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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • plastid 3
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:plastid
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_09s0002g04930.t01
VIT_09s0002g05010.t01
VIT_09s0002g05080.t01
VIT_09s0002g05210.t01
VIT_09s0002g08860.t01
VIT_09s0002g08870.t01
VIT_09s0002g08880.t01
VIT_11s0016g01510.t01
VIT_11s0016g01520.t01
VIT_11s0016g01640.t01
VIT_11s0016g01660.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 VIT_11s0016g01510.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01520.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01640.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01660.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01510.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01520.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01640.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01660.t01 AT3G10340.1 21798944
AT3G10340.1 VIT_09s0002g04930.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05010.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05080.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05210.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08860.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08870.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08880.t01 AT1G15670.1 21798944
AT3G53260.1 VIT_11s0016g01510.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01520.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01640.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01660.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01510.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01520.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01640.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01660.t01 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0016g01640.t01 Wine grape peroxisome 73.52 98.95
VIT_11s0016g01660.t01 Wine grape peroxisome 18.32 94.25
GSMUA_Achr9P15990_001 Banana peroxisome 59.33 75.53
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 39.89 68.65
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 37.88 68.07
CDY18464 Canola peroxisome 31.96 67.61
VIT_00s2508g00010.t01 Wine grape cytosol, peroxisome, plastid 34.86 66.52
HORVU2Hr1G089540.1 Barley peroxisome 34.64 66.1
TraesCS1D01G039300.1 Wheat mitochondrion 38.55 65.46
TraesCS5B01G468400.1 Wheat peroxisome 40.34 65.4
CDX67566 Canola cytosol 35.53 64.77
TraesCS2D01G204400.1 Wheat peroxisome 47.93 64.22
CDX78161 Canola cytosol 35.53 64.11
CDX73567 Canola cytosol 35.42 63.91
VIT_08s0040g01710.t01 Wine grape cytosol, peroxisome, plastid 50.5 63.66
Zm00001d017276_P001 Maize peroxisome 50.06 63.64
CDY66761 Canola cytosol, peroxisome, plastid 36.87 63.58
VIT_16s0039g01100.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 50.39 63.52
EES05455 Sorghum cytosol, peroxisome, plastid 50.5 63.31
EES07176 Sorghum cytosol, peroxisome, plastid 50.5 63.31
EES07177 Sorghum cytosol, peroxisome, plastid 50.5 63.31
VIT_16s0039g01110.t01 Wine grape cytosol, peroxisome, plastid 50.17 63.24
VIT_16s0039g01130.t01 Wine grape cytosol, peroxisome, plastid 50.17 63.24
Bra003126.1-P Field mustard cytosol 49.94 63.22
VIT_16s0039g01120.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 50.06 63.1
VIT_16s0039g01170.t01 Wine grape cytosol, peroxisome, plastid 50.06 63.1
VIT_16s0039g01240.t01 Wine grape cytosol, peroxisome, plastid 50.06 63.1
VIT_16s0039g01280.t01 Wine grape cytosol, peroxisome, plastid 50.06 63.1
VIT_00s2849g00010.t01 Wine grape peroxisome 21.68 62.99
Zm00001d051163_P002 Maize peroxisome 50.5 62.95
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 50.06 62.92
VIT_06s0004g02620.t01 Wine grape cytosol, peroxisome, plastid 50.39 62.9
CDX76219 Canola cytosol 36.65 62.84
AT3G10340.1 Thale cress peroxisome 49.61 62.8
TraesCS2D01G204700.1 Wheat peroxisome 49.61 62.8
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 49.94 62.78
