Factsheet for Solyc09g007890.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
vacuole 1
mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g036470.1.1
Solyc03g036480.1.1
Solyc03g042560.1.1
Solyc03g071860.2.1
Solyc03g071870.1.1
Solyc03g078270.1.1
Solyc03g078280.1.1
Solyc03g120320.1.1
Solyc03g120330.1.1
Solyc06g066770.1.1
Solyc09g007890.1.1
Solyc09g007900.2.1
Solyc09g007910.2.1
Solyc09g007920.2.1
Solyc10g011920.1.1
Solyc10g011930.1.1
Solyc10g086180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Solyc03g036470.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G10340.1	Solyc03g120320.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc03g120330.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc06g066770.1.1	AT1G15670.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g007920.2.1	Tomato	extracellular, nucleus	94.44	94.17
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	94.3	94.04
Solyc09g007910.2.1	Tomato	extracellular, nucleus	94.3	94.04
Solyc03g036470.1.1	Tomato	mitochondrion	29.76	93.45
Solyc03g042560.1.1	Tomato	peroxisome	58.69	90.56
Solyc03g036480.1.1	Tomato	peroxisome	12.38	87.25
Solyc10g086180.1.1	Tomato	extracellular	85.81	86.78
Solyc03g078280.1.1	Tomato	peroxisome	31.02	86.43
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	43.53	85.75
CDY18464	Canola	peroxisome	48.4	82.27
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	73.99	81.72
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	77.89	81.51
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	81.5	81.05
CDX78161	Canola	cytosol	55.91	81.05
CDY66761	Canola	cytosol, peroxisome, plastid	58.41	80.92
GSMUA_Achr1P09070_001	Banana	peroxisome	73.44	80.73
CDX73567	Canola	cytosol	55.63	80.65
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	80.81	80.47
KRG91925	Soybean	cytosol, peroxisome, plastid	79.97	80.2
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	79.0	80.11
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	16.13	80.0
CDX76219	Canola	cytosol	58.0	79.89
CDX67566	Canola	cytosol	54.52	79.84
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	72.46	79.54
Bra003126.1-P	Field mustard	cytosol	78.16	79.49
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	80.11	79.45
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	72.04	79.45
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	66.34	79.37
GSMUA_Achr2P00240_001	Banana	peroxisome	71.77	79.02
AT3G10340.1	Thale cress	peroxisome	77.61	78.92
Bra029831.1-P	Field mustard	cytosol	77.05	78.47
CDY08611	Canola	cytosol	77.05	78.47
AT3G53260.1	Thale cress	cytosol	78.03	78.24
Bra006985.1-P	Field mustard	cytosol	76.63	78.05
CDY00922	Canola	cytosol	76.63	78.05
Bra039777.1-P	Field mustard	peroxisome	54.52	76.86
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	55.49	76.73
GSMUA_Achr11P...	Banana	peroxisome	68.57	76.67
TraesCS1D01G039300.1	Wheat	mitochondrion	55.08	75.14
HORVU2Hr1G089540.1	Barley	peroxisome	48.96	75.05
TraesCS2D01G204400.1	Wheat	peroxisome	69.4	74.7
TraesCS5B01G468400.1	Wheat	peroxisome	57.3	74.64
Solyc03g071870.1.1	Tomato	peroxisome	17.8	74.42
Os04t0518400-01	Rice	extracellular, plasma membrane	73.57	74.09
Solyc10g011930.1.1	Tomato	cytosol	13.07	74.02
Zm00001d017276_P001	Maize	peroxisome	72.32	73.86
TraesCS2B01G398000.2	Wheat	plastid	73.16	73.77
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	73.16	73.77
Zm00001d017275_P001	Maize	extracellular	73.71	73.71
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	72.46	73.69
Os02t0626400-01	Rice	mitochondrion, plasma membrane	73.57	73.68
EES05455	Sorghum	cytosol, peroxisome, plastid	73.16	73.67
EES07176	Sorghum	cytosol, peroxisome, plastid	73.16	73.67
EES07177	Sorghum	cytosol, peroxisome, plastid	73.16	73.67
TraesCS2D01G377600.1	Wheat	plastid	72.6	73.62
Zm00001d003015_P001	Maize	peroxisome	73.16	73.57
TraesCS2D01G204700.1	Wheat	peroxisome	72.32	73.55
TraesCS6B01G258500.1	Wheat	extracellular, unclear	73.02	73.53
Os02t0627100-01	Rice	plasma membrane	72.88	73.49
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	72.32	73.45
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	73.02	73.43
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	72.18	73.41
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	72.18	73.41
TraesCS2B01G224000.1	Wheat	peroxisome	72.18	73.41
TraesCS2D01G218700.1	Wheat	peroxisome	72.18	73.41
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	72.18	73.41
EES07175	Sorghum	cytosol, peroxisome, plastid	73.3	73.4
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	72.74	73.35
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	72.74	73.35
Bra005221.1-P	Field mustard	peroxisome	37.83	73.32
CDX99621	Canola	mitochondrion	55.77	73.31
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	72.18	73.31
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	72.74	73.25
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	72.74	73.25
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	72.6	73.21
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	72.6	73.21
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	72.6	73.21
TraesCS1D01G039400.1	Wheat	golgi	71.91	73.13
Zm00001d051163_P002	Maize	peroxisome	73.02	73.12
OQU81984	Sorghum	peroxisome	72.6	73.11
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	71.77	73.09
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	72.32	73.03
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	72.46	72.97
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	72.46	72.87
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	72.32	72.83
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	72.46	72.77
Zm00001d051166_P001	Maize	extracellular	72.46	72.77
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	72.18	72.69
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	71.77	72.47
CDX74991	Canola	peroxisome	38.25	72.37
CDX91331	Canola	peroxisome	38.25	72.37
AT5G04230.2	Thale cress	peroxisome	70.24	72.35
TraesCS6D01G212500.1	Wheat	peroxisome	71.35	72.05
CDY18463	Canola	peroxisome	26.29	71.86
Solyc10g011920.1.1	Tomato	cytosol	12.66	71.65
CDY13306	Canola	peroxisome	20.72	70.95
Zm00001d029015_P001	Maize	peroxisome	39.08	70.6
Os02t0626600-00	Rice	plasma membrane	70.1	70.49
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	67.73	69.77
CDY15917	Canola	cytosol, peroxisome, plastid	67.59	69.63
TraesCS2B01G398300.2	Wheat	peroxisome	35.47	69.29
TraesCS2B01G020100.1	Wheat	peroxisome	65.23	68.87
Os04t0518100-01	Rice	plasma membrane	67.45	68.6
HORVU2Hr1G089440.9	Barley	plasma membrane	73.16	68.58
Os02t0626100-01	Rice	extracellular, plasma membrane	66.62	68.33
EES12521	Sorghum	cytosol	66.76	68.28
Zm00001d017274_P001	Maize	plasma membrane	66.76	68.28
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	66.48	67.9
TraesCS3B01G027800.1	Wheat	mitochondrion	51.32	67.83
EES07174	Sorghum	cytosol, peroxisome, plastid	66.34	67.76
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	66.34	67.76
Zm00001d051161_P003	Maize	plastid	66.2	67.71
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	67.87	67.5
Zm00001d033286_P001	Maize	peroxisome	64.53	66.48
Os12t0520200-01	Rice	plasma membrane	62.59	66.18
TraesCS3D01G016300.1	Wheat	peroxisome	62.03	64.73
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	61.89	64.49
EER93773	Sorghum	peroxisome	63.56	64.46
Zm00001d020933_P001	Maize	mitochondrion	18.92	64.45
TraesCS3B01G053900.1	Wheat	peroxisome	61.75	64.44
Zm00001d027249_P001	Maize	peroxisome	19.89	64.13
TraesCS3D01G016500.1	Wheat	peroxisome	59.94	62.55
Zm00001d003016_P001	Maize	plastid	67.18	61.22
HORVU6Hr1G058820.2	Barley	mitochondrion	60.08	60.93
Zm00001d053619_P001	Maize	mitochondrion	34.77	59.1
GSMUA_Achr9P15990_001	Banana	peroxisome	55.49	56.76
Zm00001d051164_P001	Maize	peroxisome	12.24	56.05
CDY61769	Canola	peroxisome	19.05	54.15
Bra028793.1-P	Field mustard	peroxisome	21.56	52.72
HORVU2Hr1G062750.1	Barley	mitochondrion	12.93	50.54
Os12t0461300-00	Rice	plastid	15.86	45.06
Os08t0308300-00	Rice	plastid	9.87	37.77

