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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 3
  • vacuole 2
  • plastid 1
  • peroxisome 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:nucleus
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_09s0002g04930.t01
VIT_09s0002g05010.t01
VIT_09s0002g05080.t01
VIT_09s0002g05210.t01
VIT_09s0002g08860.t01
VIT_09s0002g08870.t01
VIT_09s0002g08880.t01
VIT_11s0016g01510.t01
VIT_11s0016g01520.t01
VIT_11s0016g01640.t01
VIT_11s0016g01660.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 VIT_11s0016g01510.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01520.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01640.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01660.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01510.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01520.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01640.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01660.t01 AT3G10340.1 21798944
AT3G10340.1 VIT_09s0002g04930.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05010.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05080.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05210.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08860.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08870.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08880.t01 AT1G15670.1 21798944
AT3G53260.1 VIT_11s0016g01510.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01520.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01640.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01660.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01510.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01520.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01640.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01660.t01 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_16s0039g01320.t01 Wine grape peroxisome 16.62 46.09
Zm00001d051164_P001 Maize peroxisome 20.28 45.86
HORVU2Hr1G062750.1 Barley mitochondrion 16.9 32.61
CDY13306 Canola peroxisome 18.31 30.95
Zm00001d027249_P001 Maize peroxisome 16.62 26.46
CDY18463 Canola peroxisome 18.59 25.1
CDY61769 Canola peroxisome 14.65 20.55
VIT_11s0016g01640.t01 Wine grape peroxisome 37.18 19.85
Bra005221.1-P Field mustard peroxisome 20.28 19.41
Bra028793.1-P Field mustard peroxisome 15.77 19.05
CDX74991 Canola peroxisome 20.28 18.95
CDX91331 Canola peroxisome 20.0 18.68
Zm00001d053619_P001 Maize mitochondrion 21.13 17.73
HORVU2Hr1G089540.1 Barley peroxisome 23.38 17.7
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 24.79 17.67
Zm00001d029015_P001 Maize peroxisome 19.15 17.09
VIT_00s2508g00010.t01 Wine grape cytosol, peroxisome, plastid 22.54 17.06
CDX73567 Canola cytosol 22.82 16.33
CDX78161 Canola cytosol 22.82 16.33
TraesCS5B01G468400.1 Wheat peroxisome 25.35 16.3
CDX67566 Canola cytosol 22.54 16.29
CDY66761 Canola cytosol, peroxisome, plastid 23.38 15.99
VIT_11s0016g01520.t01 Wine grape peroxisome 39.72 15.75
CDX76219 Canola cytosol 23.1 15.71
Bra039777.1-P Field mustard peroxisome 21.69 15.1
Zm00001d051163_P002 Maize peroxisome 30.14 14.9
TraesCS6B01G258500.1 Wheat extracellular, unclear 29.86 14.85
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 29.86 14.83
Os02t0626400-01 Rice mitochondrion, plasma membrane 29.86 14.76
EES07176 Sorghum cytosol, peroxisome, plastid 29.58 14.71
EES07177 Sorghum cytosol, peroxisome, plastid 29.58 14.71
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 29.58 14.71
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 29.58 14.71
EES05455 Sorghum cytosol, peroxisome, plastid 29.3 14.57
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 29.3 14.55
