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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX74991
CDX91331
CDY00922
CDY08611
CDY18463
CDY18464

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 CDX74991 AT2G37040.1 21798944
AT2G37040.1 CDX91331 AT2G37040.1 21798944
AT2G37040.1 CDY18463 AT2G37040.1 21798944
AT2G37040.1 CDY18464 AT2G37040.1 21798944
AT2G37040.1 CDY00922 AT3G10340.1 21798944
AT2G37040.1 CDY08611 AT3G10340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g036480.1.1 Tomato peroxisome 20.33 84.31
PGSC0003DMT400080765 Potato peroxisome 84.4 82.07
PGSC0003DMT400055489 Potato mitochondrion 75.18 81.33
Solyc03g078280.1.1 Tomato peroxisome 47.28 77.52
Solyc03g042560.1.1 Tomato peroxisome 81.56 74.03
Solyc03g071860.2.1 Tomato endoplasmic reticulum 62.17 72.05
PGSC0003DMT400055529 Potato cytosol 28.37 71.86
TraesCS2A01G212600.1 Wheat cytosol 44.68 71.32
TraesCS2B01G398300.2 Wheat peroxisome 55.56 63.86
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 99.05 58.03
TraesCS1D01G039300.1 Wheat mitochondrion 71.87 57.69
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 97.16 56.69
CDX74991 Canola peroxisome 49.88 55.53
CDX91331 Canola peroxisome 49.65 55.26
CDX99621 Canola mitochondrion 70.92 54.84
TraesCS3B01G027800.1 Wheat mitochondrion 68.32 53.12
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 86.05 52.98
VIT_11s0016g01660.t01 Wine grape peroxisome 21.51 52.3
KRG91925 Soybean cytosol, peroxisome, plastid 85.82 50.63
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 82.27 50.51
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 84.4 50.21
TraesCS2D01G204400.1 Wheat peroxisome 78.96 50.0
Solyc10g086180.1.1 Tomato extracellular 83.92 49.93
Solyc09g007910.2.1 Tomato extracellular, nucleus 84.63 49.65
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 84.63 49.58
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 84.16 49.51
Solyc09g007920.2.1 Tomato extracellular, nucleus 84.16 49.38
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 83.92 49.24
CDY08611 Canola cytosol 82.03 49.15
GSMUA_Achr1P09070_001 Banana peroxisome 75.18 48.62
CDY00922 Canola cytosol 81.09 48.58
Solyc09g007890.1.1 Tomato plastid 82.27 48.4
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 74.47 48.31
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 74.7 48.24
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 74.0 48.08
GSMUA_Achr2P00240_001 Banana peroxisome 73.76 47.78
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 79.67 47.6
TraesCS2B01G224000.1 Wheat peroxisome 79.43 47.52
TraesCS2D01G377600.1 Wheat plastid 79.43 47.39
TraesCS2A01G381100.1 Wheat plastid 79.67 47.27
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 78.96 47.24
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 78.96 47.24
TraesCS2A01G381000.1 Wheat plastid 79.43 47.12
TraesCS2B01G398000.2 Wheat plastid 79.43 47.12
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 79.43 47.12
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 79.43 47.12
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 78.72 47.1
TraesCS2D01G204700.1 Wheat peroxisome 78.72 47.1
TraesCS2D01G218700.1 Wheat peroxisome 78.72 47.1
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 78.72 47.03
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 79.2 46.98
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 79.2 46.98
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 79.2 46.98
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 79.2 46.98
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 78.49 46.96
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 78.49 46.96
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 78.25 46.88
Os02t0626600-00 Rice plasma membrane 79.2 46.85
Zm00001d003015_P001 Maize peroxisome 79.2 46.85
TraesCS1D01G039400.1 Wheat golgi 78.25 46.82
TraesCS2A01G196700.1 Wheat peroxisome 78.25 46.82
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 78.96 46.78
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 78.96 46.78
Os02t0627100-01 Rice plasma membrane 78.72 46.7
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 78.72 46.7
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 78.01 46.68
OQU81984 Sorghum peroxisome 78.72 46.64
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 78.72 46.64
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 78.72 46.64
Zm00001d017276_P001 Maize peroxisome 77.54 46.59
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 78.49 46.56
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 78.49 46.56
Os02t0626400-01 Rice mitochondrion, plasma membrane 78.96 46.52
Os04t0518400-01 Rice extracellular, plasma membrane 78.49 46.5
Os05t0427400-00 Rice cytosol, peroxisome, plastid 78.49 46.37
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 78.01 46.22
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 78.01 46.15
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 72.81 46.11
EES05455 Sorghum cytosol, peroxisome, plastid 77.78 46.08
