Factsheet for Solyc03g078270.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
vacuole 5
extracellular 4
endoplasmic reticulum 5
plasma membrane 4
golgi 4
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g036470.1.1
Solyc03g036480.1.1
Solyc03g042560.1.1
Solyc03g071860.2.1
Solyc03g071870.1.1
Solyc03g078270.1.1
Solyc03g078280.1.1
Solyc03g120320.1.1
Solyc03g120330.1.1
Solyc06g066770.1.1
Solyc09g007890.1.1
Solyc09g007900.2.1
Solyc09g007910.2.1
Solyc09g007920.2.1
Solyc10g011920.1.1
Solyc10g011930.1.1
Solyc10g086180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Solyc03g036470.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G10340.1	Solyc03g120320.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc03g120330.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc06g066770.1.1	AT1G15670.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g036470.1.1	Tomato	mitochondrion	77.93	49.34
Zm00001d020933_P001	Maize	mitochondrion	42.07	28.91
Zm00001d027249_P001	Maize	peroxisome	40.0	26.01
Zm00001d053619_P001	Maize	mitochondrion	66.21	22.7
Zm00001d029015_P001	Maize	peroxisome	61.38	22.36
CDX73567	Canola	cytosol	74.48	21.77
CDX78161	Canola	cytosol	74.48	21.77
CDX67566	Canola	cytosol	73.1	21.59
HORVU2Hr1G089540.1	Barley	peroxisome	68.28	21.11
CDY66761	Canola	cytosol, peroxisome, plastid	75.17	21.0
Bra039777.1-P	Field mustard	peroxisome	73.79	20.98
CDX76219	Canola	cytosol	73.79	20.5
Solyc03g071870.1.1	Tomato	peroxisome	22.07	18.6
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	64.83	18.08
TraesCS1D01G039300.1	Wheat	mitochondrion	64.83	17.84
TraesCS5B01G468400.1	Wheat	peroxisome	67.59	17.75
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	72.41	17.47
CDX99621	Canola	mitochondrion	64.14	17.0
Solyc03g042560.1.1	Tomato	peroxisome	53.1	16.52
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	80.69	16.23
Solyc09g007920.2.1	Tomato	extracellular, nucleus	80.69	16.23
Solyc09g007890.1.1	Tomato	plastid	80.0	16.13
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	72.41	16.13
PGSC0003DMT400080765	Potato	peroxisome	48.28	16.09
GSMUA_Achr1P09070_001	Banana	peroxisome	72.41	16.05
Solyc10g086180.1.1	Tomato	extracellular	78.62	16.03
Solyc09g007910.2.1	Tomato	extracellular, nucleus	79.31	15.95
GSMUA_Achr2P00240_001	Banana	peroxisome	71.72	15.93
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	71.72	15.88
GSMUA_Achr11P...	Banana	peroxisome	70.34	15.86
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	71.03	15.8
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	73.1	15.43
AT3G10340.1	Thale cress	peroxisome	75.17	15.42
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	75.17	15.37
Bra006985.1-P	Field mustard	cytosol	74.48	15.3
Bra003126.1-P	Field mustard	cytosol	73.79	15.13
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	75.17	15.08
AT3G53260.1	Thale cress	cytosol	74.48	15.06
TraesCS3B01G027800.1	Wheat	mitochondrion	55.86	14.89
Bra029831.1-P	Field mustard	cytosol	72.41	14.87
CDY00922	Canola	cytosol	72.41	14.87
CDY08611	Canola	cytosol	72.41	14.87
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	73.79	14.82
KRG91925	Soybean	cytosol, peroxisome, plastid	73.1	14.78
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	73.79	14.76
TraesCS2D01G204400.1	Wheat	peroxisome	66.9	14.52
AT5G04230.2	Thale cress	peroxisome	69.66	14.47
Zm00001d017276_P001	Maize	peroxisome	68.97	14.2
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	68.97	14.04
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	68.97	14.04
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	67.59	14.04
CDY15917	Canola	cytosol, peroxisome, plastid	67.59	14.04
EES05455	Sorghum	cytosol, peroxisome, plastid	68.97	14.01
EES07176	Sorghum	cytosol, peroxisome, plastid	68.97	14.01
EES07177	Sorghum	cytosol, peroxisome, plastid	68.97	14.01
Os04t0518400-01	Rice	extracellular, plasma membrane	68.97	14.01
TraesCS6B01G258500.1	Wheat	extracellular, unclear	68.97	14.01
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	68.97	14.01
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	68.97	13.99
Os02t0626600-00	Rice	plasma membrane	68.97	13.99
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	68.97	13.99
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	68.97	13.97
TraesCS2D01G377600.1	Wheat	plastid	68.28	13.96
TraesCS6D01G212500.1	Wheat	peroxisome	68.28	13.9
Os02t0627100-01	Rice	plasma membrane	68.28	13.88
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	68.28	13.88