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:9.2.1.1.1
InterPro:Aromatic_Lyase	InterPro:Fumarase/histidase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006559	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009698	GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841
GO:GO:0019748	GO:GO:0045548	InterPro:IPR023144	InterPro:IPR024083	UniProt:K4CQH8	InterPro:L-Aspartase-like
PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase
InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557	EnsemblPlantsGene:Solyc09g007890.1	EnsemblPlants:Solyc09g007890.1.1	TIGRFAMs:TIGR01226	UniParc:UPI000276BB02

Description

Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:K4CQH8]

Coordinates

chr9:-:1413536..1415858

Molecular Weight (calculated)

78221.0 Da

IEP (calculated)

6.616

GRAVY (calculated)

-0.149

Length

719 amino acids

Sequence
(BLAST)

001: MASIVPNGHA NGKVVAMDLC KKSIIVNDPL NWEMAAESLR GSHLDEVKKM VDEFRKPIVK LGGETLTIAQ VASIANVDNK SNGVKVELSE SSRAGVKASS
101: DWVMDSMSKG TDSYGVTTGF GDTSHRRTTN GSALQKDLIR FLNAGVLGNG TESSHTLPHS ATRAAMLVRI NTLLQGYSGI RFEILEAITK LINSNITPCL
201: PLRGTITASG DLVPLSYIAG LLTGRPNSKA VGPNGEKLNA EEAFRVAGVT SGFFELQPKE GLALVNGTAV GSGMASMVLF ESNILVVMSE VLSAIFAEVM
301: NGKPEFTDYL THKLKHHPGQ IEAAAIMEHI LDGSSYVKAA QKLHEMDPLQ KPKQDRYALR TSPQWLGPQI EVIRVATKMI EREINSVNDN PLIDVSRNKA
401: LHGGNFQGTP IGVSMDNTRL ALASIGKLMF AQLSELVNDY YNNGLPSNLS AGRNPSLDYG FKGAEIAMAS YCSELQFLAN PVTNHVQSAE QHNQDVNSLG
501: LISARKTAEA VDILKLMSST YLVALCQAID LRHLEENLSN AVKNTVSQVA KRTLTVGANG ELHPARFCEK ELPQVVDREY LFAYVDDPCN STYPLIQKLR
601: QVLVDHAMKN EKNVNSSIFQ KIVAFEDELK AVLPKEVENA RAVVESGNPA IPNRITECRS YPLYKLVRQQ LGTELLTGEK VRSPGEDIEK VFTAICNGEI
701: IDPLLECLKN WNGAPIPIC

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.