EES07176 Sorghum cytosol, peroxisome, plastid 77.78 46.08
EES07177 Sorghum cytosol, peroxisome, plastid 77.78 46.08
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 77.78 46.08
TraesCS6B01G258500.1 Wheat extracellular, unclear 77.78 46.08
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 77.54 46.07
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 77.54 46.07
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 78.72 46.06
GSMUA_Achr11P... Banana peroxisome 69.98 46.03
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 77.78 46.01
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 56.5 45.96
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 77.54 45.94
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 77.31 45.93
Os04t0518100-01 Rice plasma membrane 76.6 45.83
Zm00001d051166_P001 Maize extracellular 77.54 45.81
Zm00001d017275_P001 Maize extracellular 77.78 45.76
Zm00001d051163_P002 Maize peroxisome 77.54 45.68
TraesCS2B01G020100.1 Wheat peroxisome 73.29 45.52
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 64.54 45.42
EES07175 Sorghum cytosol, peroxisome, plastid 77.07 45.4
TraesCS6D01G212500.1 Wheat peroxisome 76.36 45.37
Os02t0626100-01 Rice extracellular, plasma membrane 74.0 44.65
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 74.23 44.6
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 74.23 44.6
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 74.23 44.6
EES12521 Sorghum cytosol 74.0 44.52
HORVU6Hr1G058820.2 Barley mitochondrion 74.23 44.29
Zm00001d017274_P001 Maize plasma membrane 73.52 44.24
EES07174 Sorghum cytosol, peroxisome, plastid 73.29 44.03
Zm00001d051161_P003 Maize plastid 73.05 43.95
HORVU2Hr1G089440.9 Barley plasma membrane 79.67 43.94
CDY15917 Canola cytosol, peroxisome, plastid 71.16 43.12
CDX73567 Canola cytosol 49.88 42.54
CDX78161 Canola cytosol 49.88 42.54
Zm00001d033286_P001 Maize peroxisome 69.98 42.41
TraesCS3D01G016300.1 Wheat peroxisome 68.79 42.24
CDX67566 Canola cytosol 48.94 42.16
TraesCS3B01G053900.1 Wheat peroxisome 68.56 42.09
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 68.32 41.88
TraesCS3A01G029200.1 Wheat peroxisome 68.09 41.8
Os12t0520200-01 Rice plasma membrane 67.14 41.76
TraesCSU01G030700.1 Wheat peroxisome 65.72 40.94
EER93773 Sorghum peroxisome 68.32 40.76
CDY66761 Canola cytosol, peroxisome, plastid 49.65 40.46
TraesCS3D01G016500.1 Wheat peroxisome 65.72 40.35
CDX76219 Canola cytosol 49.65 40.23
Zm00001d003016_P001 Maize plastid 74.0 39.67
TraesCS5B01G468400.1 Wheat peroxisome 50.83 38.95
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 45.39 38.55
Solyc03g078270.1.1 Tomato endoplasmic reticulum 13.0 37.93
GSMUA_Achr9P15990_001 Banana peroxisome 62.17 37.41
Os12t0461300-00 Rice plastid 22.22 37.15
VIT_11s0016g01640.t01 Wine grape peroxisome 55.79 35.49
HORVU2Hr1G089540.1 Barley peroxisome 37.35 33.69
Os08t0308300-00 Rice plastid 14.42 32.45
VIT_11s0016g01520.t01 Wine grape peroxisome 67.61 31.96
Zm00001d029015_P001 Maize peroxisome 29.31 31.16
CDY13306 Canola peroxisome 14.66 29.52
Solyc03g036470.1.1 Tomato mitochondrion 13.71 25.33
Zm00001d027249_P001 Maize peroxisome 10.4 19.73
CDY61769 Canola peroxisome 11.11 18.58
Zm00001d020933_P001 Maize mitochondrion 8.98 18.01
Zm00001d053619_P001 Maize mitochondrion 17.49 17.49
HORVU2Hr1G062750.1 Barley mitochondrion 2.6 5.98
VIT_11s0016g01510.t01 Wine grape peroxisome 4.73 5.63
CDY18463 Canola peroxisome 0.95 1.52
Zm00001d051164_P001 Maize peroxisome 0.47 1.27
Solyc03g071870.1.1 Tomato peroxisome 0.24 0.58
Solyc10g011920.1.1 Tomato cytosol 0.0 0.0
Solyc10g011930.1.1 Tomato cytosol 0.0 0.0
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.20.200.10MapMan:9.2.1.1.1GO:A0A078FZ39
UniProt:A0A078FZ39InterPro:Aromatic_LyaseEnsemblPlants:CDY18464ProteinID:CDY18464ProteinID:CDY18464.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0016841
EnsemblPlantsGene:GSBRNA2T00005466001InterPro:IPR023144InterPro:L-Aspartase-likePFAM:PF00221PANTHER:PTHR10362PANTHER:PTHR10362:SF32
MetaCyc:PWY-1121MetaCyc:PWY-5883MetaCyc:PWY-6444MetaCyc:PWY-6457InterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sf
SUPFAM:SSF48557TIGRFAMs:TIGR01226UniPathway:UPA00713UniParc:UPI0004EF04D1SEG:seg:
Description
BnaA04g21230DBnaA04g21230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ39]
Coordinates
chrLK032085:+:663966..665428
Molecular Weight (calculated)
47137.2 Da
IEP (calculated)
5.763
GRAVY (calculated)
-0.339
Length
423 amino acids
Sequence
(BLAST)
001: MSGKPEFTDH LTHRLKHHPG QIEAAAIMEH ILDGSSYMKL AQKLHEMDPL QKPKQDRYAL RTSPQWLGPQ IEVIRYATKS IEREINSVND NPLIDVSRNK
101: AIHGGNFQGT PIGVSMDNTR LAIAAIGKLM FAQFSELVND YYNNGLPSNL TASRNPSLDY GFKGAEIAMA SYCSELQYLA NPVTTHVQSA EQHNQDVNSL
201: GLISSRKTSE AVDILKLMST TFLVGICQAI DLRHLEENLK QTVKNTVSQV AKKVLTTGVN GELHPSRFCE KDLLKVVDRE QVYTYADDPC SATYPLIQKL
301: RQVIVDHALV NGESEKNAMT SIFHKIGAFE EELKAVLPDE VEAARVAYDN GTSAIPNRIK ECRSYPLYRF VREELGTELL TGEKATSPGE EFDKVFTAIC
401: EGKIIDPLME CLDEWNGAPI PIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.