Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76219 | Canola | cytosol | 98.65 | 98.08 |
| CDX78161 | Canola | cytosol | 93.06 | 97.38 |
| CDX73567 | Canola | cytosol | 92.68 | 96.98 |
| CDX67566 | Canola | cytosol | 90.75 | 95.93 |
| CDY13306 | Canola | peroxisome | 38.34 | 94.76 |
| Bra039777.1-P | Field mustard | peroxisome | 91.33 | 92.94 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 36.8 | 83.41 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 16.18 | 82.35 |
| CDY18463 | Canola | peroxisome | 39.5 | 77.95 |
| HORVU2Hr1G089540.1 | Barley | peroxisome | 69.17 | 76.55 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 21.0 | 75.17 |
| TraesCS1A01G094900.1 | Wheat | cytosol, peroxisome, plastid | 70.33 | 73.29 |
| Zm00001d029015_P001 | Maize | peroxisome | 52.22 | 68.09 |
| TraesCS5B01G468400.1 | Wheat | peroxisome | 71.68 | 67.39 |
| AT3G53260.1 | Thale cress | cytosol | 92.87 | 67.22 |
| GSMUA_Achr8P18960_001 | Banana | cytosol, peroxisome, plastid | 74.95 | 64.73 |
| TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 64.16 | 64.04 |
| Zm00001d027249_P001 | Maize | peroxisome | 27.36 | 63.68 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 21.0 | 63.37 |
| Zm00001d020933_P001 | Maize | mitochondrion | 25.43 | 62.56 |
| GSMUA_Achr1P09070_001 | Banana | peroxisome | 77.65 | 61.62 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 77.65 | 61.53 |
| GSMUA_Achr5P18560_001 | Banana | cytosol, peroxisome, plastid | 76.88 | 61.2 |
| GSMUA_Achr5P03950_001 | Banana | cytosol, peroxisome, plastid | 76.69 | 61.14 |
| GSMUA_Achr2P00240_001 | Banana | peroxisome | 76.3 | 60.64 |
| Solyc10g011930.1.1 | Tomato | cytosol | 14.64 | 59.84 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 78.61 | 59.39 |
| Solyc10g011920.1.1 | Tomato | cytosol | 14.45 | 59.06 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 81.7 | 58.81 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 81.12 | 58.72 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 81.5 | 58.67 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 81.5 | 58.67 |
| CDY00922 | Canola | cytosol | 79.77 | 58.64 |
| CDY08611 | Canola | cytosol | 79.77 | 58.64 |
| GSMUA_Achr11P... | Banana | peroxisome | 72.64 | 58.63 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 80.15 | 58.51 |
| Solyc09g007890.1.1 | Tomato | plastid | 80.92 | 58.41 |
| Solyc10g086180.1.1 | Tomato | extracellular | 79.58 | 58.09 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 80.73 | 58.03 |
| Zm00001d053619_P001 | Maize | mitochondrion | 47.21 | 57.92 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 79.77 | 57.58 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 75.34 | 56.75 |
| TraesCS2D01G377600.1 | Wheat | plastid | 76.11 | 55.71 |
| TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 76.11 | 55.4 |
| TraesCS2B01G398000.2 | Wheat | plastid | 75.92 | 55.26 |
| TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 75.92 | 55.26 |
| TraesCS1D01G039300.1 | Wheat | mitochondrion | 56.07 | 55.22 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 75.92 | 55.18 |
| TraesCS2A01G381100.1 | Wheat | plastid | 75.72 | 55.12 |
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 74.95 | 55.02 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 75.53 | 54.98 |
| HORVU1Hr1G022060.1 | Barley | cytosol, peroxisome, plastid | 74.76 | 54.88 |
| HORVU2Hr1G038120.1 | Barley | cytosol, peroxisome, plastid | 74.76 | 54.88 |
| TraesCS1D01G039400.1 | Wheat | golgi | 74.76 | 54.88 |
| TraesCS2D01G204700.1 | Wheat | peroxisome | 74.76 | 54.88 |
| TraesCS2D01G218700.1 | Wheat | peroxisome | 74.76 | 54.88 |
| TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 74.76 | 54.88 |
| TraesCS2A01G380800.1 | Wheat | cytosol, peroxisome, plastid | 75.34 | 54.84 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 75.34 | 54.84 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 74.57 | 54.82 |
| TraesCS2D01G204400.1 | Wheat | peroxisome | 70.52 | 54.79 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 74.57 | 54.74 |
