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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15917 Canola cytosol, peroxisome, plastid 83.67 83.67
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 83.52 83.52
CDX99621 Canola mitochondrion 65.33 83.36
Solyc03g036480.1.1 Tomato peroxisome 11.89 81.37
AT3G10340.1 Thale cress peroxisome 82.09 81.05
Solyc03g036470.1.1 Tomato mitochondrion 25.36 77.29
PGSC0003DMT400080765 Potato peroxisome 46.56 74.71
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 69.2 74.19
GSMUA_Achr1P09070_001 Banana peroxisome 69.48 74.16
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 63.61 73.88
Solyc03g042560.1.1 Tomato peroxisome 49.28 73.82
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 52.15 73.09
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 71.92 73.07
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 68.19 72.67
GSMUA_Achr2P00240_001 Banana peroxisome 67.62 72.28
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 67.48 72.24
PGSC0003DMT400055489 Potato mitochondrion 40.4 72.12
KRG91925 Soybean cytosol, peroxisome, plastid 73.5 71.55
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 72.78 71.45
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 70.34 71.26
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 53.01 71.15
Solyc09g007910.2.1 Tomato extracellular, nucleus 73.35 71.01
Solyc10g086180.1.1 Tomato extracellular 72.21 70.89
HORVU2Hr1G089540.1 Barley peroxisome 47.56 70.79
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 73.21 70.78
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 73.07 70.74
Solyc09g007920.2.1 Tomato extracellular, nucleus 73.07 70.74
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 72.78 70.65
AT3G53260.1 Thale cress cytosol 72.49 70.57
TraesCS1D01G039300.1 Wheat mitochondrion 53.15 70.4
TraesCS5B01G468400.1 Wheat peroxisome 55.59 70.29
Solyc09g007890.1.1 Tomato plastid 72.35 70.24
Solyc03g078280.1.1 Tomato peroxisome 25.93 70.16
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 72.78 70.07
GSMUA_Achr11P... Banana peroxisome 64.47 69.98
Solyc03g078270.1.1 Tomato endoplasmic reticulum 14.47 69.66
TraesCS2D01G204400.1 Wheat peroxisome 66.33 69.31
Solyc03g071860.2.1 Tomato endoplasmic reticulum 36.1 69.04
TraesCS2D01G377600.1 Wheat plastid 69.91 68.83
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 69.05 68.18
TraesCS2A01G381100.1 Wheat plastid 69.63 68.16
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 68.91 68.03
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 68.91 68.03
TraesCS2B01G398000.2 Wheat plastid 69.48 68.02
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 69.48 68.02
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 69.48 68.02
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 69.48 68.02
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 68.77 67.89
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 69.34 67.88
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 69.34 67.88
TraesCS2A01G381000.1 Wheat plastid 69.34 67.88
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 69.34 67.88
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 68.77 67.8
TraesCS1D01G039400.1 Wheat golgi 68.62 67.75
TraesCS2B01G224000.1 Wheat peroxisome 68.62 67.75
TraesCS2D01G204700.1 Wheat peroxisome 68.62 67.75
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 69.2 67.74
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 68.62 67.66
OQU81984 Sorghum peroxisome 69.2 67.65
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 69.2 67.65
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 68.48 67.61
TraesCS2D01G218700.1 Wheat peroxisome 68.48 67.61
Os04t0518400-01 Rice extracellular, plasma membrane 69.05 67.51
Zm00001d017276_P001 Maize peroxisome 68.05 67.47
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 68.91 67.46
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 68.19 67.42
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 68.77 67.42
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 68.77 67.42
Os02t0626400-01 Rice mitochondrion, plasma membrane 69.34 67.41
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 68.91 67.37
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 68.91 67.37
TraesCS2A01G196700.1 Wheat peroxisome 68.19 67.33
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 68.19 67.33
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 68.62 67.28
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 68.77 67.23
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 68.77 67.23
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 68.62 67.18
Os05t0427400-00 Rice cytosol, peroxisome, plastid 68.91 67.18
Zm00001d003015_P001 Maize peroxisome 68.77 67.13
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 68.62 67.09
