Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 77.5 | 98.16 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 97.39 | 97.39 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 97.39 | 97.39 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 93.47 | 93.33 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 81.57 | 79.83 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 81.13 | 79.74 |
| Zm00001d051161_P003 | Maize | plastid | 79.97 | 78.38 |
| Zm00001d017274_P001 | Maize | plasma membrane | 79.83 | 78.24 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 79.68 | 77.98 |
| TraesCS1A01G094900.1 | Wheat | cytosol, peroxisome, plastid | 51.67 | 71.49 |
| CDY18464 | Canola | peroxisome | 41.8 | 68.09 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 69.38 | 67.61 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 69.38 | 67.61 |
| TraesCS6A01G222700.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.52 | 67.28 |
| CDX67566 | Canola | cytosol | 47.61 | 66.8 |
| CDX78161 | Canola | cytosol | 47.9 | 66.53 |
| CDX73567 | Canola | cytosol | 47.75 | 66.33 |
| TraesCS1A01G037800.1 | Wheat | cytosol, peroxisome, plastid | 68.65 | 66.25 |
| TraesCS6A01G222800.1 | Wheat | cytosol, peroxisome, plastid | 68.36 | 65.97 |
| TraesCS2A01G380800.1 | Wheat | cytosol, peroxisome, plastid | 68.21 | 65.92 |
| TraesCS2A01G381100.1 | Wheat | plastid | 68.07 | 65.78 |
| TraesCS2A01G381000.1 | Wheat | plastid | 68.07 | 65.78 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 67.49 | 65.77 |
| TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 63.57 | 65.57 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 49.35 | 65.51 |
| TraesCS2A01G380900.1 | Wheat | cytosol, peroxisome, plastid | 67.78 | 65.5 |
| TraesCS4A01G401300.1 | Wheat | cytosol, peroxisome, plastid | 67.78 | 65.5 |
| AT3G10340.1 | Thale cress | peroxisome | 67.2 | 65.49 |
| Bra029831.1-P | Field mustard | cytosol | 66.62 | 65.01 |
| CDY08611 | Canola | cytosol | 66.62 | 65.01 |
| CDX76219 | Canola | cytosol | 49.06 | 64.75 |
| CDY00922 | Canola | cytosol | 66.18 | 64.59 |
| CDX99621 | Canola | mitochondrion | 50.8 | 63.99 |
| Bra003126.1-P | Field mustard | cytosol | 65.6 | 63.93 |
| AT3G53260.1 | Thale cress | cytosol | 66.47 | 63.88 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 66.91 | 63.59 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 66.62 | 63.57 |
| Bra006985.1-P | Field mustard | cytosol | 64.44 | 62.89 |
| Bra039777.1-P | Field mustard | peroxisome | 46.15 | 62.35 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 23.8 | 61.89 |
| AT5G04230.2 | Thale cress | peroxisome | 62.41 | 61.6 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 61.39 | 60.6 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 61.25 | 60.46 |
| CDY13306 | Canola | peroxisome | 17.27 | 56.67 |
| Bra005221.1-P | Field mustard | peroxisome | 29.32 | 54.45 |
| CDY18463 | Canola | peroxisome | 20.61 | 53.99 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 50.94 | 52.78 |
| CDX91331 | Canola | peroxisome | 29.03 | 52.63 |
| CDX74991 | Canola | peroxisome | 29.03 | 52.63 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 53.12 | 52.06 |
| CDY61769 | Canola | peroxisome | 17.13 | 46.64 |
| Bra028793.1-P | Field mustard | peroxisome | 19.59 | 45.92 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 57.76 | 44.47 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.03 | 43.68 |
| TraesCS5A01G558600.1 | Wheat | mitochondrion | 18.87 | 31.03 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 12.05 | 23.38 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 |
| EnsemblPlantsGene:TraesCS3A01G029200 | EnsemblPlants:TraesCS3A01G029200.1 | TIGR:cd00332 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:15462390..15467475
Molecular Weight (calculated)
74425.3 Da
IEP (calculated)
6.640
GRAVY (calculated)
0.036
Length
689 amino acids
Sequence
(BLAST)
(BLAST)
001: MANNGFIAEK DPLHWGAAAA ELTGSHLDEV KRMVAHFREP VVRIVGAGLS VGQVAAVALA KDGSKVTVQL ADEARPRVKA CSEWILDSVA NGGDIYGVTT
101: GFGGTSHRRT KDGQGLQVEL VRHLIAGIFG IGSNHELPSE VTRASMLVRI NTLLQGYSGI RFEILEAITK LINKGVHPRI PLRGSITASG DVVPLAYIAG
201: VLTGRPNAQA VTNDGRMVDA AEALKIAGID GGFFKLNPKE GLAIVNGTAV GSALAAMVLF DCNVLAVLSE ILAAMFCEVM YGKLEYTDHL IHKLKHHPGS
301: IEAAAIMEHI LAGSSFMVHA KMVNAMDPLL KPKQDRYALR TAPQWLGPQI EVIRAATKSI EREVNSVNDN PVIDVKRGKA LHCGNFQGTP IGVSMDNTRL
401: AIANIGKLMF AQFSELVNEF YNNGLTSNLA GSRNPSLDYG LKGIEIAMAS YCSELQYLAN PVTTHVQSAE QHNQGVNSLG LISARKTAEA VDMLKLMSST
501: YIVALCQAVD LRHLERNIKI SVNRCVAEVA KKVLNAPSVE EILMAATDRV DVFSYADDPC STNYPLMHKL RSVLLEHALS SRGNDEEVLS KISKLEEELG
601: STLPREIEAA RIAVEKGTAP IPNMIKGSRS FPLYQFVREE LGCVFLTGEK LLAPGEECDK VFVGISQGKL IDPMLECLKE WNGEPLPID
101: GFGGTSHRRT KDGQGLQVEL VRHLIAGIFG IGSNHELPSE VTRASMLVRI NTLLQGYSGI RFEILEAITK LINKGVHPRI PLRGSITASG DVVPLAYIAG
201: VLTGRPNAQA VTNDGRMVDA AEALKIAGID GGFFKLNPKE GLAIVNGTAV GSALAAMVLF DCNVLAVLSE ILAAMFCEVM YGKLEYTDHL IHKLKHHPGS
301: IEAAAIMEHI LAGSSFMVHA KMVNAMDPLL KPKQDRYALR TAPQWLGPQI EVIRAATKSI EREVNSVNDN PVIDVKRGKA LHCGNFQGTP IGVSMDNTRL
401: AIANIGKLMF AQFSELVNEF YNNGLTSNLA GSRNPSLDYG LKGIEIAMAS YCSELQYLAN PVTTHVQSAE QHNQGVNSLG LISARKTAEA VDMLKLMSST
501: YIVALCQAVD LRHLERNIKI SVNRCVAEVA KKVLNAPSVE EILMAATDRV DVFSYADDPC STNYPLMHKL RSVLLEHALS SRGNDEEVLS KISKLEEELG
601: STLPREIEAA RIAVEKGTAP IPNMIKGSRS FPLYQFVREE LGCVFLTGEK LLAPGEECDK VFVGISQGKL IDPMLECLKE WNGEPLPID
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.