Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027249_P001 | Maize | peroxisome | 46.48 | 82.96 |
| Zm00001d020933_P001 | Maize | mitochondrion | 39.7 | 74.88 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 37.94 | 65.94 |
| Zm00001d053619_P001 | Maize | mitochondrion | 69.6 | 65.48 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 22.36 | 61.38 |
| CDX67566 | Canola | cytosol | 65.83 | 53.36 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 13.57 | 52.94 |
| CDX78161 | Canola | cytosol | 65.58 | 52.62 |
| CDX73567 | Canola | cytosol | 65.58 | 52.62 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 68.09 | 52.22 |
| CDX76219 | Canola | cytosol | 68.09 | 51.92 |
| Zm00001d051164_P001 | Maize | peroxisome | 20.35 | 51.59 |
| CDY18463 | Canola | peroxisome | 32.91 | 49.81 |
| Zm00001d017276_P001 | Maize | peroxisome | 87.44 | 49.43 |
| Bra039777.1-P | Field mustard | peroxisome | 62.56 | 48.82 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 87.19 | 48.53 |
| Zm00001d051166_P001 | Maize | extracellular | 84.92 | 47.21 |
| Zm00001d003015_P001 | Maize | peroxisome | 81.66 | 45.45 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 19.6 | 45.35 |
| Zm00001d051163_P002 | Maize | peroxisome | 81.66 | 45.26 |
| Zm00001d017275_P001 | Maize | extracellular | 81.41 | 45.06 |
| CDY13306 | Canola | peroxisome | 22.11 | 41.9 |
| HORVU2Hr1G062750.1 | Barley | mitochondrion | 19.35 | 41.85 |
| Zm00001d017274_P001 | Maize | plasma membrane | 71.36 | 40.4 |
| Zm00001d051161_P003 | Maize | plastid | 71.36 | 40.4 |
| Zm00001d033286_P001 | Maize | peroxisome | 70.6 | 40.26 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 68.84 | 39.88 |
| Solyc10g086180.1.1 | Tomato | extracellular | 71.11 | 39.8 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 72.11 | 39.75 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 70.85 | 39.66 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 68.59 | 39.62 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 71.61 | 39.53 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 71.36 | 39.5 |
| AT3G10340.1 | Thale cress | peroxisome | 70.1 | 39.46 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 71.36 | 39.39 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 71.36 | 39.39 |
| Solyc10g011920.1.1 | Tomato | cytosol | 12.56 | 39.37 |
| CDY00922 | Canola | cytosol | 69.35 | 39.09 |
| Bra029831.1-P | Field mustard | cytosol | 69.35 | 39.09 |
| CDY08611 | Canola | cytosol | 69.35 | 39.09 |
| Solyc09g007890.1.1 | Tomato | plastid | 70.6 | 39.08 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 69.85 | 38.77 |
| Bra003126.1-P | Field mustard | cytosol | 68.84 | 38.76 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 70.1 | 38.64 |
| Solyc10g011930.1.1 | Tomato | cytosol | 12.31 | 38.58 |
| AT3G53260.1 | Thale cress | cytosol | 68.59 | 38.08 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 69.1 | 37.93 |
| Bra006985.1-P | Field mustard | cytosol | 65.83 | 37.11 |
| AT5G04230.2 | Thale cress | peroxisome | 64.32 | 36.68 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 63.32 | 36.1 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 63.32 | 36.1 |
| Zm00001d003016_P001 | Maize | plastid | 69.1 | 34.85 |
| CDX99621 | Canola | mitochondrion | 47.49 | 34.55 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 51.76 | 30.98 |
| PGSC0003DMT400080765 | Potato | peroxisome | 33.17 | 30.34 |
| CDY61769 | Canola | peroxisome | 19.1 | 30.04 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 53.02 | 30.01 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 34.92 | 29.83 |
| CDY18464 | Canola | peroxisome | 31.16 | 29.31 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.06 | 27.6 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 23.87 | 26.03 |
| Bra028793.1-P | Field mustard | peroxisome | 18.84 | 25.51 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 23.62 | 24.04 |
| Bra005221.1-P | Field mustard | peroxisome | 18.09 | 19.41 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 17.09 | 19.15 |
| CDX91331 | Canola | peroxisome | 18.09 | 18.95 |
| CDX74991 | Canola | peroxisome | 18.09 | 18.95 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 10.05 | 15.5 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 0.5 | 1.15 |
| PGSC0003DMT400055529 | Potato | cytosol | 0.25 | 0.6 |
Protein Annotations
| EnsemblPlants:Zm00001d029015_P001 | EnsemblPlants:Zm00001d029015_T001 | EnsemblPlantsGene:Zm00001d029015 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016829 | GO:GO:0016841 | InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | InterPro:IPR024083 |
| InterPro:L-Aspartase-like | InterPro:Phe/His_NH3-lyase_AS | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF22 | PFAM:PF00221 | ProteinID:ONL97658.1 |
| ScanProsite:PS00488 | SUPFAM:SSF48557 | UniParc:UPI000844E7A2 | UniProt:A0A1D6K1R9 | MapMan:9.2.1.1.1 | : |
Description
Phenylalanine ammonia-lyase 1
Coordinates
chr1:+:54941440..54943661
Molecular Weight (calculated)
43196.1 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.033
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAEYRQPLV KIEGASLSIA QVAVVATGAG EARVELDESA RSRVKASIDW VMNSMMNGTD SYGVTTGFGA TSHRRTKEGG ALQRKLIKFL NAGAFCTSTD
101: DHVLPTEATR AAMLVCINTL LQGYSGIRFE ILEVIVKLLN ANVTPCLPLR GTVTASGDLV PLSYIVGLVT GCENSVALAP DGNKVNAAEA FKIAGIQGGF
201: FELQPKEGLA MRSPSSNPDS DGYFPNHITY LLAEVLSTVF CEVMNGKPEY TGHLTHKLKH HPRQIEAAAI MEHILEDSSF MKLAKKLGEL GPLMKPKQDR
301: YALRTSSQWL GPQIEGTLIG VSMDNTRLAI AAFSKLMFVQ FSELVNDYYN NGLPSNLSGG RNPSLDYSFK GTEIAMASYY SELQFLGNPV TNHVLKYV
101: DHVLPTEATR AAMLVCINTL LQGYSGIRFE ILEVIVKLLN ANVTPCLPLR GTVTASGDLV PLSYIVGLVT GCENSVALAP DGNKVNAAEA FKIAGIQGGF
201: FELQPKEGLA MRSPSSNPDS DGYFPNHITY LLAEVLSTVF CEVMNGKPEY TGHLTHKLKH HPRQIEAAAI MEHILEDSSF MKLAKKLGEL GPLMKPKQDR
301: YALRTSSQWL GPQIEGTLIG VSMDNTRLAI AAFSKLMFVQ FSELVNDYYN NGLPSNLSGG RNPSLDYSFK GTEIAMASYY SELQFLGNPV TNHVLKYV
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.