EES07174	Sorghum	cytosol, peroxisome, plastid	65.75	34.09
Zm00001d051161_P003	Maize	plastid	65.48	34.0
HORVU6Hr1G058820.2	Barley	mitochondrion	66.03	33.99
EES12521	Sorghum	cytosol	64.93	33.71
Zm00001d033286_P001	Maize	peroxisome	64.38	33.67
Os12t0520200-01	Rice	plasma membrane	61.37	32.94
TraesCS5B01G468400.1	Wheat	peroxisome	49.59	32.79
EER93773	Sorghum	peroxisome	62.74	32.3
Bra005221.1-P	Field mustard	peroxisome	32.6	32.08
TraesCS3D01G016300.1	Wheat	peroxisome	60.55	32.08
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	60.55	32.03
TraesCS3B01G053900.1	Wheat	peroxisome	60.27	31.93
TraesCS3D01G016500.1	Wheat	peroxisome	58.63	31.06
GSMUA_Achr9P15990_001	Banana	peroxisome	59.45	30.87
CDX74991	Canola	peroxisome	32.05	30.79
CDX91331	Canola	peroxisome	32.05	30.79
Zm00001d003016_P001	Maize	plastid	66.03	30.55
CDX73567	Canola	cytosol	38.36	28.23
CDX78161	Canola	cytosol	38.36	28.23
CDX67566	Canola	cytosol	37.53	27.9
Bra039777.1-P	Field mustard	peroxisome	37.53	26.86
CDY66761	Canola	cytosol, peroxisome, plastid	38.08	26.78
HORVU2Hr1G089540.1	Barley	peroxisome	34.25	26.65
CDX76219	Canola	cytosol	38.08	26.63
Os08t0308300-00	Rice	plastid	12.88	25.0
Os12t0461300-00	Rice	plastid	16.99	24.51
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	9.59	24.14
Zm00001d029015_P001	Maize	peroxisome	26.03	23.87
Solyc03g036470.1.1	Tomato	mitochondrion	12.6	20.09
Zm00001d053619_P001	Maize	mitochondrion	17.26	14.89
CDY13306	Canola	peroxisome	7.95	13.81
Bra028793.1-P	Field mustard	peroxisome	10.41	12.93
Zm00001d020933_P001	Maize	mitochondrion	6.85	11.85
Zm00001d027249_P001	Maize	peroxisome	7.12	11.66
CDY61769	Canola	peroxisome	4.66	6.72
HORVU2Hr1G062750.1	Barley	mitochondrion	2.47	4.89
Zm00001d051164_P001	Maize	peroxisome	0.55	1.27
CDY18463	Canola	peroxisome	0.82	1.14
Solyc03g071870.1.1	Tomato	peroxisome	0.0	0.0
Solyc10g011920.1.1	Tomato	cytosol	0.0	0.0
Solyc10g011930.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc03g071860.2.1	EnsemblPlantsGene:Solyc03g071860.2	Gene3D:1.10.274.20	Gene3D:1.20.200.10	GO:GO:0003674	GO:GO:0003824
InterPro:Aromatic_Lyase	InterPro:IPR023144	InterPro:L-Aspartase-like	InterPro:Phe_NH3-lyase_shielding_dom_sf	KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24
PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	PFAM:PF00221	SUPFAM:SSF48557	UniParc:UPI0002767BE6	UniProt:K4BHL5
MapMan:9.2.1.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3:-:19025726..19027202

Molecular Weight (calculated)

40694.9 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.100

Length

365 amino acids

Sequence
(BLAST)

001: MASIVLYDSN ILVVMSEVLS AIFLKHHPSQ IEVAAIMEHI LECSSYVKAA QKLHEWILFK NQIVRAATKM IEREINSVND NPLIDVSRNK AIHGGNFQGT
101: PIGVSMDNTR LALGSIGKLM FAQFSELVNN YYNNGLPSNL IAGRNPSLDY GFKGAEIVMA SYCSELQFLA NSVTNHVQSA DQHNQDVNSL GLISARKITE
201: AVDILKLMSS TYLVALCQDI DLSHLEENLK SVVKTTVSQV AKRTLTIGAI GELHPARFCE KELLRVVDRE YLFTYADDPC SSTYPLMQNE KNVNSSIFQK
301: IGAFEDELNV LLPKEVETAR AVLESGNPSI PNRITECRSY PLYRLVRQQL GTELLTGEKF RSPDH

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.