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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear, extracellular

Predictor Summary:
  • cytosol 3
  • vacuole 1
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, unclear
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 extracellular: 19786127
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 19786127 doi
FJ Kong, A Oyanagi, S Komatsu
National Institute of Crop Science, Tsukuba 305-8518, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G037700.1
TraesCS1A01G037800.1
TraesCS1A01G094900.1
TraesCS1B01G048100.1
TraesCS1B01G048200.1
TraesCS1B01G048300.1
TraesCS1B01G048400.2
TraesCS1B01G048500.1
TraesCS1B01G122800.1
TraesCS1D01G039300.1
TraesCS1D01G039400.1
TraesCS1D01G039500.1
TraesCS1D01G103500.1
TraesCS2A01G196400.1
TraesCS2A01G196700.1
TraesCS2A01G212600.1
TraesCS2A01G212900.1
TraesCS2A01G380800.1
TraesCS2A01G380900.1
TraesCS2A01G381000.1
TraesCS2A01G381100.1
TraesCS2B01G020100.1
TraesCS2B01G224000.1
TraesCS2B01G224300.1
TraesCS2B01G398000.2
TraesCS2B01G398100.1
TraesCS2B01G398200.1
TraesCS2B01G398300.2
TraesCS2B01G398400.1
TraesCS2D01G204400.1
TraesCS2D01G204700.1
TraesCS2D01G218700.1
TraesCS2D01G377200.1
TraesCS2D01G377400.1
TraesCS2D01G377500.1
TraesCS2D01G377600.1
TraesCS3A01G029200.1
TraesCS3B01G027800.1
TraesCS3B01G053900.1
TraesCS3D01G016300.1
TraesCS3D01G016500.1
TraesCS4A01G401300.1
TraesCS5B01G468300.1
TraesCS5B01G468400.1
TraesCS6A01G178900.1
TraesCS6A01G222700.1
TraesCS6A01G222800.1
TraesCS6A01G222900.1
TraesCS6B01G206300.1
TraesCS6B01G258400.2
TraesCS6B01G258500.1
TraesCS6B01G258600.1
TraesCS6D01G165600.1
TraesCS6D01G212200.1
TraesCS6D01G212400.1
TraesCS6D01G212500.1
TraesCS7B01G257400.1
TraesCS7D01G352400.1
TraesCSU01G030700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 TraesCS1A01G037700.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1A01G037800.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1A01G094900.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1B01G048100.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1B01G048200.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1B01G048300.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1B01G048400.2 AT2G37040.1 21798944
AT2G37040.1 TraesCS1B01G048500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1B01G122800.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1D01G039300.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1D01G039400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1D01G039500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1D01G103500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G196400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G196700.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G212600.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G212900.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G380800.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G380900.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G381000.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2A01G381100.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G020100.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G224000.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G224300.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G398000.2 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G398100.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G398200.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G398300.2 AT2G37040.1 21798944
AT2G37040.1 TraesCS2B01G398400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G204400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G204700.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G218700.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G377200.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G377400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G377500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS2D01G377600.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS3A01G029200.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS3B01G027800.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS3B01G053900.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS3D01G016300.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS3D01G016500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS4A01G401300.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS5B01G468300.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS5B01G468400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6A01G222700.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6A01G222800.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6A01G222900.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6B01G258400.2 AT2G37040.1 21798944
AT2G37040.1 TraesCS6B01G258500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6B01G258600.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6D01G212200.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6D01G212400.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS6D01G212500.1 AT2G37040.1 21798944
AT2G37040.1 TraesCSU01G030700.1 AT2G37040.1 21798944
AT2G37040.1 TraesCS1A01G037700.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1A01G037800.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1A01G094900.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1B01G048100.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1B01G048200.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1B01G048300.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1B01G048400.2 AT3G10340.1 21798944
AT2G37040.1 TraesCS1B01G048500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1B01G122800.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1D01G039300.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1D01G039400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1D01G039500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS1D01G103500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G196400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G196700.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G212600.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G212900.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G380800.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G380900.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G381000.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2A01G381100.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G020100.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G224000.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G224300.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G398000.2 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G398100.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G398200.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G398300.2 AT3G10340.1 21798944
