Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G016300.1 | Wheat | peroxisome | 89.26 | 89.26 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 80.12 | 78.41 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 79.39 | 78.03 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 77.94 | 76.28 |
| Zm00001d051161_P003 | Maize | plastid | 77.79 | 76.24 |
| Zm00001d017274_P001 | Maize | plasma membrane | 77.5 | 75.96 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 10.6 | 71.57 |
| TraesCS2D01G204400.1 | Wheat | peroxisome | 65.46 | 67.52 |
| TraesCS1D01G039300.1 | Wheat | mitochondrion | 51.09 | 66.79 |
| TraesCS6D01G212500.1 | Wheat | peroxisome | 68.65 | 66.43 |
| TraesCS2D01G204700.1 | Wheat | peroxisome | 67.78 | 66.05 |
| TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 67.78 | 65.96 |
| TraesCS2D01G218700.1 | Wheat | peroxisome | 67.49 | 65.77 |
| CDY18464 | Canola | peroxisome | 40.35 | 65.72 |
| TraesCS2D01G377600.1 | Wheat | plastid | 67.2 | 65.3 |
| TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 67.2 | 64.94 |
| TraesCS1D01G039400.1 | Wheat | golgi | 66.62 | 64.92 |
| TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 67.05 | 64.8 |
| TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 67.05 | 64.71 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 36.72 | 64.71 |
| CDX67566 | Canola | cytosol | 46.01 | 64.56 |
| CDX78161 | Canola | cytosol | 46.44 | 64.52 |
| TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 66.62 | 64.38 |
| PGSC0003DMT400080765 | Potato | peroxisome | 40.64 | 64.37 |
| CDX73567 | Canola | cytosol | 46.3 | 64.31 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 64.01 | 64.19 |
| AT3G10340.1 | Thale cress | peroxisome | 65.75 | 64.07 |
| TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 66.33 | 64.01 |
| Solyc10g086180.1.1 | Tomato | extracellular | 65.89 | 63.85 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 21.19 | 63.76 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 43.11 | 63.73 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 65.6 | 63.57 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 47.61 | 63.2 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 63.13 | 63.13 |
| Bra029831.1-P | Field mustard | cytosol | 64.59 | 63.03 |
| CDY08611 | Canola | cytosol | 64.59 | 63.03 |
| CDY00922 | Canola | cytosol | 64.44 | 62.89 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 65.17 | 62.62 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 65.6 | 62.6 |
| CDX99621 | Canola | mitochondrion | 49.64 | 62.52 |
| CDX76219 | Canola | cytosol | 47.31 | 62.45 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 64.88 | 62.0 |
| AT3G53260.1 | Thale cress | cytosol | 64.44 | 61.92 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 64.59 | 61.89 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 64.73 | 61.86 |
| Bra003126.1-P | Field mustard | cytosol | 63.43 | 61.81 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 64.88 | 61.66 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 64.59 | 61.63 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 64.3 | 61.44 |
| Bra006985.1-P | Field mustard | cytosol | 62.55 | 61.05 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 22.64 | 60.47 |
