Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 87.59 | 88.21 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 87.45 | 88.07 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 87.31 | 87.93 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 79.55 | 80.46 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 78.14 | 78.69 |
| Zm00001d051161_P003 | Maize | plastid | 77.86 | 78.52 |
| Zm00001d017274_P001 | Maize | plasma membrane | 77.01 | 77.67 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 10.86 | 75.49 |
| CDY18464 | Canola | peroxisome | 44.29 | 74.23 |
| PGSC0003DMT400080765 | Potato | peroxisome | 44.71 | 72.87 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 70.1 | 72.03 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 47.25 | 71.89 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 23.13 | 71.62 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 39.35 | 71.36 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 25.81 | 70.93 |
| HORVU2Hr1G038120.1 | Barley | cytosol, peroxisome, plastid | 67.56 | 67.75 |
| HORVU1Hr1G022060.1 | Barley | cytosol, peroxisome, plastid | 67.28 | 67.47 |
| CDX99621 | Canola | mitochondrion | 52.05 | 67.46 |
| HORVU0Hr1G016330.1 | Barley | cytosol, peroxisome, plastid | 67.28 | 66.71 |
| HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 66.71 | 66.43 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 33.99 | 66.03 |
| HORVU2Hr1G038140.1 | Barley | mitochondrion, plastid | 66.01 | 64.73 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 62.62 | 64.63 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 64.74 | 64.56 |
| Solyc10g086180.1.1 | Tomato | extracellular | 64.6 | 64.42 |
| AT3G10340.1 | Thale cress | peroxisome | 63.89 | 64.07 |
| HORVU2Hr1G089540.1 | Barley | peroxisome | 42.03 | 63.54 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 61.64 | 63.43 |
| AT3G53260.1 | Thale cress | cytosol | 63.75 | 63.04 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 64.03 | 62.88 |
| Bra029831.1-P | Field mustard | cytosol | 62.34 | 62.61 |
| CDY08611 | Canola | cytosol | 62.34 | 62.61 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 63.19 | 62.48 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 63.61 | 62.47 |
| CDY00922 | Canola | cytosol | 62.2 | 62.46 |
| Bra003126.1-P | Field mustard | cytosol | 62.2 | 62.38 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 63.05 | 62.17 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 63.19 | 62.14 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 63.47 | 62.07 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 67.14 | 62.06 |
| Bra006985.1-P | Field mustard | cytosol | 61.78 | 62.04 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 63.05 | 62.0 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 62.76 | 61.72 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 12.55 | 61.38 |
| CDX67566 | Canola | cytosol | 42.03 | 60.69 |
| CDX73567 | Canola | cytosol | 42.45 | 60.69 |
| CDX78161 | Canola | cytosol | 42.31 | 60.48 |
| Solyc09g007890.1.1 | Tomato | plastid | 60.93 | 60.08 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 43.72 | 59.73 |
| AT5G04230.2 | Thale cress | peroxisome | 58.39 | 59.31 |
| CDX76219 | Canola | cytosol | 43.58 | 59.2 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 57.83 | 58.74 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 57.55 | 58.45 |
| Bra039777.1-P | Field mustard | peroxisome | 40.9 | 56.86 |