TraesCS6B01G258500.1 Wheat extracellular, unclear 50.06 62.75
TraesCS2A01G196700.1 Wheat peroxisome 49.5 62.66
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 50.06 62.66
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 50.06 62.66
TraesCS6D01G212500.1 Wheat peroxisome 49.83 62.64
AT3G53260.1 Thale cress cytosol 50.17 62.62
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 49.39 62.61
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 49.94 62.6
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 49.94 62.6
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 49.5 62.57
Os02t0627100-01 Rice plasma membrane 49.83 62.55
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 49.39 62.52
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 49.39 62.52
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 49.72 62.5
VIT_16s0039g01360.t01 Wine grape cytosol, peroxisome, plastid 49.5 62.39
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 49.27 62.38
TraesCS3B01G027800.1 Wheat mitochondrion 37.88 62.32
Os02t0626400-01 Rice mitochondrion, plasma membrane 49.94 62.26
Zm00001d003015_P001 Maize peroxisome 49.72 62.24
TraesCS1D01G039400.1 Wheat golgi 49.16 62.23
TraesCS2B01G224000.1 Wheat peroxisome 49.16 62.23
TraesCS2D01G377600.1 Wheat plastid 49.27 62.2
Os04t0518400-01 Rice extracellular, plasma membrane 49.61 62.18
CDX99621 Canola mitochondrion 37.99 62.16
Zm00001d051166_P001 Maize extracellular 49.72 62.15
TraesCS2A01G381000.1 Wheat plastid 49.5 62.13
TraesCS2B01G398000.2 Wheat plastid 49.5 62.13
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 49.5 62.13
Zm00001d029015_P001 Maize peroxisome 27.6 62.06
OQU81984 Sorghum peroxisome 49.5 62.04
Bra006985.1-P Field mustard cytosol 48.94 62.04
CDY00922 Canola cytosol 48.94 62.04
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 49.05 62.01
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 49.39 61.99
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 48.94 61.95
TraesCS2D01G218700.1 Wheat peroxisome 48.94 61.95
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 49.39 61.9
Zm00001d017275_P001 Maize extracellular 49.72 61.89
Os05t0427400-00 Rice cytosol, peroxisome, plastid 49.5 61.87
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 49.27 61.85
TraesCS2A01G381100.1 Wheat plastid 49.27 61.85
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 49.27 61.85
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 49.27 61.85
EES07175 Sorghum cytosol, peroxisome, plastid 49.61 61.84
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 48.83 61.81
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 48.72 61.67
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 49.16 61.62
Bra029831.1-P Field mustard cytosol 48.6 61.61
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 49.05 61.57
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 49.05 61.57
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 49.05 61.57
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 49.05 61.57
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 49.05 61.48
CDY08611 Canola cytosol 48.49 61.47
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 45.81 61.38
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 49.5 61.36
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 48.94 61.34
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 49.5 61.1
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 48.72 61.06
VIT_16s0039g01300.t01 Wine grape vacuole 50.06 61.04
Os02t0626600-00 Rice plasma membrane 48.72 60.98
EES12521 Sorghum cytosol 47.82 60.88
Bra039777.1-P Field mustard peroxisome 34.64 60.78
VIT_13s0019g04460.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 49.05 60.72
Os02t0626100-01 Rice extracellular, plasma membrane 47.49 60.63
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 47.6 60.51
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 47.6 60.51
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 47.37 60.23