| AT5G04230.2 | Thale cress | peroxisome | 61.25 | 60.46 |
| Bra039777.1-P | Field mustard | peroxisome | 44.56 | 60.2 |
| Solyc09g007890.1.1 | Tomato | plastid | 62.55 | 59.94 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 60.67 | 59.89 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 60.52 | 59.74 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 31.06 | 58.63 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 11.9 | 56.55 |
| CDY13306 | Canola | peroxisome | 17.13 | 56.19 |
| Bra005221.1-P | Field mustard | peroxisome | 29.46 | 54.72 |
| CDY18463 | Canola | peroxisome | 20.75 | 54.37 |
| CDX91331 | Canola | peroxisome | 29.17 | 52.89 |
| CDX74991 | Canola | peroxisome | 29.17 | 52.89 |
| Solyc10g011930.1.1 | Tomato | cytosol | 9.58 | 51.97 |
| Solyc10g011920.1.1 | Tomato | cytosol | 9.43 | 51.18 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 48.48 | 50.23 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 50.8 | 49.79 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 12.19 | 48.84 |
| PGSC0003DMT400055529 | Potato | cytosol | 11.61 | 47.9 |
| CDY61769 | Canola | peroxisome | 17.42 | 47.43 |
| Bra028793.1-P | Field mustard | peroxisome | 19.74 | 46.26 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 55.3 | 42.57 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 10.16 | 40.23 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 11.47 | 22.25 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 |
| EnsemblPlantsGene:TraesCS3D01G016500 | EnsemblPlants:TraesCS3D01G016500.1 | TIGR:cd00332 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3D:+:5790619..5794367
Molecular Weight (calculated)
74479.3 Da
IEP (calculated)
6.474
GRAVY (calculated)
0.084
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNGLIAEK DPLFWGAAAA ELTGSHLDEV KRMVAHFREP VVRIVGAGLS VGQVAAVAQA KDVSSVTVEL ADEARARVKA CSEWILDSVA NGGDIYGVTT
101: GFGGTSHRRT KDGHGLQVEL VRHLIAGIFG TGSDHEMPSE VTRASMLVRI NTLLQGFSGI RFEILEAITK LINKGVHPRI PLRGSITASG DVVPLAYIAG
201: VLTGRPNAQA ITHDGRKVDA AEAFKIAGID GGFFKLNPKE GLAIVNGTAA AAALAAMVLF DCNIFAVLSE VFSAMFCEVM YGKSEFADHL IHKLKHHPGT
301: IEAAAIMEHI LASSPFMVHG KMVNDMDPHL KPKQDRYAIR TAPQWLGPQI EVIRAATKCI EREVNSMSDN PVIDVHRGIA LHGGNFQGTP IGVSMDNTRL
401: AIASIGKLMF AQFSELVNEF YNNGLTSNLA GSRDPSLDYG LKGIEIAMAA YCSELQYLAN PVTTHVQSAE QHNQGVNSLG LVSARKTAEA VEMLKLMSST
501: YLVALCQAFD LRHLEQNIKI SVNICVAQAA KKVVDATSVE KKLAAAIDRV DVFRYADDPC SANYPLMHKL HSVLLEHALA SRSIDDEVLC KISKLEEELM
601: IALPREVEAA RVAVEKGTAP ISNMIMGSRS FPLYRFVREE LGCVFLTGEK LLAPGEECDK VFVGISQGKL IDPMLECLKE WNGEPLPIN
101: GFGGTSHRRT KDGHGLQVEL VRHLIAGIFG TGSDHEMPSE VTRASMLVRI NTLLQGFSGI RFEILEAITK LINKGVHPRI PLRGSITASG DVVPLAYIAG
201: VLTGRPNAQA ITHDGRKVDA AEAFKIAGID GGFFKLNPKE GLAIVNGTAA AAALAAMVLF DCNIFAVLSE VFSAMFCEVM YGKSEFADHL IHKLKHHPGT
301: IEAAAIMEHI LASSPFMVHG KMVNDMDPHL KPKQDRYAIR TAPQWLGPQI EVIRAATKCI EREVNSMSDN PVIDVHRGIA LHGGNFQGTP IGVSMDNTRL
401: AIASIGKLMF AQFSELVNEF YNNGLTSNLA GSRDPSLDYG LKGIEIAMAA YCSELQYLAN PVTTHVQSAE QHNQGVNSLG LVSARKTAEA VEMLKLMSST
501: YLVALCQAFD LRHLEQNIKI SVNICVAQAA KKVVDATSVE KKLAAAIDRV DVFRYADDPC SANYPLMHKL HSVLLEHALA SRSIDDEVLC KISKLEEELM
601: IALPREVEAA RVAVEKGTAP ISNMIMGSRS FPLYRFVREE LGCVFLTGEK LLAPGEECDK VFVGISQGKL IDPMLECLKE WNGEPLPIN
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.