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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome
MultiLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G016330.1
HORVU1Hr1G022060.1
HORVU2Hr1G038120.1
HORVU2Hr1G038140.1
HORVU2Hr1G062750.1
HORVU2Hr1G089440.9
HORVU2Hr1G089540.1
HORVU3Hr1G005330.2
HORVU6Hr1G058820.2
HORVU6Hr1G058840.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 HORVU0Hr1G016330.1 AT2G37040.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT2G37040.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT2G37040.1 21798944
AT2G37040.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G53260.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G53260.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g036480.1.1 Tomato peroxisome 17.27 79.41
Solyc03g036470.1.1 Tomato mitochondrion 37.53 76.86
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 82.3 74.23
CDX67566 Canola cytosol 73.13 69.86
CDX78161 Canola cytosol 73.56 69.56
CDX73567 Canola cytosol 73.56 69.56
CDY66761 Canola cytosol, peroxisome, plastid 76.55 69.17
CDX76219 Canola cytosol 76.12 68.39
Solyc03g078270.1.1 Tomato endoplasmic reticulum 21.11 68.28
Bra039777.1-P Field mustard peroxisome 71.86 66.08
CDY18463 Canola peroxisome 34.97 62.36
HORVU2Hr1G062750.1 Barley mitochondrion 24.31 61.96
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 92.32 61.24
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 91.9 60.96
Os04t0518400-01 Rice extracellular, plasma membrane 92.54 60.78
OQU81984 Sorghum peroxisome 90.41 59.38
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 89.55 58.99
HORVU2Hr1G089440.9 Barley plasma membrane 96.38 58.93
Zm00001d003015_P001 Maize peroxisome 89.34 58.6
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 88.27 57.9
Solyc03g071870.1.1 Tomato peroxisome 20.9 56.98
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 84.44 54.77
Solyc10g011930.1.1 Tomato cytosol 14.71 54.33
Solyc10g011920.1.1 Tomato cytosol 14.5 53.54
Bra003126.1-P Field mustard cytosol 76.12 50.49
CDY00922 Canola cytosol 75.91 50.42
CDY08611 Canola cytosol 75.48 50.14
Bra029831.1-P Field mustard cytosol 75.48 50.14
AT3G10340.1 Thale cress peroxisome 75.48 50.07
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 76.97 50.0
CDY13306 Canola peroxisome 22.39 50.0
KRG91925 Soybean cytosol, peroxisome, plastid 76.12 49.79
AT3G53260.1 Thale cress cytosol 75.91 49.65
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 72.71 49.64
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 76.55 49.52
Solyc09g007910.2.1 Tomato extracellular, nucleus 75.91 49.38
Solyc09g007920.2.1 Tomato extracellular, nucleus 75.69 49.24
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 75.69 49.24
Solyc10g086180.1.1 Tomato extracellular 74.63 49.23
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 75.69 49.17
Solyc09g007890.1.1 Tomato plastid 75.05 48.96
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 74.2 48.95
Bra006985.1-P Field mustard cytosol 73.56 48.87
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 74.41 48.54
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 70.36 47.9
AT5G04230.2 Thale cress peroxisome 70.79 47.56
CDY15917 Canola cytosol, peroxisome, plastid 69.3 46.56
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 69.08 46.42
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 68.02 46.23
CDX99621 Canola mitochondrion 50.96 43.69
HORVU6Hr1G058820.2 Barley mitochondrion 63.54 42.03
VIT_11s0016g01640.t01 Wine grape peroxisome 56.72 40.0
GSMUA_Achr9P15990_001 Banana peroxisome 58.85 39.26
Solyc03g042560.1.1 Tomato peroxisome 38.81 39.06
PGSC0003DMT400080765 Potato peroxisome 34.97 37.7
CDY18464 Canola peroxisome 33.69 37.35
CDY61769 Canola peroxisome 19.83 36.76
VIT_11s0016g01520.t01 Wine grape peroxisome 66.1 34.64
Solyc03g071860.2.1 Tomato endoplasmic reticulum 26.65 34.25
Bra028793.1-P Field mustard peroxisome 20.04 31.97
PGSC0003DMT400055489 Potato mitochondrion 25.8 30.95
Bra005221.1-P Field mustard peroxisome 21.54 27.22
CDX91331 Canola peroxisome 21.75 26.84
CDX74991 Canola peroxisome 21.75 26.84
VIT_11s0016g01510.t01 Wine grape peroxisome 17.7 23.38
Solyc03g078280.1.1 Tomato peroxisome 11.73 21.32
PGSC0003DMT400055529 Potato cytosol 0.64 1.8
VIT_11s0016g01660.t01 Wine grape peroxisome 0.64 1.72
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1UniProt:A0A287IVI3
InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987GO:GO:0016829GO:GO:0016841
GO:GO:0019748GO:GO:0045548EnsemblPlantsGene:HORVU2Hr1G089540EnsemblPlants:HORVU2Hr1G089540.1InterPro:IPR024083InterPro:L-Aspartase-like
PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF9InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyase
SUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI000B47A253:::
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A287IVI3]
Coordinates
chrchr2H:+:639339735..639342347
Molecular Weight (calculated)
49876.0 Da
IEP (calculated)
6.590
GRAVY (calculated)
-0.075
Length
469 amino acids
Sequence
(BLAST)
001: MECDNGHVAA NGDGLCVAQP ARADPLNWGK AAEDLSGSHL DAVKRMVEEY RKPVVTMEGA SLTIAMVAAV AAGSETRVEL DESARGRVKE SSDWVMNSMM
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGNDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND LYNNGLPSNL SGGRNPSLDY GFKGAEIAMA XRPPRPLTY
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.