Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G380900.1 | Wheat | cytosol, peroxisome, plastid | 98.04 | 98.04 |
TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 97.62 | 97.62 |
TraesCS2B01G398000.2 | Wheat | plastid | 97.19 | 97.19 |
TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 95.65 | 95.52 |
TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 69.57 | 95.38 |
TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 95.51 | 95.38 |
TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 94.39 | 95.19 |
TraesCS2B01G398300.2 | Wheat | peroxisome | 49.09 | 95.11 |
TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 94.95 | 94.82 |
TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 93.69 | 94.48 |
TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 94.39 | 94.39 |
TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 92.01 | 92.66 |
TraesCS5B01G468400.1 | Wheat | peroxisome | 71.67 | 92.57 |
TraesCS2B01G224000.1 | Wheat | peroxisome | 91.58 | 92.36 |
TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 90.88 | 91.78 |
Os04t0518400-01 | Rice | extracellular, plasma membrane | 91.16 | 91.04 |
HORVU2Hr1G089440.9 | Barley | plasma membrane | 97.9 | 91.0 |
TraesCS2B01G020100.1 | Wheat | peroxisome | 86.68 | 90.75 |
OQU81984 | Sorghum | peroxisome | 89.34 | 89.22 |
Zm00001d003015_P001 | Maize | peroxisome | 87.94 | 87.69 |
TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 86.82 | 86.94 |
TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 85.69 | 85.57 |
Solyc03g036480.1.1 | Tomato | peroxisome | 11.64 | 81.37 |
CDY18464 | Canola | peroxisome | 47.12 | 79.43 |
PGSC0003DMT400080765 | Potato | peroxisome | 47.69 | 78.16 |
PGSC0003DMT400055489 | Potato | mitochondrion | 42.22 | 76.98 |
Solyc03g036470.1.1 | Tomato | mitochondrion | 24.68 | 76.86 |
Solyc03g042560.1.1 | Tomato | peroxisome | 50.21 | 76.82 |
CDX67566 | Canola | cytosol | 52.73 | 76.58 |
CDX73567 | Canola | cytosol | 53.02 | 76.21 |
CDX78161 | Canola | cytosol | 53.02 | 76.21 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 73.21 | 75.98 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 54.84 | 75.34 |
Bra003126.1-P | Field mustard | cytosol | 74.47 | 75.11 |
Solyc10g086180.1.1 | Tomato | extracellular | 74.75 | 74.96 |
AT3G10340.1 | Thale cress | peroxisome | 74.33 | 74.96 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 74.61 | 74.82 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 75.18 | 74.76 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.6 | 74.65 |
CDX76219 | Canola | cytosol | 54.56 | 74.52 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 75.46 | 74.52 |
AT3G53260.1 | Thale cress | cytosol | 74.89 | 74.48 |
Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 75.18 | 74.34 |
Bra029831.1-P | Field mustard | cytosol | 73.49 | 74.22 |
Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 75.04 | 74.2 |
Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 75.04 | 74.2 |
CDY08611 | Canola | cytosol | 73.35 | 74.08 |
CDY00922 | Canola | cytosol | 73.35 | 74.08 |
Bra006985.1-P | Field mustard | cytosol | 73.07 | 73.8 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 75.04 | 73.79 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 71.11 | 73.58 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 74.19 | 73.57 |
TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 71.95 | 72.87 |
Solyc03g078280.1.1 | Tomato | peroxisome | 26.37 | 72.87 |
Solyc09g007890.1.1 | Tomato | plastid | 73.21 | 72.6 |
Bra039777.1-P | Field mustard | peroxisome | 51.33 | 71.76 |
TraesCS3B01G027800.1 | Wheat | mitochondrion | 54.7 | 71.69 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 36.33 | 70.96 |
CDX99621 | Canola | mitochondrion | 53.86 | 70.2 |
AT5G04230.2 | Thale cress | peroxisome | 68.02 | 69.48 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.88 | 68.28 |
TraesCS3B01G053900.1 | Wheat | peroxisome | 65.92 | 68.21 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.64 | 67.05 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 65.64 | 67.05 |
Bra005221.1-P | Field mustard | peroxisome | 34.78 | 66.85 |
PGSC0003DMT400055529 | Potato | cytosol | 15.29 | 65.27 |
CDY13306 | Canola | peroxisome | 19.21 | 65.24 |
CDX74991 | Canola | peroxisome | 34.5 | 64.74 |
CDX91331 | Canola | peroxisome | 34.5 | 64.74 |
CDY18463 | Canola | peroxisome | 23.42 | 63.5 |
VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.58 | 57.44 |
Solyc03g071870.1.1 | Tomato | peroxisome | 13.74 | 56.98 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 54.7 | 55.48 |
Solyc10g011930.1.1 | Tomato | cytosol | 9.54 | 53.54 |
CDY61769 | Canola | peroxisome | 18.79 | 52.96 |
Solyc10g011920.1.1 | Tomato | cytosol | 9.4 | 52.76 |
Bra028793.1-P | Field mustard | peroxisome | 21.74 | 52.72 |
VIT_11s0016g01520.t01 | Wine grape | peroxisome | 61.57 | 49.05 |
VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.92 | 48.85 |
VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.74 | 27.61 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2B01G398200 | EnsemblPlants:TraesCS2B01G398200.1 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr2B:+:565076231..565078742
Molecular Weight (calculated)
77220.7 Da
IEP (calculated)
6.029
GRAVY (calculated)
-0.125
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENAHVAA NGDGLCVAQP ARADPLNWGK AADELSGSHL DAVKRMVEEY RKPVVTMEGA SLTIAMVAAV AAGSDTRVEL DESARGRVKE SSDWVMNSMM
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGTDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLV EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVKTV ARKILSTDNN GHLHNARFCE KDLLLTIDRD AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAEHDMET SVFAKLAMFE QELRAVLPKE VEAARTAVEN GTAAQQNRIA ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFIAMN QGKHIDALLE
701: CLKEWNGEPL PIC
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGTDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLV EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVKTV ARKILSTDNN GHLHNARFCE KDLLLTIDRD AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAEHDMET SVFAKLAMFE QELRAVLPKE VEAARTAVEN GTAAQQNRIA ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFIAMN QGKHIDALLE
701: CLKEWNGEPL PIC
001: MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC
Arabidopsis Description
PAL4Phenylalanine ammonia-lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS45]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.