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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 3
  • plastid 2
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra005221.1-P
Bra017210.1-P
Bra029831.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 Bra005221.1-P AT2G37040.1 21798944
AT2G37040.1 Bra017210.1-P AT2G37040.1 21798944
AT2G37040.1 Bra029831.1-P AT3G10340.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18464 Canola peroxisome 58.03 99.05
Bra005221.1-P Field mustard peroxisome 49.17 95.69
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 95.29 94.9
Bra003126.1-P Field mustard cytosol 89.34 91.23
Bra006985.1-P Field mustard cytosol 88.09 90.08
CDY18463 Canola peroxisome 31.72 87.07
Bra039777.1-P Field mustard peroxisome 60.39 85.49
PGSC0003DMT400080765 Potato peroxisome 50.97 84.6
Solyc03g036480.1.1 Tomato peroxisome 11.91 84.31
Solyc03g036470.1.1 Tomato mitochondrion 26.73 84.28
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 78.67 82.68
Solyc09g007910.2.1 Tomato extracellular, nucleus 82.41 82.52
Solyc09g007920.2.1 Tomato extracellular, nucleus 82.13 82.25
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 81.99 82.11
PGSC0003DMT400055489 Potato mitochondrion 44.32 81.84
Solyc03g042560.1.1 Tomato peroxisome 52.77 81.76
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 81.72 81.72
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 80.33 81.58
GSMUA_Achr1P09070_001 Banana peroxisome 73.68 81.35
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 80.75 81.08
KRG91925 Soybean cytosol, peroxisome, plastid 80.47 81.03
Solyc10g086180.1.1 Tomato extracellular 79.78 81.01
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 73.41 80.92
Solyc09g007890.1.1 Tomato plastid 80.47 80.81
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 72.85 80.8
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 72.71 80.52
Bra029831.1-P Field mustard cytosol 78.67 80.45
GSMUA_Achr2P00240_001 Banana peroxisome 72.58 80.25
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 66.34 79.7
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 75.76 79.39
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 54.16 78.51
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 56.51 78.46
TraesCS1D01G039300.1 Wheat mitochondrion 57.06 78.18
Solyc03g078280.1.1 Tomato peroxisome 27.7 77.52
GSMUA_Achr11P... Banana peroxisome 68.84 77.29
HORVU2Hr1G089540.1 Barley peroxisome 50.0 76.97
TraesCS2D01G204400.1 Wheat peroxisome 71.05 76.8
TraesCS2D01G377600.1 Wheat plastid 75.07 76.45
Solyc03g071860.2.1 Tomato endoplasmic reticulum 38.64 76.44
TraesCS2B01G224000.1 Wheat peroxisome 74.52 76.1
TraesCS2A01G381100.1 Wheat plastid 75.07 76.02
TraesCS2B01G398000.2 Wheat plastid 75.07 76.02
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 75.07 76.02
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 74.38 75.95
Os04t0518400-01 Rice extracellular, plasma membrane 75.07 75.91
TraesCS5B01G468400.1 Wheat peroxisome 58.03 75.91
TraesCS2A01G381000.1 Wheat plastid 74.93 75.88
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 74.93 75.88
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 74.93 75.88
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 74.93 75.88
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 74.38 75.85
TraesCS2D01G204700.1 Wheat peroxisome 74.24 75.81
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 74.24 75.71
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 74.1 75.67
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 74.1 75.67
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 74.65 75.6
Zm00001d017276_P001 Maize peroxisome 73.68 75.57
TraesCS1D01G039400.1 Wheat golgi 73.96 75.53
Zm00001d003015_P001 Maize peroxisome 74.79 75.52
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 73.82 75.5
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 74.65 75.49
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 74.65 75.49
Os02t0627100-01 Rice plasma membrane 74.52 75.46
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 74.52 75.46
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 74.52 75.46
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 74.52 75.46
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 73.82 75.39
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 73.82 75.39
TraesCS2D01G218700.1 Wheat peroxisome 73.82 75.39
OQU81984 Sorghum peroxisome 74.52 75.35
Os02t0626400-01 Rice mitochondrion, plasma membrane 74.93 75.35
Os05t0427400-00 Rice cytosol, peroxisome, plastid 74.65 75.28
TraesCS2A01G196700.1 Wheat peroxisome 73.68 75.25
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 73.68 75.25
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 74.1 75.04
EES05455 Sorghum cytosol, peroxisome, plastid 74.1 74.93
EES07176 Sorghum cytosol, peroxisome, plastid 74.1 74.93
EES07177 Sorghum cytosol, peroxisome, plastid 74.1 74.93
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 74.1 74.93
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 74.1 74.93
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 74.1 74.93