| TraesCS2B01G224000.1 | Wheat | peroxisome | 74.57 | 54.74 |
| TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 75.14 | 54.7 |
| TraesCS2A01G380900.1 | Wheat | cytosol, peroxisome, plastid | 75.14 | 54.7 |
| TraesCS2A01G381000.1 | Wheat | plastid | 75.14 | 54.7 |
| TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 75.14 | 54.7 |
| TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 74.57 | 54.66 |
| TraesCS1A01G037800.1 | Wheat | cytosol, peroxisome, plastid | 75.14 | 54.62 |
| TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 75.14 | 54.62 |
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 75.14 | 54.62 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 74.37 | 54.6 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 74.37 | 54.6 |
| TraesCS4A01G401300.1 | Wheat | cytosol, peroxisome, plastid | 74.95 | 54.56 |
| TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 74.37 | 54.52 |
| TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 74.95 | 54.48 |
| Os02t0626400-01 | Rice | mitochondrion, plasma membrane | 75.34 | 54.46 |
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 74.57 | 54.35 |
| TraesCS6D01G212500.1 | Wheat | peroxisome | 74.57 | 54.35 |
| TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 74.76 | 54.34 |
| HORVU0Hr1G016330.1 | Barley | cytosol, peroxisome, plastid | 74.76 | 54.27 |
| TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 74.57 | 54.2 |
| Zm00001d051164_P001 | Maize | peroxisome | 16.38 | 54.14 |
| Os02t0627100-01 | Rice | plasma membrane | 74.37 | 54.14 |
| Zm00001d017276_P001 | Maize | peroxisome | 73.41 | 54.12 |
| HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 74.18 | 54.07 |
| OQU81984 | Sorghum | peroxisome | 74.37 | 54.06 |
| TraesCS6A01G222800.1 | Wheat | cytosol, peroxisome, plastid | 74.37 | 54.06 |
| TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 74.37 | 54.06 |
| Os05t0427400-00 | Rice | cytosol, peroxisome, plastid | 74.57 | 54.05 |
| Zm00001d003015_P001 | Maize | peroxisome | 74.37 | 53.99 |
| TraesCS6A01G222700.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.99 | 53.93 |
| EES05455 | Sorghum | cytosol, peroxisome, plastid | 74.18 | 53.92 |
| EES07176 | Sorghum | cytosol, peroxisome, plastid | 74.18 | 53.92 |
| EES07177 | Sorghum | cytosol, peroxisome, plastid | 74.18 | 53.92 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 72.45 | 53.87 |
| Zm00001d051166_P001 | Maize | extracellular | 73.99 | 53.63 |
| Zm00001d017275_P001 | Maize | extracellular | 74.18 | 53.55 |
| Zm00001d051163_P002 | Maize | peroxisome | 73.99 | 53.48 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 73.6 | 53.43 |
| EES07175 | Sorghum | cytosol, peroxisome, plastid | 73.6 | 53.2 |
| TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 68.21 | 52.99 |
| TraesCS2B01G020100.1 | Wheat | peroxisome | 69.17 | 52.72 |
| CDX99621 | Canola | mitochondrion | 54.53 | 51.74 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 75.92 | 51.37 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 68.98 | 51.07 |
| Os02t0626600-00 | Rice | plasma membrane | 70.33 | 51.05 |
| Zm00001d017274_P001 | Maize | plasma membrane | 68.98 | 50.92 |
| EES12521 | Sorghum | cytosol | 68.79 | 50.78 |
| Zm00001d051161_P003 | Maize | plastid | 68.59 | 50.64 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 68.59 | 50.57 |
| Os04t0518100-01 | Rice | plasma membrane | 68.79 | 50.49 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 68.4 | 50.43 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 68.4 | 50.43 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 68.4 | 50.43 |
| Zm00001d033286_P001 | Maize | peroxisome | 67.05 | 49.86 |
| CDY18464 | Canola | peroxisome | 40.46 | 49.65 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 65.51 | 49.35 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 65.51 | 49.35 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 65.32 | 49.2 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 65.32 | 49.13 |
| Os12t0520200-01 | Rice | plasma membrane | 64.35 | 49.12 |
