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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67566
CDX69512
CDX73567
CDX76219
CDX78161
CDX85544
CDX90984
CDY00922
CDY08611
CDY13306
CDY26443
CDY66761

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G53260.1 CDY00922 AT3G10340.1 21798944
AT3G53260.1 CDY08611 AT3G10340.1 21798944
AT3G53260.1 CDX67566 AT3G53260.1 21798944
AT3G53260.1 CDX73567 AT3G53260.1 21798944
AT3G53260.1 CDX76219 AT3G53260.1 21798944
AT3G53260.1 CDX78161 AT3G53260.1 21798944
AT3G53260.1 CDY13306 AT3G53260.1 21798944
AT3G53260.1 CDY66761 AT3G53260.1 21798944
AT3G53260.1 CDX69512 AT5G15600.1 21798944
AT3G53260.1 CDX85544 AT5G15600.1 21798944
AT3G53260.1 CDX90984 AT5G15600.1 21798944
AT3G53260.1 CDY26443 AT5G15600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g011930.1.1 Tomato cytosol 35.71 59.06
Solyc10g011920.1.1 Tomato cytosol 35.24 58.27
Zm00001d051164_P001 Maize peroxisome 38.1 50.96
Solyc03g071870.1.1 Tomato peroxisome 40.48 49.42
CDY18463 Canola peroxisome 54.76 43.73
HORVU2Hr1G062750.1 Barley mitochondrion 37.14 42.39
CDX67566 Canola cytosol 98.1 41.96
CDX78161 Canola cytosol 96.19 40.73
CDX73567 Canola cytosol 95.71 40.52
CDX74991 Canola peroxisome 70.95 39.21
CDX91331 Canola peroxisome 70.95 39.21
CDY66761 Canola cytosol, peroxisome, plastid 94.76 38.34
CDX76219 Canola cytosol 93.81 37.74
CDY61769 Canola peroxisome 38.57 32.02
Zm00001d027249_P001 Maize peroxisome 29.05 27.35
AT3G53260.1 Thale cress cytosol 90.48 26.5
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 55.24 23.29
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 66.19 23.13
HORVU2Hr1G089540.1 Barley peroxisome 50.0 22.39
GSMUA_Achr1P09070_001 Banana peroxisome 69.05 22.17
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 69.05 22.14
Zm00001d029015_P001 Maize peroxisome 41.9 22.11
KRG91925 Soybean cytosol, peroxisome, plastid 75.24 22.04
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 68.1 21.93
TraesCS5B01G468400.1 Wheat peroxisome 57.14 21.74
CDY00922 Canola cytosol 72.86 21.67
CDY08611 Canola cytosol 72.86 21.67
GSMUA_Achr2P00240_001 Banana peroxisome 67.14 21.59
Zm00001d053619_P001 Maize mitochondrion 43.33 21.51
TraesCS2B01G398300.2 Wheat peroxisome 37.62 21.47
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 71.9 21.24
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 65.71 21.2
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 69.05 21.11
Solyc09g007910.2.1 Tomato extracellular, nucleus 72.38 21.08
Solyc10g086180.1.1 Tomato extracellular 70.95 20.96
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 71.9 20.94
Solyc09g007920.2.1 Tomato extracellular, nucleus 71.9 20.94
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 71.43 20.86
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 71.43 20.78
Solyc09g007890.1.1 Tomato plastid 70.95 20.72
GSMUA_Achr11P... Banana peroxisome 61.43 20.06
Os04t0518400-01 Rice extracellular, plasma membrane 67.62 19.89
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 66.19 19.66
TraesCS1D01G039400.1 Wheat golgi 66.19 19.66
Os05t0427400-00 Rice cytosol, peroxisome, plastid 66.67 19.55
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 65.71 19.52
TraesCS2A01G196700.1 Wheat peroxisome 65.71 19.52
TraesCS2B01G224000.1 Wheat peroxisome 65.71 19.52
TraesCS2D01G204700.1 Wheat peroxisome 65.71 19.52
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 65.71 19.49
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 65.71 19.49
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 66.19 19.47
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 66.19 19.47
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 65.24 19.41
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 65.24 19.38
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 65.24 19.38
TraesCS2D01G218700.1 Wheat peroxisome 65.24 19.38
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 65.24 19.38
Os02t0627100-01 Rice plasma membrane 65.71 19.35
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 65.71 19.35
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 65.71 19.35
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 65.71 19.35
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 65.71 19.33
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 65.71 19.33
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 65.71 19.33
TraesCS2D01G377600.1 Wheat plastid 65.24 19.32
Zm00001d017276_P001 Maize peroxisome 64.76 19.32
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 65.71 19.3
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 65.24 19.24
TraesCS6D01G212500.1 Wheat peroxisome 65.24 19.24
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 64.76 19.24
TraesCS2A01G381000.1 Wheat plastid 65.24 19.21
TraesCS2B01G398000.2 Wheat plastid 65.24 19.21
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 65.24 19.21
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 65.24 19.21
