Factsheet for Os05t0427400-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0208700-00
Os02t0626100-01
Os02t0626400-01
Os02t0626600-00
Os02t0627100-01
Os04t0518100-01
Os04t0518400-01
Os05t0427400-00
Os06t0594400-02
Os08t0308300-00
Os12t0461300-00
Os12t0520200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Os02t0626100-01	AT2G37040.1	21798944
AT2G37040.1	Os02t0626400-01	AT2G37040.1	21798944
AT2G37040.1	Os02t0626600-00	AT2G37040.1	21798944
AT2G37040.1	Os02t0627100-01	AT2G37040.1	21798944
AT2G37040.1	Os04t0518100-01	AT2G37040.1	21798944
AT2G37040.1	Os04t0518400-01	AT2G37040.1	21798944
AT2G37040.1	Os05t0427400-00	AT2G37040.1	21798944
AT2G37040.1	Os08t0308300-00	AT2G37040.1	21798944
AT2G37040.1	Os12t0461300-00	AT2G37040.1	21798944
AT2G37040.1	Os12t0520200-01	AT2G37040.1	21798944
AT2G37040.1	Os02t0626100-01	AT3G10340.1	21798944
AT2G37040.1	Os02t0626400-01	AT3G10340.1	21798944
AT2G37040.1	Os02t0626600-00	AT3G10340.1	21798944
AT2G37040.1	Os02t0627100-01	AT3G10340.1	21798944
AT2G37040.1	Os04t0518100-01	AT3G10340.1	21798944
AT2G37040.1	Os04t0518400-01	AT3G10340.1	21798944
AT2G37040.1	Os05t0427400-00	AT3G10340.1	21798944
AT2G37040.1	Os08t0308300-00	AT3G10340.1	21798944
AT2G37040.1	Os12t0461300-00	AT3G10340.1	21798944
AT2G37040.1	Os12t0520200-01	AT3G10340.1	21798944
AT3G10340.1	Os02t0208700-00	AT1G15670.1	21798944
AT3G10340.1	Os06t0594400-02	AT1G15670.1	21798944
AT3G53260.1	Os02t0626100-01	AT3G10340.1	21798944
AT3G53260.1	Os02t0626400-01	AT3G10340.1	21798944
AT3G53260.1	Os02t0626600-00	AT3G10340.1	21798944
AT3G53260.1	Os02t0627100-01	AT3G10340.1	21798944
AT3G53260.1	Os04t0518100-01	AT3G10340.1	21798944
AT3G53260.1	Os04t0518400-01	AT3G10340.1	21798944
AT3G53260.1	Os05t0427400-00	AT3G10340.1	21798944
AT3G53260.1	Os08t0308300-00	AT3G10340.1	21798944
AT3G53260.1	Os12t0461300-00	AT3G10340.1	21798944
AT3G53260.1	Os12t0520200-01	AT3G10340.1	21798944
AT3G53260.1	Os02t0626100-01	AT3G53260.1	21798944
AT3G53260.1	Os02t0626400-01	AT3G53260.1	21798944
AT3G53260.1	Os02t0626600-00	AT3G53260.1	21798944
AT3G53260.1	Os02t0627100-01	AT3G53260.1	21798944
AT3G53260.1	Os04t0518100-01	AT3G53260.1	21798944
AT3G53260.1	Os04t0518400-01	AT3G53260.1	21798944
AT3G53260.1	Os05t0427400-00	AT3G53260.1	21798944
AT3G53260.1	Os08t0308300-00	AT3G53260.1	21798944
AT3G53260.1	Os12t0461300-00	AT3G53260.1	21798944
AT3G53260.1	Os12t0520200-01	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0627100-01	Rice	plasma membrane	92.74	93.13
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	91.06	91.57
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	89.94	90.45
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	89.66	90.17
TraesCS6D01G212500.1	Wheat	peroxisome	88.83	89.33
Os04t0518400-01	Rice	extracellular, plasma membrane	88.97	89.22
Os02t0626400-01	Rice	mitochondrion, plasma membrane	88.97	88.72
Os02t0626600-00	Rice	plasma membrane	86.87	86.99
Solyc03g036480.1.1	Tomato	peroxisome	11.73	82.35
CDY18464	Canola	peroxisome	46.37	78.49
Solyc03g036470.1.1	Tomato	mitochondrion	25.0	78.17
PGSC0003DMT400080765	Potato	peroxisome	47.07	77.47
Os04t0518100-01	Rice	plasma membrane	75.84	76.8
Os02t0626100-01	Rice	extracellular, plasma membrane	75.0	76.6
Solyc03g042560.1.1	Tomato	peroxisome	49.72	76.39
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	73.18	76.27
Os12t0520200-01	Rice	plasma membrane	72.35	76.18
CDX67566	Canola	cytosol	52.23	76.17
PGSC0003DMT400055489	Potato	mitochondrion	41.48	75.96
Solyc10g086180.1.1	Tomato	extracellular	75.28	75.81
CDX78161	Canola	cytosol	52.37	75.6
CDX73567	Canola	cytosol	52.23	75.4
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	74.86	75.39
AT3G10340.1	Thale cress	peroxisome	74.16	75.11
CDY00922	Canola	cytosol	73.88	74.93
Bra029831.1-P	Field mustard	cytosol	73.74	74.79
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	75.28	74.65
KRG91925	Soybean	cytosol, peroxisome, plastid	74.72	74.62
CDY66761	Canola	cytosol, peroxisome, plastid	54.05	74.57
CDY08611	Canola	cytosol	73.46	74.5
Bra003126.1-P	Field mustard	cytosol	73.46	74.4
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	74.72	74.1
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	74.58	74.06
Solyc09g007910.2.1	Tomato	extracellular, nucleus	74.44	73.93
Solyc09g007920.2.1	Tomato	extracellular, nucleus	74.44	73.93
CDX76219	Canola	cytosol	53.77	73.75
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	70.95	73.73
AT3G53260.1	Thale cress	cytosol	73.74	73.64
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	73.88	73.57
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	74.3	73.38
Bra006985.1-P	Field mustard	cytosol	72.21	73.23
Solyc09g007890.1.1	Tomato	plastid	72.77	72.46
Bra039777.1-P	Field mustard	peroxisome	50.56	70.98
CDX99621	Canola	mitochondrion	54.05	70.75
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	36.03	70.68
Solyc03g078280.1.1	Tomato	peroxisome	25.42	70.54
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	13.97	68.97
AT5G04230.2	Thale cress	peroxisome	67.18	68.91
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	65.78	67.48
CDY15917	Canola	cytosol, peroxisome, plastid	65.64	67.34
Bra005221.1-P	Field mustard	peroxisome	34.78	67.12
CDY13306	Canola	peroxisome	19.55	66.67
CDX91331	Canola	peroxisome	34.5	65.0
CDX74991	Canola	peroxisome	34.5	65.0
CDY18463	Canola	peroxisome	23.6	64.26
PGSC0003DMT400055529	Potato	cytosol	14.53	62.28
VIT_11s0016g01640.t01	Wine grape	peroxisome	53.63	57.74
Solyc03g071870.1.1	Tomato	peroxisome	13.83	57.56
GSMUA_Achr9P15990_001	Banana	peroxisome	55.17	56.19
Solyc10g011930.1.1	Tomato	cytosol	9.78	55.12
Solyc10g011920.1.1	Tomato	cytosol	9.64	54.33
CDY61769	Canola	peroxisome	19.13	54.15
Bra028793.1-P	Field mustard	peroxisome	22.21	54.08
Os12t0461300-00	Rice	plastid	18.72	52.96
VIT_11s0016g01520.t01	Wine grape	peroxisome	61.87	49.5
VIT_11s0016g01660.t01	Wine grape	peroxisome	11.87	48.85
Os08t0308300-00	Rice	plastid	11.45	43.62
VIT_11s0016g01510.t01	Wine grape	peroxisome	13.41	27.04

