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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • peroxisome 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
MultiLoc:peroxisome
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G016330.1
HORVU1Hr1G022060.1
HORVU2Hr1G038120.1
HORVU2Hr1G038140.1
HORVU2Hr1G062750.1
HORVU2Hr1G089440.9
HORVU2Hr1G089540.1
HORVU3Hr1G005330.2
HORVU6Hr1G058820.2
HORVU6Hr1G058840.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 HORVU0Hr1G016330.1 AT2G37040.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT2G37040.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT2G37040.1 21798944
AT2G37040.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G53260.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G53260.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 98.87 98.73
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 98.59 98.45
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 69.17 98.19
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 96.89 96.89
HORVU2Hr1G089540.1 Barley peroxisome 60.96 91.9
Os04t0518400-01 Rice extracellular, plasma membrane 91.8 90.9
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 91.94 89.9
OQU81984 Sorghum peroxisome 89.39 88.52
Zm00001d003015_P001 Maize peroxisome 88.26 87.27
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 87.27 86.66
HORVU2Hr1G089440.9 Barley plasma membrane 93.35 86.05
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 86.7 85.73
Solyc03g036480.1.1 Tomato peroxisome 11.74 81.37
CDY18464 Canola peroxisome 47.24 78.96
PGSC0003DMT400080765 Potato peroxisome 47.95 77.93
CDX67566 Canola cytosol 53.32 76.78
Solyc03g042560.1.1 Tomato peroxisome 50.49 76.61
PGSC0003DMT400055489 Potato mitochondrion 42.29 76.47
Solyc03g036470.1.1 Tomato mitochondrion 24.75 76.42
CDX73567 Canola cytosol 53.47 76.21
CDX78161 Canola cytosol 53.47 76.21
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 73.27 75.4
Solyc10g086180.1.1 Tomato extracellular 75.25 74.82
CDY66761 Canola cytosol, peroxisome, plastid 54.88 74.76
Bra003126.1-P Field mustard cytosol 74.68 74.68
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 74.96 74.54
AT3G10340.1 Thale cress peroxisome 74.4 74.4
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 75.67 74.1
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 75.53 74.06
KRG91925 Soybean cytosol, peroxisome, plastid 75.11 74.06
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 75.53 73.96
CDX76219 Canola cytosol 54.6 73.95
Solyc09g007920.2.1 Tomato extracellular, nucleus 75.39 73.93
Solyc09g007910.2.1 Tomato extracellular, nucleus 75.39 73.93
AT3G53260.1 Thale cress cytosol 74.82 73.78
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 71.85 73.73
Bra029831.1-P Field mustard cytosol 73.55 73.65
CDY08611 Canola cytosol 73.41 73.51
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 74.68 73.44
Bra006985.1-P Field mustard cytosol 73.27 73.37
CDY00922 Canola cytosol 73.13 73.23
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 74.54 72.69
Solyc03g078280.1.1 Tomato peroxisome 26.45 72.48
Solyc09g007890.1.1 Tomato plastid 73.41 72.18
Solyc03g071860.2.1 Tomato endoplasmic reticulum 36.92 71.51
Bra039777.1-P Field mustard peroxisome 51.49 71.37
CDX99621 Canola mitochondrion 54.31 70.2
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 67.33 68.99
AT5G04230.2 Thale cress peroxisome 67.89 68.77
Solyc03g078270.1.1 Tomato endoplasmic reticulum 13.86 67.59
HORVU2Hr1G062750.1 Barley mitochondrion 17.54 67.39
HORVU6Hr1G058820.2 Barley mitochondrion 67.47 67.28
CDY15917 Canola cytosol, peroxisome, plastid 65.77 66.62
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 65.63 66.48
CDY13306 Canola peroxisome 19.66 66.19
Bra005221.1-P Field mustard peroxisome 34.65 66.04
CDX91331 Canola peroxisome 34.37 63.95
CDX74991 Canola peroxisome 34.23 63.68
PGSC0003DMT400055529 Potato cytosol 14.85 62.87
CDY18463 Canola peroxisome 23.34 62.74
VIT_11s0016g01640.t01 Wine grape peroxisome 54.6 58.05
GSMUA_Achr9P15990_001 Banana peroxisome 55.59 55.9
Solyc03g071870.1.1 Tomato peroxisome 13.44 55.23
Solyc10g011920.1.1 Tomato cytosol 9.62 53.54
Solyc10g011930.1.1 Tomato cytosol 9.62 53.54
CDY61769 Canola peroxisome 18.25 50.99
Bra028793.1-P Field mustard peroxisome 21.07 50.68
VIT_11s0016g01660.t01 Wine grape peroxisome 12.31 50.0
VIT_11s0016g01520.t01 Wine grape peroxisome 62.38 49.27
VIT_11s0016g01510.t01 Wine grape peroxisome 13.72 27.32
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
UniProt:A0A287EVT9InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987GO:GO:0016829
GO:GO:0016841GO:GO:0019748GO:GO:0045548EnsemblPlantsGene:HORVU1Hr1G022060EnsemblPlants:HORVU1Hr1G022060.1InterPro:IPR023144
InterPro:IPR024083InterPro:L-Aspartase-likePFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF9
InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI000B48718B
SEG:seg:::::
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A287EVT9]
Coordinates
chrchr1H:-:91840019..91842498
Molecular Weight (calculated)
76040.2 Da
IEP (calculated)
6.215
GRAVY (calculated)
-0.078
Length
707 amino acids
Sequence
(BLAST)
001: MAANGNDGLC VAKPRSADPL NWGKAAEELS GSHLDAVKRM VEEYRRPVVV MEGASLTIAQ VAAVAAAGGA SVELDESARG RVKESSDWVM ASMANGVDSY
101: GVTTGFGATS HRRTKEGGAL QRELIRFLNA GAFGTGTDGH VLPAATTRAA MLVRVNTLLQ GYSGIRFEIL ETIATLLNAN VTPCLPLRGT ITASGDLVPL
201: SYIAGLVTGR PNAVAVAPDG TKVNAAEAFK IAGIQHGFFE LQPKEGLAMV NGTAVGSGLA SIVLFEANIL GVLAEVLSAV FCEVMNGKPE YTDHLTHKLK
301: HHPGQIEAAA IMEHILEGSS YMMLAKKLGE LDPLMKPKQD RYALRTSPQW LGPQIEVIRA ATKSIEREIN SVNDNPLIDV SRGKAIHGGN FQGTPIGVSM
401: DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLGNPVTNH VQSAEQHNQD VNSLGLISSR KTAEAIDILK
501: LMSSTFLVAL CQAIDLRHLE ENVKNAVKNC VTRVARKTLI TNDMGGLHNA RFCEKDLLQT IDREAVFAYA DDPCSANYPL MKKMRAVLVE HALANGEAER
601: NAETSVFAKV ATFEQELCAA LPQEVEAARG AVENGTATEP NRIADCRSYP LYRFVRKELG TVYLTGEKTR SPSEEVDKVF IAMNQGKHID ALLECLKEWN
701: GEPLPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.