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 74.1 74.83
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 73.68 74.72
TraesCS6B01G258500.1 Wheat extracellular, unclear 73.82 74.65
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 73.82 74.55
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 73.68 74.51
Zm00001d051166_P001 Maize extracellular 73.82 74.44
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 73.41 74.44
Zm00001d017275_P001 Maize extracellular 74.1 74.41
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 73.55 74.37
Zm00001d051163_P002 Maize peroxisome 73.82 74.23
EES07175 Sorghum cytosol, peroxisome, plastid 73.55 73.96
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 68.42 73.95
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 72.85 73.88
Solyc03g078270.1.1 Tomato endoplasmic reticulum 14.82 73.79
TraesCS6D01G212500.1 Wheat peroxisome 72.71 73.74
TraesCS2B01G020100.1 Wheat peroxisome 68.7 72.83
Os02t0626600-00 Rice plasma membrane 71.75 72.45
TraesCS2B01G398300.2 Wheat peroxisome 36.7 72.01
PGSC0003DMT400055529 Potato cytosol 16.62 71.86
TraesCS2A01G212600.1 Wheat cytosol 26.32 71.7
Os02t0626100-01 Rice extracellular, plasma membrane 69.11 71.18
Os04t0518100-01 Rice plasma membrane 69.67 71.15
HORVU2Hr1G089440.9 Barley plasma membrane 75.21 70.8
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 68.98 70.74
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 68.98 70.74
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 68.98 70.74
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 68.28 70.63
EES12521 Sorghum cytosol 68.7 70.55
Zm00001d017274_P001 Maize plasma membrane 68.7 70.55
Zm00001d051161_P003 Maize plastid 68.42 70.27
EES07174 Sorghum cytosol, peroxisome, plastid 68.42 70.17
Zm00001d029015_P001 Maize peroxisome 38.64 70.1
TraesCS3B01G027800.1 Wheat mitochondrion 52.63 69.85
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 69.53 69.43
Zm00001d033286_P001 Maize peroxisome 65.93 68.19
Os12t0520200-01 Rice plasma membrane 63.57 67.5
TraesCS3D01G016300.1 Wheat peroxisome 63.85 66.91
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 63.71 66.67
TraesCS3A01G029200.1 Wheat peroxisome 63.57 66.62
TraesCS3B01G053900.1 Wheat peroxisome 63.57 66.62
EER93773 Sorghum peroxisome 64.82 66.01
Zm00001d027249_P001 Maize peroxisome 20.22 65.47
Solyc03g071870.1.1 Tomato peroxisome 15.51 65.12
TraesCS3D01G016500.1 Wheat peroxisome 61.63 64.59
TraesCSU01G030700.1 Wheat peroxisome 60.53 64.36
HORVU6Hr1G058820.2 Barley mitochondrion 62.47 63.61
Zm00001d020933_P001 Maize mitochondrion 18.56 63.51
Zm00001d003016_P001 Maize plastid 68.7 62.86
Solyc10g011930.1.1 Tomato cytosol 10.8 61.42
Solyc10g011920.1.1 Tomato cytosol 10.53 59.84
Zm00001d053619_P001 Maize mitochondrion 34.35 58.63
VIT_11s0016g01640.t01 Wine grape peroxisome 53.74 58.35
Bra028793.1-P Field mustard peroxisome 23.68 58.16
Zm00001d051164_P001 Maize peroxisome 12.19 56.05
GSMUA_Achr9P15990_001 Banana peroxisome 54.57 56.05
VIT_11s0016g01660.t01 Wine grape peroxisome 12.6 52.3
HORVU2Hr1G062750.1 Barley mitochondrion 13.16 51.63
VIT_11s0016g01520.t01 Wine grape peroxisome 61.36 49.5
Os12t0461300-00 Rice plastid 16.9 48.22
Os08t0308300-00 Rice plastid 10.39 39.89
VIT_11s0016g01510.t01 Wine grape peroxisome 12.74 25.92
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
ProteinID:AAL14120ProteinID:AAL14120.1EMBL:AY055752InterPro:Aromatic_LyaseEnsemblPlantsGene:Bra017210EnsemblPlants:Bra017210.1
EnsemblPlants:Bra017210.1-PInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987GO:GO:0016829GO:GO:0016841
GO:GO:0019748GO:GO:0045548InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likeUniProt:M4DL29
PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF32InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyase
InterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI000254442ESEG:seg:
Description
AT2G37040 (E=0.0) pal1, ATPAL1 | pal1 (Phe ammonia lyase 1); phenylalanine ammonia-lyase
Coordinates
chrA04:-:16026763..16029329
Molecular Weight (calculated)
78301.8 Da
IEP (calculated)
6.248
GRAVY (calculated)
-0.163
Length
722 amino acids
Sequence
(BLAST)
001: MEVNGLSHGG EVDAMLCGGE IKKNATVVGA DPLNWGAAAE QMKGSHLDEV KRMVKEFRRP VVNLGGETLT IGQVAAISTL GNGVKVELSE TARAGVKASS
101: DWVMESMGKG TDSYGVTTGF GATSHRRTKN GVALQKELIR FLNAGIFGST KETSHTLPHS ATRAAMLVRI NTLLQGYSGI RFEILEAITS FLNNNITPSL
201: PLRGTITASG DLVPLSYIAG LLTGRPNSKA TGPNGEALNA EEAFKMAGVT SGFFDLQPKE GLALVNGTAV GSGMASMVLF EANVLSVLAE VLSAVFAEVM
301: SGKPEFTDHL THRLKHHPGQ IEAAAIMEHI LDGSSYMKLA QKLHEMDPLQ KPKQDRYALR TSPQWLGPQI EVIRYATKSI EREINSVNDN PLIDVSRNKA
401: IHGGNFQGTP IGVSMDNTRL AIAAIGKLMF AQFSELVNDY YNNGLPSNLT ASRNPSLDYG FKGAEIAMAS YCSELQYLAN PVTSHVQSAE QHNQDVNSLG
501: LISSRKTSEA VDILKLMSTT FLVGICQAID LRHLEENLKQ TVKNTVSQVA KKVLTTGVNG ELHPSRFCEK DLLKVVDREQ VYTYADDPCS ATYPLIQKLR
601: QVIVDHALVN GESEKNAMTS IFHKIGAFEE ELKAVLPKEV EAARAAYDNG TAAIPNRIKE CRSYPLYRFV REELGTELLT GEKATSPGEE FDKVFTAICE
701: GKIIDPLMEC LDEWNGAPIP IC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.