TraesCS6B01G258500.1 Wheat extracellular, unclear 68.62 67.09
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 68.62 67.09
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 68.62 66.99
EES05455 Sorghum cytosol, peroxisome, plastid 68.48 66.95
EES07176 Sorghum cytosol, peroxisome, plastid 68.48 66.95
EES07177 Sorghum cytosol, peroxisome, plastid 68.48 66.95
TraesCS6D01G212500.1 Wheat peroxisome 68.19 66.85
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 68.34 66.71
Zm00001d051163_P002 Maize peroxisome 68.62 66.71
Zm00001d017275_P001 Maize extracellular 68.62 66.62
Os02t0627100-01 Rice plasma membrane 68.05 66.62
TraesCS3B01G027800.1 Wheat mitochondrion 51.72 66.36
Zm00001d051166_P001 Maize extracellular 67.91 66.2
EES07175 Sorghum cytosol, peroxisome, plastid 68.05 66.16
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 63.18 66.02
TraesCS2B01G020100.1 Wheat peroxisome 63.47 65.05
Os02t0626100-01 Rice extracellular, plasma membrane 65.33 65.05
Zm00001d017274_P001 Maize plasma membrane 65.47 65.01
Os04t0518100-01 Rice plasma membrane 65.47 64.64
Zm00001d051161_P003 Maize plastid 65.04 64.58
Zm00001d029015_P001 Maize peroxisome 36.68 64.32
EES12521 Sorghum cytosol 64.76 64.3
Os02t0626600-00 Rice plasma membrane 65.76 64.2
EES07174 Sorghum cytosol, peroxisome, plastid 64.61 64.06
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 64.61 64.06
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 64.47 63.92
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 64.47 63.92
HORVU2Hr1G089440.9 Barley plasma membrane 69.48 63.23
Zm00001d033286_P001 Maize peroxisome 63.18 63.18
Os12t0520200-01 Rice plasma membrane 61.17 62.79
TraesCS3D01G016300.1 Wheat peroxisome 61.89 62.7
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 61.75 62.46
TraesCS3A01G029200.1 Wheat peroxisome 61.6 62.41
TraesCS3B01G053900.1 Wheat peroxisome 61.46 62.26
TraesCS2B01G398300.2 Wheat peroxisome 32.81 62.23
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 64.33 62.1
TraesCSU01G030700.1 Wheat peroxisome 60.03 61.71
EER93773 Sorghum peroxisome 62.46 61.5
TraesCS3D01G016500.1 Wheat peroxisome 60.46 61.25
TraesCS2A01G212600.1 Wheat cytosol 22.92 60.38
Zm00001d027249_P001 Maize peroxisome 19.05 59.64
Zm00001d020933_P001 Maize mitochondrion 17.91 59.24
HORVU6Hr1G058820.2 Barley mitochondrion 59.31 58.39
Zm00001d003016_P001 Maize plastid 65.04 57.54
Solyc10g011920.1.1 Tomato cytosol 10.03 55.12
Solyc10g011930.1.1 Tomato cytosol 10.03 55.12
Solyc03g071870.1.1 Tomato peroxisome 13.32 54.07
Zm00001d053619_P001 Maize mitochondrion 32.66 53.9
GSMUA_Achr9P15990_001 Banana peroxisome 54.15 53.77
VIT_11s0016g01640.t01 Wine grape peroxisome 51.15 53.68
PGSC0003DMT400055529 Potato cytosol 12.75 53.29
Zm00001d051164_P001 Maize peroxisome 11.46 50.96
HORVU2Hr1G062750.1 Barley mitochondrion 12.46 47.28
VIT_11s0016g01520.t01 Wine grape peroxisome 59.03 46.03
VIT_11s0016g01660.t01 Wine grape peroxisome 11.03 44.25
Os12t0461300-00 Rice plastid 15.62 43.08
Os08t0308300-00 Rice plastid 9.03 33.51
VIT_11s0016g01510.t01 Wine grape peroxisome 12.32 24.23
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10EntrezGene:830302
MapMan:9.2.1.1.1ProteinID:AED90715.1ArrayExpress:AT5G04230EnsemblPlantsGene:AT5G04230RefSeq:AT5G04230TAIR:AT5G04230
RefSeq:AT5G04230-TAIR-GEnsemblPlants:AT5G04230.2TAIR:AT5G04230.2InterPro:Aromatic_LyaseUnigene:At.33157ncoils:Coil
UniProt:F4JW69InterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987
GO:GO:0016829GO:GO:0016841GO:GO:0019748GO:GO:0045548InterPro:IPR023144InterPro:IPR024083
InterPro:L-Aspartase-likeRefSeq:NP_001190223.1Symbol:PAL3PFAM:PF00221PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF30
InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI0000162454
Description
PAL3Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F4JW69]
Coordinates
chr5:+:1160634..1163898
Molecular Weight (calculated)
76677.9 Da
IEP (calculated)
6.469
GRAVY (calculated)
-0.155
Length
698 amino acids
Sequence
(BLAST)
001: MEFRQPNATA LSDPLNWNVA AEALKGSHLE EVKKMVKDYR KGTVQLGGET LTIGQVAAVA SGGPTVELSE EARGGVKASS DWVMESMNRD TDTYGITTGF
101: GSSSRRRTDQ GAALQKELIR YLNAGIFATG NEDDDRSNTL PRPATRAAML IRVNTLLQGY SGIRFEILEA ITTLLNCKIT PLLPLRGTIT ASGDLVPLSY
201: IAGFLIGRPN SRSVGPSGEI LTALEAFKLA GVSSFFELRP KEGLALVNGT AVGSALASTV LYDANILVVF SEVASAMFAE VMQGKPEFTD HLTHKLKHHP
301: GQIEAAAIME HILDGSSYVK EALHLHKIDP LQKPKQDRYV LGYALRTSPQ WLGPQIEVIR AATKMIEREI NSVNDNPLID VSRNKAIHGG NFQGTPIGVA
401: MDNTRLALAS IGKLMFAQFT ELVNDFYNNG LPSNLSGGRN PSLDYGLKGA EVAMASYCSE LQFLANPVTN HVESASQHNQ DVNSLGLISS RTTAEAVVIL
501: KLMSTTYLVA LCQAFDLRHL EEILKKAVNE VVSHTAKSVL AIEPFRKHDD ILGVVNREYV FSYVDDPSSL TNPLMQKLRH VLFDKALAEP EGETDTVFRK
601: IGAFEAELKF LLPKEVERVR TEYENGTFNV ANRIKKCRSY PLYRFVRNEL ETRLLTGEDV RSPGEDFDKV FRAISQGKLI DPLFECLKEW NGAPISIC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.