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 65.24 19.21
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 65.24 19.21
EES05455 Sorghum cytosol, peroxisome, plastid 65.24 19.19
EES07176 Sorghum cytosol, peroxisome, plastid 65.24 19.19
EES07177 Sorghum cytosol, peroxisome, plastid 65.24 19.19
Zm00001d003015_P001 Maize peroxisome 65.24 19.16
Zm00001d051166_P001 Maize extracellular 65.24 19.13
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 64.76 19.1
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 64.76 19.07
TraesCS2A01G381100.1 Wheat plastid 64.76 19.07
OQU81984 Sorghum peroxisome 64.76 19.05
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 64.29 18.96
Os02t0626400-01 Rice mitochondrion, plasma membrane 64.76 18.94
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 64.29 18.93
Zm00001d017275_P001 Maize extracellular 64.29 18.78
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 61.43 18.72
CDY15917 Canola cytosol, peroxisome, plastid 61.9 18.62
EES07175 Sorghum cytosol, peroxisome, plastid 63.33 18.52
Zm00001d051163_P002 Maize peroxisome 63.33 18.52
TraesCS6B01G258500.1 Wheat extracellular, unclear 62.38 18.35
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 62.38 18.32
VIT_11s0016g01510.t01 Wine grape peroxisome 30.95 18.31
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 61.43 18.07
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 61.43 18.07
HORVU2Hr1G089440.9 Barley plasma membrane 65.71 17.99
Os02t0626100-01 Rice extracellular, plasma membrane 59.52 17.83
TraesCS2D01G204400.1 Wheat peroxisome 56.19 17.66
Solyc03g036480.1.1 Tomato peroxisome 8.57 17.65
EES12521 Sorghum cytosol 59.05 17.64
TraesCS2B01G020100.1 Wheat peroxisome 57.14 17.62
Os04t0518100-01 Rice plasma membrane 59.05 17.54
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 58.57 17.47
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 58.57 17.47
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 58.1 17.33
TraesCS3A01G029200.1 Wheat peroxisome 56.67 17.27
TraesCS3B01G053900.1 Wheat peroxisome 56.67 17.27
TraesCS3D01G016300.1 Wheat peroxisome 56.67 17.27
Zm00001d017274_P001 Maize plasma membrane 57.62 17.21
Zm00001d051161_P003 Maize plastid 57.62 17.21
EES07174 Sorghum cytosol, peroxisome, plastid 57.62 17.19
TraesCS3D01G016500.1 Wheat peroxisome 56.19 17.13
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 56.19 17.1
Zm00001d033286_P001 Maize peroxisome 55.71 16.76
TraesCSU01G030700.1 Wheat peroxisome 53.81 16.64
Os02t0626600-00 Rice plasma membrane 55.24 16.22
Zm00001d003016_P001 Maize plastid 60.0 15.97
Os12t0520200-01 Rice plasma membrane 51.43 15.88
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 50.48 15.87
EER93773 Sorghum peroxisome 53.33 15.8
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 38.57 15.58
PGSC0003DMT400055529 Potato cytosol 11.9 14.97
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 50.48 14.66
CDY18464 Canola peroxisome 29.52 14.66
VIT_11s0016g01640.t01 Wine grape peroxisome 45.24 14.29
PGSC0003DMT400055489 Potato mitochondrion 26.19 14.07
PGSC0003DMT400080765 Potato peroxisome 26.19 12.64
VIT_11s0016g01520.t01 Wine grape peroxisome 51.43 12.07
Os12t0461300-00 Rice plastid 14.29 11.86
Solyc03g042560.1.1 Tomato peroxisome 26.19 11.8
Solyc03g078280.1.1 Tomato peroxisome 14.29 11.63
Zm00001d020933_P001 Maize mitochondrion 11.43 11.37
HORVU6Hr1G058820.2 Barley mitochondrion 37.62 11.14
GSMUA_Achr9P15990_001 Banana peroxisome 36.67 10.95
TraesCS2A01G212600.1 Wheat cytosol 13.81 10.94
TraesCS1D01G039300.1 Wheat mitochondrion 23.33 9.3
TraesCS3B01G027800.1 Wheat mitochondrion 23.33 9.01
CDX99621 Canola mitochondrion 23.33 8.96
Solyc03g071860.2.1 Tomato endoplasmic reticulum 13.81 7.95
Os08t0308300-00 Rice plastid 4.76 5.32
Solyc03g036470.1.1 Tomato mitochondrion 4.29 3.93
Solyc03g078270.1.1 Tomato endoplasmic reticulum 1.43 2.07
VIT_11s0016g01660.t01 Wine grape peroxisome 0.0 0.0
Protein Annotations
EnsemblPlants:CDY13306EnsemblPlantsGene:GSBRNA2T00071293001Gene3D:1.10.275.10Gene3D:1.20.200.10GO:A0A078FJD0GO:GO:0003674
GO:GO:0003824InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NInterPro:IPR024083InterPro:L-Aspartase-likePANTHER:PTHR10362
PANTHER:PTHR10362:SF30PFAM:PF00221ProteinID:CDY13306ProteinID:CDY13306.1SUPFAM:SSF48557UniParc:UPI0004EF0CE1
UniProt:A0A078FJD0MapMan:35.1::::
Description
BnaC06g14510DBnaC06g14510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJD0]
Coordinates
chrLK032034:+:180858..183943
Molecular Weight (calculated)
22489.7 Da
IEP (calculated)
4.650
GRAVY (calculated)
-0.158
Length
210 amino acids
Sequence
(BLAST)
001: MDQTQNDNIE AMLCGGVEKT NVAVAADPLN WGAAAEQMKG SHLDEVKRMV EEYRRPVVNL GGETLTIGQV AAISTVGNGV KVELAEASRD GVKASSDWVM
101: ESMGKGTDSY GVTTGFGATS HRRTKNGAAL QTELIRFLNA GIFASNNPSL DYGFKGAEIA MASYCSELQY LANPVTSHFD KVFTAMCEGK IIDPLMDCLK
201: EWNGAPIPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.