| HORVU2Hr1G038140.1 | Barley | mitochondrion, plastid | 68.4 | 49.1 |
| EER93773 | Sorghum | peroxisome | 66.09 | 48.38 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 43.35 | 48.28 |
| CDY61769 | Canola | peroxisome | 23.51 | 48.22 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 50.48 | 48.16 |
| HORVU2Hr1G062750.1 | Barley | mitochondrion | 16.96 | 47.83 |
| TraesCS3D01G016500.1 | Wheat | peroxisome | 63.2 | 47.61 |
| PGSC0003DMT400080765 | Potato | peroxisome | 39.69 | 47.36 |
| TraesCSU01G030700.1 | Wheat | peroxisome | 61.85 | 47.28 |
| Zm00001d003016_P001 | Maize | plastid | 69.56 | 45.75 |
| CDX74991 | Canola | peroxisome | 32.95 | 45.0 |
| CDX91331 | Canola | peroxisome | 32.95 | 45.0 |
| HORVU6Hr1G058820.2 | Barley | mitochondrion | 59.73 | 43.72 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 56.26 | 41.54 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 52.99 | 41.35 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 30.44 | 40.41 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 26.78 | 38.08 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 63.58 | 36.87 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 17.53 | 34.34 |
| TraesCS2B01G398300.2 | Wheat | peroxisome | 22.74 | 32.07 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 13.29 | 26.74 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 15.99 | 23.38 |
| Os12t0461300-00 | Rice | plastid | 9.83 | 20.16 |
| PGSC0003DMT400055529 | Potato | cytosol | 4.82 | 14.97 |
| Os08t0308300-00 | Rice | plastid | 3.47 | 9.57 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 0.39 | 1.15 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 | GO:A0A078JLX5 |
| UniProt:A0A078JLX5 | InterPro:Aromatic_Lyase | EnsemblPlants:CDY66761 | ProteinID:CDY66761 | ProteinID:CDY66761.1 | InterPro:Fumarase/histidase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009698 |
| GO:GO:0009800 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016841 | GO:GO:0019748 | GO:GO:0045548 |
| EnsemblPlantsGene:GSBRNA2T00055699001 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 | ScanProsite:PS00488 | PANTHER:PTHR10362 |
| PANTHER:PTHR10362:SF32 | MetaCyc:PWY-1121 | MetaCyc:PWY-5883 | MetaCyc:PWY-6444 | MetaCyc:PWY-6457 | InterPro:Phe/His_NH3-lyase_AS |
| InterPro:Phe_NH3-lyase | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniPathway:UPA00713 | UniParc:UPI0004EDD90F | : |
Description
BnaCnng52250DPhenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JLX5]
Coordinates
chrLK035450:-:12049..14832
Molecular Weight (calculated)
55701.9 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.105
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQINGSVHQ NGKIEAMLLC GVVEKTKVTV AADPLNWGAA AEQMKGSHLD EVKRMVEDYR KPVVNLGGET LTIGQVAAIS NVGGGVKVEL AEASRAGVKA
101: SSDWVMESMG KGTDSYGVTT GFGATSHRRT KNGAALQTEL IRFLNAGIFG NTKETCHTLP ESATRAAMLV RVNTLLQGYS GIRFEILEAI TSLLNHNISP
201: SLPLRGTITA SGDLVPLSYI AGLLTGRPNS KATGPNGESL TAEEAFKKAG ITSGFFDLQP KEGLALVNGT AVGSGMASMV LFEANVQSVL AEVLSAIFAE
301: VMSGKPEFTD HLTHRLKHHP GQIEAAAIME HILDGSSYMK LAQKLHEMDP LQKPKQDRYA LRTSPQWLGP QIEVIRHATK SIEREINSVN DNPLIDVSRN
401: KAIHGGNFQG TPIGVSMDNT RLAVAAIGKL MFAQFSELVN DFYNNGLPSN LTASNNPSLD YGFKGAEIAM ASYCSELQYL ANPVTSHFDK VFTAMCEGKI
501: IDPLMDCLKE WNGAPIPIC
101: SSDWVMESMG KGTDSYGVTT GFGATSHRRT KNGAALQTEL IRFLNAGIFG NTKETCHTLP ESATRAAMLV RVNTLLQGYS GIRFEILEAI TSLLNHNISP
201: SLPLRGTITA SGDLVPLSYI AGLLTGRPNS KATGPNGESL TAEEAFKKAG ITSGFFDLQP KEGLALVNGT AVGSGMASMV LFEANVQSVL AEVLSAIFAE
301: VMSGKPEFTD HLTHRLKHHP GQIEAAAIME HILDGSSYMK LAQKLHEMDP LQKPKQDRYA LRTSPQWLGP QIEVIRHATK SIEREINSVN DNPLIDVSRN
401: KAIHGGNFQG TPIGVSMDNT RLAVAAIGKL MFAQFSELVN DFYNNGLPSN LTASNNPSLD YGFKGAEIAM ASYCSELQYL ANPVTSHFDK VFTAMCEGKI
501: IDPLMDCLKE WNGAPIPIC
001: MDQIEAMLCG GGEKTKVAVT TKTLADPLNW GLAADQMKGS HLDEVKKMVE EYRRPVVNLG GETLTIGQVA AISTVGGSVK VELAETSRAG VKASSDWVME
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC
Arabidopsis Description
PAL2Phenylalanine ammonia-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P45724]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.