| PGSC0003DMT400055529 | Potato | cytosol | 13.26 | 56.29 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 51.48 | 51.92 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 47.81 | 50.98 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 12.27 | 50.0 |
| Bra005221.1-P | Field mustard | peroxisome | 25.67 | 49.06 |
| CDX74991 | Canola | peroxisome | 25.39 | 47.37 |
| CDX91331 | Canola | peroxisome | 25.39 | 47.37 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 55.15 | 43.69 |
| Bra028793.1-P | Field mustard | peroxisome | 17.07 | 41.16 |
| CDY18463 | Canola | peroxisome | 15.09 | 40.68 |
| CDY61769 | Canola | peroxisome | 14.39 | 40.32 |
| CDY13306 | Canola | peroxisome | 11.14 | 37.62 |
| HORVU2Hr1G062750.1 | Barley | mitochondrion | 7.19 | 27.72 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 6.35 | 26.16 |
| Solyc10g011930.1.1 | Tomato | cytosol | 3.53 | 19.68 |
| Solyc10g011920.1.1 | Tomato | cytosol | 3.39 | 18.9 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 7.76 | 15.49 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| UniProt:A0A287UB62 | InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009698 | GO:GO:0009800 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0016841 | GO:GO:0019748 | GO:GO:0045548 | EnsemblPlantsGene:HORVU6Hr1G058820 | EnsemblPlants:HORVU6Hr1G058820.2 | InterPro:IPR023144 |
| InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 | ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 |
| InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI000B47B006 |
| SEG:seg | : | : | : | : | : |
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A287UB62]
Coordinates
chrchr6H:-:385750062..385753712
Molecular Weight (calculated)
77116.6 Da
IEP (calculated)
9.271
GRAVY (calculated)
-0.283
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: PRRYLSWPLR PRFPPRRAHH HLLRLFFDSP APLRSLPATT TTHRENGRQR SHRREGPAQL GRGGGRAHRQ PPRRGEADGG AVPRASGEDR GRQPPRRPGG
101: GRGPGQGRVG RLRRTKDGPA LQVELLRHLN AGIFGPGADG HSLPAEVSRA AMLVRINTLL QGYSGIRFEI LEAITKLINT GVSPCLPLRG TITASGDLVP
201: LSYIAGLITG RPNAQATTVD GKKVDAAEAF KAAGIEGGFF KLNPKEGLAI VNGTSVGSAL AATVLFDCNV LAVLSEVLSA VFCEVMNGKP EFTDHLTHKL
301: KHHPGSIEAA AIMEHILAGS AFMGHAKKVN EIDTQLKPKQ DRYALRTSPQ WLGPQIEVIR SATKSIEREV NSVNDNPVID VHRGKALHGG NFQGTPIGVS
401: MDNTRLAIAN IGKLMFAQFS ELVNEFYNNG LTSNLAGSRN PSLDYGFKGT EIAMASYCSE LQYLANPVTN HVQSAEQHNQ DVNSLGLVSA RKTAEAVDIL
501: KLMSSTYMVA LCQAIDLRHL EENIKTSVKN CVTQVSKKVL TMNPTGDLSS ARFSEKSLIT AIDREAVFSY ADDACSANYP LMQKLRAVLV DHALTAGPGE
601: AESEATVFSK INKFEEELRS ALPREIEAAR VAFENGTAPI PNLIKESRSF PLYRFVREEL GCVYLTGEKL LSPGEECTKV FLGISQNKLI DPMLECLKEW
701: NGEPLPINV
101: GRGPGQGRVG RLRRTKDGPA LQVELLRHLN AGIFGPGADG HSLPAEVSRA AMLVRINTLL QGYSGIRFEI LEAITKLINT GVSPCLPLRG TITASGDLVP
201: LSYIAGLITG RPNAQATTVD GKKVDAAEAF KAAGIEGGFF KLNPKEGLAI VNGTSVGSAL AATVLFDCNV LAVLSEVLSA VFCEVMNGKP EFTDHLTHKL
301: KHHPGSIEAA AIMEHILAGS AFMGHAKKVN EIDTQLKPKQ DRYALRTSPQ WLGPQIEVIR SATKSIEREV NSVNDNPVID VHRGKALHGG NFQGTPIGVS
401: MDNTRLAIAN IGKLMFAQFS ELVNEFYNNG LTSNLAGSRN PSLDYGFKGT EIAMASYCSE LQYLANPVTN HVQSAEQHNQ DVNSLGLVSA RKTAEAVDIL
501: KLMSSTYMVA LCQAIDLRHL EENIKTSVKN CVTQVSKKVL TMNPTGDLSS ARFSEKSLIT AIDREAVFSY ADDACSANYP LMQKLRAVLV DHALTAGPGE
601: AESEATVFSK INKFEEELRS ALPREIEAAR VAFENGTAPI PNLIKESRSF PLYRFVREEL GCVYLTGEKL LSPGEECTKV FLGISQNKLI DPMLECLKEW
701: NGEPLPINV
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.