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	68.28	13.88
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	68.28	13.88
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	68.28	13.88
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	67.59	13.88
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	67.59	13.86
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	67.59	13.86
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	67.59	13.86
TraesCS1D01G039400.1	Wheat	golgi	67.59	13.86
TraesCS2B01G224000.1	Wheat	peroxisome	67.59	13.86
TraesCS2D01G204700.1	Wheat	peroxisome	67.59	13.86
TraesCS2D01G218700.1	Wheat	peroxisome	67.59	13.86
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	67.59	13.86
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	67.59	13.84
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	67.59	13.84
Zm00001d017274_P001	Maize	plasma membrane	66.9	13.8
EES07175	Sorghum	cytosol, peroxisome, plastid	68.28	13.79
TraesCS2B01G398000.2	Wheat	plastid	67.59	13.74
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	67.59	13.74
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	67.59	13.73
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	67.59	13.73
Zm00001d051166_P001	Maize	extracellular	67.59	13.69
Os02t0626400-01	Rice	mitochondrion, plasma membrane	67.59	13.65
Zm00001d017275_P001	Maize	extracellular	67.59	13.63
OQU81984	Sorghum	peroxisome	66.9	13.59
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	66.9	13.59
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	66.9	13.59
Zm00001d003015_P001	Maize	peroxisome	66.9	13.57
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	67.59	13.55
Os02t0626100-01	Rice	extracellular, plasma membrane	65.52	13.55
Zm00001d051161_P003	Maize	plastid	65.52	13.51
EES07174	Sorghum	cytosol, peroxisome, plastid	65.52	13.49
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	66.21	13.46
Zm00001d051163_P002	Maize	peroxisome	66.21	13.37
EES12521	Sorghum	cytosol	64.14	13.23
Os04t0518100-01	Rice	plasma membrane	64.14	13.15
Zm00001d033286_P001	Maize	peroxisome	62.76	13.04
CDY18464	Canola	peroxisome	37.93	13.0
TraesCS2B01G020100.1	Wheat	peroxisome	60.69	12.92
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	62.07	12.78
HORVU2Hr1G089440.9	Barley	plasma membrane	67.59	12.78
Os12t0520200-01	Rice	plasma membrane	59.31	12.65
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	61.38	12.64
EER93773	Sorghum	peroxisome	61.38	12.55
HORVU6Hr1G058820.2	Barley	mitochondrion	61.38	12.55
TraesCS3D01G016300.1	Wheat	peroxisome	58.62	12.34
TraesCS3B01G053900.1	Wheat	peroxisome	57.93	12.19
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	57.93	12.17
Zm00001d003016_P001	Maize	plastid	64.83	11.91
TraesCS3D01G016500.1	Wheat	peroxisome	56.55	11.9
GSMUA_Achr9P15990_001	Banana	peroxisome	55.86	11.52
CDY18463	Canola	peroxisome	20.0	11.03
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	24.14	9.59
HORVU2Hr1G062750.1	Barley	mitochondrion	5.52	4.35
CDY61769	Canola	peroxisome	6.9	3.95
Os12t0461300-00	Rice	plastid	6.9	3.95
Bra028793.1-P	Field mustard	peroxisome	6.21	3.06
Zm00001d051164_P001	Maize	peroxisome	2.76	2.55
Solyc10g011920.1.1	Tomato	cytosol	2.07	2.36
Solyc10g011930.1.1	Tomato	cytosol	2.07	2.36
Os08t0308300-00	Rice	plastid	2.07	1.6
CDY13306	Canola	peroxisome	2.07	1.43
Bra005221.1-P	Field mustard	peroxisome	2.07	0.81
CDX74991	Canola	peroxisome	2.07	0.79
CDX91331	Canola	peroxisome	2.07	0.79
TraesCS2B01G398300.2	Wheat	peroxisome	0.69	0.27
Solyc03g036480.1.1	Tomato	peroxisome	0.0	0.0
Solyc03g078280.1.1	Tomato	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc03g078270.1.1	EnsemblPlantsGene:Solyc03g078270.1	Gene3D:1.10.275.10	Gene3D:1.20.200.10	GO:GO:0003674	GO:GO:0003824
InterPro:Aromatic_Lyase	InterPro:Fumarase/histidase_N	InterPro:IPR024083	InterPro:L-Aspartase-like	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32
PFAM:PF00221	SignalP:SignalP-noTM	SUPFAM:SSF48557	UniParc:UPI0002767DCD	UniProt:K4BHQ6	MapMan:50.4.3

Description

No Description!

Coordinates

chr3:+:50303096..50303789

Molecular Weight (calculated)

15842.1 Da

IEP (calculated)

7.022

GRAVY (calculated)

-0.262

Length

145 amino acids

Sequence
(BLAST)

001: MPNPIGGYLC IILESVSNLL LHCWLLTGKP NSKAVGPNGE KHDAHEAFRG AGLSGGFFQL QPKEGHALVN GTTMSEVLSA IFAEVMNGKP EFTDYLTHKL
101: KHHPGQIEAA AIMEHILDGS SYVKAAQKLH EMDPLQKPKQ DRYAL

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.