AT2G37040.1 TraesCS2B01G398400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G204400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G204700.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G218700.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G377200.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G377400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G377500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS2D01G377600.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS3A01G029200.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS3B01G027800.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS3B01G053900.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS3D01G016300.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS3D01G016500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS4A01G401300.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS5B01G468300.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS5B01G468400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6A01G222700.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6A01G222800.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6A01G222900.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6B01G258400.2 AT3G10340.1 21798944
AT2G37040.1 TraesCS6B01G258500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6B01G258600.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6D01G212200.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6D01G212400.1 AT3G10340.1 21798944
AT2G37040.1 TraesCS6D01G212500.1 AT3G10340.1 21798944
AT2G37040.1 TraesCSU01G030700.1 AT3G10340.1 21798944
AT3G10340.1 TraesCS6A01G178900.1 AT1G15670.1 21798944
AT3G10340.1 TraesCS6B01G206300.1 AT1G15670.1 21798944
AT3G10340.1 TraesCS6D01G165600.1 AT1G15670.1 21798944
AT3G10340.1 TraesCS7B01G257400.1 AT1G15670.1 21798944
AT3G10340.1 TraesCS7D01G352400.1 AT1G15670.1 21798944
AT3G53260.1 TraesCS1A01G037700.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1A01G037800.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1A01G094900.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1B01G048100.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1B01G048200.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1B01G048300.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1B01G048400.2 AT3G10340.1 21798944
AT3G53260.1 TraesCS1B01G048500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1B01G122800.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1D01G039300.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1D01G039400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1D01G039500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1D01G103500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G196400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G196700.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G212600.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G212900.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G380800.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G380900.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G381000.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2A01G381100.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G020100.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G224000.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G224300.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G398000.2 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G398100.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G398200.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G398300.2 AT3G10340.1 21798944
AT3G53260.1 TraesCS2B01G398400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G204400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G204700.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G218700.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G377200.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G377400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G377500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS2D01G377600.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS3A01G029200.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS3B01G027800.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS3B01G053900.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS3D01G016300.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS3D01G016500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS4A01G401300.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS5B01G468300.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS5B01G468400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6A01G222700.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6A01G222800.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6A01G222900.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6B01G258400.2 AT3G10340.1 21798944
AT3G53260.1 TraesCS6B01G258500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6B01G258600.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6D01G212200.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6D01G212400.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS6D01G212500.1 AT3G10340.1 21798944
AT3G53260.1 TraesCSU01G030700.1 AT3G10340.1 21798944
AT3G53260.1 TraesCS1A01G037700.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1A01G037800.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1A01G094900.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1B01G048100.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1B01G048200.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1B01G048300.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1B01G048400.2 AT3G53260.1 21798944
AT3G53260.1 TraesCS1B01G048500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1B01G122800.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1D01G039300.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1D01G039400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1D01G039500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS1D01G103500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G196400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G196700.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G212600.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G212900.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G380800.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G380900.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G381000.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2A01G381100.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G020100.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G224000.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G224300.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G398000.2 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G398100.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G398200.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G398300.2 AT3G53260.1 21798944