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	EntrezGene:4338861
MapMan:9.2.1.1.1	ProteinID:AAS90660.1	ProteinID:AAV25018.1	InterPro:Aromatic_Lyase	ProteinID:BAF17522.1	ProteinID:BAS94130.1
ProteinID:EEE63795.1	InterPro:Fumarase/histidase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006559	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009698	GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841
GO:GO:0019748	GO:GO:0045548	InterPro:IPR023144	InterPro:IPR024083	InterPro:L-Aspartase-like	EnsemblPlantsGene:Os05g0427400
EnsemblPlants:Os05t0427400-00	PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF31	InterPro:Phe/His_NH3-lyase_AS
InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	UniProt:Q75HQ7	SUPFAM:SSF48557	TIGRFAMs:TIGR01226	UniParc:UPI00003589DD
RefSeq:XP_015640196.1	SEG:seg	:	:	:	:

Description

Phenylalanine ammonia lyaseSimilar to Phenylalanine ammonia-lyase. (Os05t0427400-00)

Coordinates

chr5:-:20953643..20955793

Molecular Weight (calculated)

76703.0 Da

IEP (calculated)

5.942

GRAVY (calculated)

-0.070

Length

716 amino acids

Sequence
(BLAST)

001: MECETGYVAA AADGGLCMEV PRADPLNWGK AAEEMAGSHL DEVKRMVAEY RQPVVRIEGA SLRIAQVAAV AGAGDGEAAM VELDESARER VKASSDWVMN
101: SMANGTDSYG VTTGFGATSH RRTKEGGALQ RELIRFLNAG AFGTGADGHV LPAGATRAAM LVRINTLLQG YSGIRFEILE AVAKLLNANV TPCLPLRGTI
201: TASGDLVPLS YIAGLVTGRE NSVAVAPDGR KVNAAEAFKI AGIQGGFFEL QPKEGLAMVN GTAVGSGLAS TVLFEANVLA ILAEVLSAVF CEVMNGKPEY
301: TDHLTHKLKH HPGQIEAAAI MEHILEGSSY MKEAKRLGEL DPLMKPKQDR YALRTSPQWL GPQIEVIRAA TKSIEREINS VNDNPLIDVS RGKALHGGNF
401: QGTPIGVSMD NTRLAIAAIG KLMFAQFSEL VNDFYNNGLP SNLSGGRNPS LDYGFKGAEI AMASYCSELQ FLGNPVTNHV QSAEQHNQDV NSLGLISSRK
501: TAEAIDILKL MSSTFLVALC QAIDLRHIEE NVKGAVKTCV MTVAKKTLST NSTGGLHVAR FCEKDLLSEI DREAVFAYAD DPCSANYPLM KKLRSVLVER
601: ALANGAAEFD AETSVLAKVA RFEEELRAAL PRAVEAARAA VESGTAAAPN RIAECRSYPL YRFVREELGT AYLTGEKTRS PGEELNKVLV AINQGKHIDP
701: LLECLKEWNG APLPIC

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.