Zm00001d051166_P001 Maize extracellular 29.3 14.53
EES07175 Sorghum cytosol, peroxisome, plastid 29.3 14.48
Zm00001d017275_P001 Maize extracellular 29.3 14.46
Os02t0627100-01 Rice plasma membrane 29.01 14.45
Os04t0518400-01 Rice extracellular, plasma membrane 29.01 14.43
Zm00001d017276_P001 Maize peroxisome 28.45 14.35
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 28.45 14.19
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 28.45 14.19
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 28.45 14.17
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 28.45 14.17
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 28.45 14.15
Zm00001d003015_P001 Maize peroxisome 28.45 14.13
TraesCS6D01G212500.1 Wheat peroxisome 28.17 14.04
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 28.17 14.03
TraesCS2B01G398000.2 Wheat plastid 28.17 14.03
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 28.17 14.03
OQU81984 Sorghum peroxisome 28.17 14.01
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 28.17 14.01
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 28.17 14.01
TraesCS2A01G196700.1 Wheat peroxisome 27.89 14.0
TraesCS2B01G224000.1 Wheat peroxisome 27.89 14.0
TraesCS2D01G204700.1 Wheat peroxisome 27.89 14.0
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 27.89 13.98
TraesCS2D01G377600.1 Wheat plastid 27.89 13.96
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 27.89 13.9
TraesCS2A01G381000.1 Wheat plastid 27.89 13.88
TraesCS2A01G381100.1 Wheat plastid 27.89 13.88
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 27.89 13.88
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 27.89 13.88
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 27.89 13.88
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 27.61 13.86
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 27.61 13.84
VIT_13s0019g04460.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 28.17 13.83
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 27.61 13.74
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 27.61 13.74
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 27.32 13.74
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 27.61 13.73
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 27.61 13.73
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 27.32 13.72
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 27.32 13.72
TraesCS2D01G218700.1 Wheat peroxisome 27.32 13.72
VIT_08s0040g01710.t01 Wine grape cytosol, peroxisome, plastid 27.32 13.66
VIT_16s0039g01100.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 27.32 13.66
VIT_16s0039g01130.t01 Wine grape cytosol, peroxisome, plastid 27.32 13.66
VIT_16s0039g01170.t01 Wine grape cytosol, peroxisome, plastid 27.32 13.66
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 27.04 13.58
TraesCS1D01G039400.1 Wheat golgi 27.04 13.58
VIT_16s0039g01120.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 27.04 13.52
VIT_16s0039g01240.t01 Wine grape cytosol, peroxisome, plastid 27.04 13.52
VIT_16s0039g01280.t01 Wine grape cytosol, peroxisome, plastid 27.04 13.52
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 26.76 13.44
HORVU2Hr1G089440.9 Barley plasma membrane 29.01 13.43
Os05t0427400-00 Rice cytosol, peroxisome, plastid 27.04 13.41
VIT_16s0039g01110.t01 Wine grape cytosol, peroxisome, plastid 26.76 13.38
VIT_16s0039g01360.t01 Wine grape cytosol, peroxisome, plastid 26.76 13.38
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 26.48 13.3
Os02t0626100-01 Rice extracellular, plasma membrane 26.2 13.27
VIT_16s0039g01300.t01 Wine grape vacuole 27.32 13.22
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 19.15 13.08
VIT_06s0004g02620.t01 Wine grape cytosol, peroxisome, plastid 26.2 12.97