AT3G53260.1 TraesCS2B01G398400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G204400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G204700.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G218700.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G377200.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G377400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G377500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS2D01G377600.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS3A01G029200.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS3B01G027800.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS3B01G053900.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS3D01G016300.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS3D01G016500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS4A01G401300.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS5B01G468300.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS5B01G468400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6A01G222700.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6A01G222800.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6A01G222900.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6B01G258400.2 AT3G53260.1 21798944
AT3G53260.1 TraesCS6B01G258500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6B01G258600.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6D01G212200.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6D01G212400.1 AT3G53260.1 21798944
AT3G53260.1 TraesCS6D01G212500.1 AT3G53260.1 21798944
AT3G53260.1 TraesCSU01G030700.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 99.86 99.86
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 99.57 99.57
Os02t0626100-01 Rice extracellular, plasma membrane 90.2 90.58
EES07174 Sorghum cytosol, peroxisome, plastid 89.2 89.2
Zm00001d051161_P003 Maize plastid 88.92 89.05
Zm00001d017274_P001 Maize plasma membrane 88.21 88.34
HORVU6Hr1G058820.2 Barley mitochondrion 88.21 87.59
TraesCS3D01G016300.1 Wheat peroxisome 79.97 81.71
TraesCS3D01G016500.1 Wheat peroxisome 78.41 80.12
Solyc03g036480.1.1 Tomato peroxisome 10.94 75.49
TraesCS2D01G204400.1 Wheat peroxisome 71.31 75.15
TraesCS1D01G039300.1 Wheat mitochondrion 55.82 74.57
CDY18464 Canola peroxisome 44.6 74.23
TraesCS2D01G204700.1 Wheat peroxisome 74.15 73.83
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 74.15 73.73
TraesCS2D01G218700.1 Wheat peroxisome 74.01 73.69
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 74.43 73.39
TraesCS6D01G212500.1 Wheat peroxisome 74.01 73.17
PGSC0003DMT400080765 Potato peroxisome 45.03 72.87
TraesCS2D01G377600.1 Wheat plastid 73.3 72.78
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 73.3 72.37
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 73.3 72.37
TraesCS1D01G039400.1 Wheat golgi 72.59 72.28
Solyc03g036470.1.1 Tomato mitochondrion 23.44 72.05
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 72.87 71.95
Solyc03g042560.1.1 Tomato peroxisome 47.59 71.89
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 72.73 71.71
PGSC0003DMT400055489 Potato mitochondrion 39.63 71.36
Solyc10g086180.1.1 Tomato extracellular 72.02 71.31
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 72.02 71.31
Solyc03g078280.1.1 Tomato peroxisome 25.99 70.93
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 68.75 70.45
AT3G10340.1 Thale cress peroxisome 70.6 70.3
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 71.45 69.67
CDX67566 Canola cytosol 48.58 69.65
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 67.9 69.38
CDX78161 Canola cytosol 48.86 69.35
KRG91925 Soybean cytosol, peroxisome, plastid 70.45 69.18
CDX73567 Canola cytosol 48.72 69.15
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 70.74 68.98
AT3G53260.1 Thale cress cytosol 69.89 68.62
Bra003126.1-P Field mustard cytosol 68.89 68.6
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 70.03 68.57
Bra029831.1-P Field mustard cytosol 68.61 68.41
CDY08611 Canola cytosol 68.61 68.41
CDY66761 Canola cytosol, peroxisome, plastid 50.43 68.4
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 70.03 68.38
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 70.31 68.28
CDY00922 Canola cytosol 68.47 68.27
Solyc09g007920.2.1 Tomato extracellular, nucleus 69.89 68.24
Bra006985.1-P Field mustard cytosol 68.18 67.99
Solyc09g007910.2.1 Tomato extracellular, nucleus 69.6 67.96
CDX99621 Canola mitochondrion 52.41 67.46
CDX76219 Canola cytosol 50.0 67.43
Solyc09g007890.1.1 Tomato plastid 67.9 66.48
Solyc03g071860.2.1 Tomato endoplasmic reticulum 34.23 66.03
Bra039777.1-P Field mustard peroxisome 47.3 65.29
AT5G04230.2 Thale cress peroxisome 63.92 64.47
CDY15917 Canola cytosol, peroxisome, plastid 63.35 63.9
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 63.07 63.61
Solyc03g078270.1.1 Tomato endoplasmic reticulum 12.78 62.07
Bra005221.1-P Field mustard peroxisome 32.39 61.46
CDX91331 Canola peroxisome 32.1 59.47
CDX74991 Canola peroxisome 32.1 59.47
CDY13306 Canola peroxisome 17.47 58.57
CDY18463 Canola peroxisome 21.73 58.17
PGSC0003DMT400055529 Potato cytosol 13.35 56.29
VIT_11s0016g01640.t01 Wine grape peroxisome 53.12 56.24
GSMUA_Achr9P15990_001 Banana peroxisome 55.26 55.33
Solyc10g011920.1.1 Tomato cytosol 9.52 52.76
Solyc10g011930.1.1 Tomato cytosol 9.52 52.76
Solyc03g071870.1.1 Tomato peroxisome 12.36 50.58
VIT_11s0016g01660.t01 Wine grape peroxisome 12.36 50.0
CDY61769 Canola peroxisome 17.33 48.22
Bra028793.1-P Field mustard peroxisome 20.03 47.96
VIT_11s0016g01520.t01 Wine grape peroxisome 60.51 47.6
VIT_11s0016g01510.t01 Wine grape peroxisome 12.78 25.35
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016841InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likePFAM:PF00221
ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF11InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sf
SUPFAM:SSF48557TIGRFAMs:TIGR01226EnsemblPlantsGene:TraesCS6D01G212200EnsemblPlants:TraesCS6D01G212200.1TIGR:cd00332SEG:seg
Description
No Description!
Coordinates
chr6D:-:300327283..300330453
Molecular Weight (calculated)
75623.7 Da
IEP (calculated)
6.216
GRAVY (calculated)
-0.063
Length
704 amino acids
Sequence
(BLAST)
001: MAGNGAIVEK DPLNWGAAAA ELTGSHLDEV KRMVAQFREP VVKIEGASLR VGQVAAVAQA KDASGVSVEL DEEARPRVKA SSEWILSCLA GGGDIYGVTT
101: GFGGTSHRRT KDGPALQVEL LRHLNAGIFG PGADGHSLPA EVSRAAMLVR INTLLQGYSG IRFEILEAIT KLINTGVSPC LPLRGTITAS GDLVPLSYIA
201: GLITGRPNAQ ATTVDGKKVD AAEAFKAAGI EGGFFKLNPK EGLAIVNGTS VGSALAATVL FDCNVLAVLS EVLSAVFCEV MNGKPEFTDH LTHKLKHHPG
301: SIEAAAIMEH ILAGSAFMGH AKKVNEIDTQ LKPKQDRYAL RTSPQWLGPQ IEVIRSATKS IEREVNSVND NPVIDVHRGK ALHGGNFQGT PIGVSMDNTR
401: LAIANIGKLM FAQFSELVNE FYNNGLTSNL AGSRNPSLDY GFKGTEIAMA SYCSELQYLA NPVTNHVQSA EQHNQDVNSL GLVSARKTAE AVDILKLMSS
501: TYMVALCQAI DLRHLEENIK TSVKNCVTQV SKKVLTMNPT GDLSSARFSE KSLITAIDRE AVFSYADDAC SANYPLMQKL RAVLVDHALT AGPGEAESEA
601: TVFSKINKFE EELRSALPRE IEAARVAFEN GTAPIPNLIK ESRSFPLYRF VREELGCVYL TGEKLLSPGE ECTKVFLGIS QNKLIDPMLE CLKEWNGEPL
701: PINV
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.