Os04t0518100-01 Rice plasma membrane 47.37 59.97
Zm00001d017274_P001 Maize plasma membrane 46.93 59.74
Zm00001d051161_P003 Maize plastid 46.93 59.74
EES07174 Sorghum cytosol, peroxisome, plastid 46.82 59.52
AT5G04230.2 Thale cress peroxisome 46.03 59.03
Zm00001d033286_P001 Maize peroxisome 45.92 58.88
TraesCS2B01G020100.1 Wheat peroxisome 44.36 58.3
CDY15917 Canola cytosol, peroxisome, plastid 45.25 58.02
Os12t0520200-01 Rice plasma membrane 44.02 57.94
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 45.14 57.88
TraesCS3A01G029200.1 Wheat peroxisome 44.47 57.76
TraesCS3B01G053900.1 Wheat peroxisome 44.47 57.76
TraesCS3D01G016300.1 Wheat peroxisome 44.47 57.76
HORVU2Hr1G089440.9 Barley plasma membrane 49.39 57.63
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 46.48 57.54
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 44.25 57.39
TraesCS2A01G212600.1 Wheat cytosol 16.98 57.36
EER93773 Sorghum peroxisome 44.92 56.7
TraesCS2B01G398300.2 Wheat peroxisome 23.13 56.25
TraesCSU01G030700.1 Wheat peroxisome 42.46 55.96
TraesCS3D01G016500.1 Wheat peroxisome 42.57 55.3
HORVU6Hr1G058820.2 Barley mitochondrion 43.69 55.15
Zm00001d003016_P001 Maize plastid 48.16 54.63
Zm00001d027249_P001 Maize peroxisome 13.41 53.81
Zm00001d020933_P001 Maize mitochondrion 12.4 52.61
CDY13306 Canola peroxisome 12.07 51.43
Zm00001d053619_P001 Maize mitochondrion 24.25 51.3
Bra005221.1-P Field mustard peroxisome 20.67 49.87
CDY18463 Canola peroxisome 14.41 49.05
CDX74991 Canola peroxisome 20.45 48.16
CDX91331 Canola peroxisome 20.45 48.16
Zm00001d051164_P001 Maize peroxisome 7.93 45.22
VIT_16s0039g01320.t01 Wine grape peroxisome 6.37 44.53
CDY61769 Canola peroxisome 11.62 41.11
HORVU2Hr1G062750.1 Barley mitochondrion 8.38 40.76
Bra028793.1-P Field mustard peroxisome 13.3 40.48
VIT_11s0016g01510.t01 Wine grape peroxisome 15.75 39.72
Os12t0461300-00 Rice plastid 9.27 32.81
Os08t0308300-00 Rice plastid 5.36 25.53
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10EntrezGene:100255939
wikigene:100255939MapMan:9.2.1.1.1InterPro:Aromatic_LyaseProteinID:CCB51422ProteinID:CCB51422.1UniProt:F6HGU6
EMBL:FN595756InterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987GO:GO:0016829GO:GO:0016841
GO:GO:0019748GO:GO:0045548InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likeEntrezGene:LOC100255939
wikigene:LOC100255939PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF30InterPro:Phe/His_NH3-lyase_AS
InterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI000210848CArrayExpress:VIT_11s0016g01520
EnsemblPlantsGene:VIT_11s0016g01520EnsemblPlants:VIT_11s0016g01520.t01RefSeq:XP_002278516RefSeq:XP_002278516.2SEG:seg:
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F6HGU6]
Coordinates
chr11:+:1210039..1213113
Molecular Weight (calculated)
99360.0 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.254
Length
895 amino acids
Sequence
(BLAST)
001: MSMSINGVSP SFQSFRPPTL PLPVEEENPF SILGESRHVL APPHWKKAAE ALQCGHFDEV CAMVSQFAHA QTVDIQGTAL TVAQVTALAR GDHVRVALDE
101: AVARGRVTRS ADWVAENISR GTDTYGVTTG FGATSHRRTN KTADLQTELI RFLNAGVIGK ETLPASFSKA AMLVRANTLM QGYSGIRWEI LEAMAKLINL
201: NLIPKLPLRG TITASGDLVP LSYIAGVLTG RHNSKVVTPE GEEITAMEAL KRAGIEAPFQ LQAKEGLALV NGTAVGSAVA ATVCFDANIL GLLAEVLSAL
301: FCEVMNGKPE FTDPLTHELK HHPGQIESAA IMEFLLDESD YMKAAKLRQE KDVLMKPKQD RYALRTSPQW LGPQIEVIRM ATHAIEREIN SVNDNPLIDV
401: SRDLALHGGN FQGTPIGVSM DNLRIAIAAI GKLMFAQFSE LVCDYYNGGL PSNLSGGPNP SLDYGFKGAE IAMAAYCSEL QYLANPVTTH VQSAEQHNQD
501: VNSLGLISAR KSAEAVEILK LMSATYMVAL CQAVDLRHLE ENMREVVKHL ITQVARKTLY TDEDGTLLES RFCEKELQQV VENLPVFSYI DDPTNPSYTF
601: LPQLRDVLVE RALKDPKSTD SAGYSIFKRI PIFQEELKER LIEEISKARE RFDNGDFPVP NRIKKCRTYP IYGFVRKEVG TKLLSGENKV NEDGTLLESR
701: FCEKELQQVV ENLPVFSYID DPTNPSYTFL PQLRDVLVER ALKDPKSTDS AGYSIFKRIP IFQEELKERL IEEISKARER FDNGDFPIPN RIKKCRTYPI
801: YGFVRKEVGT KLLSGENKVS PGEDIEKVYE AINDGKLGDV LMKCLSFWRG TSGPFTPRPS GLSSPAQFNP EYWGWFEKLR SPSSASNGRV NWDQL
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.