EES07174 Sorghum cytosol, peroxisome, plastid 25.63 12.93
Zm00001d033286_P001 Maize peroxisome 25.35 12.89
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 26.2 12.83
Zm00001d017274_P001 Maize plasma membrane 25.35 12.8
Zm00001d051161_P003 Maize plastid 25.35 12.8
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 25.35 12.78
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 25.35 12.78
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 25.92 12.74
EES12521 Sorghum cytosol 25.07 12.66
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 25.07 12.64
Bra029831.1-P Field mustard cytosol 25.07 12.61
CDY00922 Canola cytosol 25.07 12.61
CDY08611 Canola cytosol 25.07 12.61
AT3G10340.1 Thale cress peroxisome 25.07 12.59
Os04t0518100-01 Rice plasma membrane 25.07 12.59
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 23.66 12.57
TraesCS2D01G204400.1 Wheat peroxisome 23.66 12.57
Bra006985.1-P Field mustard cytosol 24.79 12.46
Bra003126.1-P Field mustard cytosol 24.79 12.45
EER93773 Sorghum peroxisome 24.79 12.41
Os12t0520200-01 Rice plasma membrane 23.66 12.35
AT5G04230.2 Thale cress peroxisome 24.23 12.32
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 24.23 12.32
CDY15917 Canola cytosol, peroxisome, plastid 24.23 12.32
TraesCS2B01G020100.1 Wheat peroxisome 23.38 12.19
Os02t0626600-00 Rice plasma membrane 24.51 12.17
Zm00001d003016_P001 Maize plastid 27.04 12.17
AT3G53260.1 Thale cress cytosol 24.51 12.13
TraesCS3A01G029200.1 Wheat peroxisome 23.38 12.05
TraesCS3B01G053900.1 Wheat peroxisome 23.1 11.9
TraesCS3D01G016300.1 Wheat peroxisome 23.1 11.9
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 22.82 11.74
GSMUA_Achr9P15990_001 Banana peroxisome 23.1 11.66
TraesCSU01G030700.1 Wheat peroxisome 21.97 11.49
TraesCS3D01G016500.1 Wheat peroxisome 22.25 11.47
Zm00001d020933_P001 Maize mitochondrion 6.76 11.37
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 19.44 9.54
TraesCS2B01G398300.2 Wheat peroxisome 9.58 9.24
Os12t0461300-00 Rice plastid 5.92 8.3
HORVU6Hr1G058820.2 Barley mitochondrion 15.49 7.76
Os08t0308300-00 Rice plastid 3.66 6.91
TraesCS2A01G212600.1 Wheat cytosol 4.23 5.66
TraesCS1D01G039300.1 Wheat mitochondrion 7.89 5.31
VIT_00s2849g00010.t01 Wine grape peroxisome 4.51 5.19
VIT_11s0016g01660.t01 Wine grape peroxisome 2.54 5.17
TraesCS3B01G027800.1 Wheat mitochondrion 7.61 4.96
CDX99621 Canola mitochondrion 7.32 4.75
CDY18464 Canola peroxisome 5.63 4.73
Protein Annotations
ArrayExpress:VIT_11s0016g01510EMBL:FN595756EnsemblPlants:VIT_11s0016g01510.t01EnsemblPlantsGene:VIT_11s0016g01510Gene3D:1.10.275.10GO:GO:0003674
GO:GO:0003824InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NInterPro:IPR024083InterPro:L-Aspartase-likePANTHER:PTHR10362
PANTHER:PTHR10362:SF7PFAM:PF00221ProteinID:CBI27845ProteinID:CBI27845.3SEG:segSUPFAM:SSF48557
UniParc:UPI0001BE3452UniProt:D7TCI7MapMan:35.1:::
Description
No Description!
Coordinates
chr11:+:1199154..1204975
Molecular Weight (calculated)
39888.7 Da
IEP (calculated)
9.252
GRAVY (calculated)
-0.398
Length
355 amino acids
Sequence
(BLAST)
001: MLLDECIHTS LSPKGSMGVY QIFCFSFSFF MTEEPSLAES LRLHGDPNLW VLIASHHNQH RIIQEMQPVA GIKHWNPIHN RQDVHLTFDP KPNSIISQIE
101: NKFHSLLSPL ELFLDSMSMS INGVSPSFQS FRPPTLPLPV EEENPFSILG ESRHVLAPPH WKKAAEALQC GHFDEVCGMV SQFAHAQTVD IQGTALTVAQ
201: VTALARGDHV RVALDEEAAR GRVTRSADWV AENISRGTDT YGVTTGFGAT SHRRTNKTAD LQTELIRFLN AGLKERLIEE ISKARERKRL FNMINDLPTI
301: FEVVTGAAKK QVKEKSSVSN HSSNKSKSKS KVRGSESENI QRLGSQRMRK KVWMR
Best Arabidopsis Sequence Match ( AT3G10340.1 )
(BLAST)
001: MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC
Arabidopsis Description
PAL4Phenylalanine ammonia-lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS45]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.