Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
16377746
plasma membrane: 18521681 extracellular: 20408568 plastid: 22065420 plastid: 23198870 plasma membrane: 23508561 plasma membrane: 27341663 |
msms PMID:
16377746
doi
Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.
msms PMID:
23198870
doi
Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.
msms PMID:
18521681
doi
Department of Agricultural Biotechnology, University of Padua, Agripolis, Strada Romea, 16-35020 Legnaro, Padova, Italy.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
20408568
doi
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051161_P003 | Maize | plastid | 98.15 | 98.15 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 96.73 | 96.59 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 90.61 | 90.87 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 88.34 | 88.21 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 88.34 | 88.21 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 88.19 | 88.07 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 62.02 | 80.15 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 78.24 | 79.83 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 77.95 | 79.54 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 77.95 | 79.54 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 77.67 | 79.13 |
| Zm00001d003016_P001 | Maize | plastid | 87.62 | 78.07 |
| TraesCS3D01G016500.1 | Wheat | peroxisome | 75.96 | 77.5 |
| HORVU6Hr1G058820.2 | Barley | mitochondrion | 77.67 | 77.01 |
| TraesCSU01G030700.1 | Wheat | peroxisome | 73.83 | 76.44 |
| Zm00001d017276_P001 | Maize | peroxisome | 74.68 | 74.57 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 10.81 | 74.51 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 24.18 | 74.24 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 74.96 | 73.71 |
| CDY18464 | Canola | peroxisome | 44.24 | 73.52 |
| Zm00001d051166_P001 | Maize | extracellular | 74.82 | 73.46 |
| Zm00001d051163_P002 | Maize | peroxisome | 74.82 | 73.26 |
| PGSC0003DMT400080765 | Potato | peroxisome | 45.23 | 73.1 |
| Zm00001d017275_P001 | Maize | extracellular | 74.4 | 72.74 |
| Zm00001d003015_P001 | Maize | peroxisome | 73.97 | 72.73 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 47.51 | 71.67 |
| Zm00001d029015_P001 | Maize | peroxisome | 40.4 | 71.36 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 71.83 | 71.03 |
| Solyc10g086180.1.1 | Tomato | extracellular | 71.69 | 70.89 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 68.99 | 70.6 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 39.26 | 70.59 |
| AT3G10340.1 | Thale cress | peroxisome | 70.98 | 70.58 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 71.55 | 69.67 |
| CDX78161 | Canola | cytosol | 49.08 | 69.56 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 68.14 | 69.52 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 70.84 | 69.46 |
| CDX73567 | Canola | cytosol | 48.93 | 69.35 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 70.84 | 69.26 |
| CDX67566 | Canola | cytosol | 48.36 | 69.25 |
| Bra029831.1-P | Field mustard | cytosol | 69.42 | 69.12 |
| CDY00922 | Canola | cytosol | 69.42 | 69.12 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 50.92 | 68.98 |
| Zm00001d033286_P001 | Maize | peroxisome | 68.42 | 68.91 |
| CDY08611 | Canola | cytosol | 69.13 | 68.84 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 70.55 | 68.7 |
| AT3G53260.1 | Thale cress | cytosol | 69.99 | 68.62 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 70.27 | 68.52 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 70.13 | 68.38 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 70.13 | 68.38 |
| Bra003126.1-P | Field mustard | cytosol | 68.71 | 68.32 |
| CDX99621 | Canola | mitochondrion | 53.06 | 68.19 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 70.27 | 68.14 |
| CDX76219 | Canola | cytosol | 50.5 | 68.01 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 24.89 | 67.83 |
| Zm00001d027249_P001 | Maize | peroxisome | 21.48 | 67.71 |
| Bra006985.1-P | Field mustard | cytosol | 67.99 | 67.71 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.8 | 66.9 |
| Zm00001d020933_P001 | Maize | mitochondrion | 20.06 | 66.82 |
| Solyc09g007890.1.1 | Tomato | plastid | 68.28 | 66.76 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 34.14 | 65.75 |
| Bra039777.1-P | Field mustard | peroxisome | 47.51 | 65.49 |
| AT5G04230.2 | Thale cress | peroxisome | 65.01 | 65.47 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 65.01 | 65.47 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 64.72 | 65.19 |
| Bra005221.1-P | Field mustard | peroxisome | 32.29 | 61.19 |
| Zm00001d053619_P001 | Maize | mitochondrion | 36.7 | 60.99 |
| CDY18463 | Canola | peroxisome | 22.19 | 59.32 |
| CDX74991 | Canola | peroxisome | 32.01 | 59.21 |
| CDX91331 | Canola | peroxisome | 32.01 | 59.21 |
| CDY13306 | Canola | peroxisome | 17.21 | 57.62 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 54.91 | 54.91 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 51.92 | 54.89 |
| Zm00001d051164_P001 | Maize | peroxisome | 12.09 | 54.14 |
| PGSC0003DMT400055529 | Potato | cytosol | 12.8 | 53.89 |
| Solyc10g011930.1.1 | Tomato | cytosol | 9.53 | 52.76 |
| Solyc10g011920.1.1 | Tomato | cytosol | 9.53 | 52.76 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 12.66 | 51.74 |
| CDY61769 | Canola | peroxisome | 17.78 | 49.41 |
| Bra028793.1-P | Field mustard | peroxisome | 20.48 | 48.98 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.66 | 47.13 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 59.74 | 46.93 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 12.8 | 25.35 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | EntrezGene:542258 |
| MapMan:9.2.1.1.1 | ProteinID:AQK72770.1 | InterPro:Aromatic_Lyase | UniProt:B8A046 | EMBL:BT054938 | InterPro:Fumarase/histidase_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009698 | GO:GO:0009699 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009800 | GO:GO:0009987 |
| GO:GO:0016598 | GO:GO:0016829 | GO:GO:0016841 | GO:GO:0019538 | GO:GO:0019748 | GO:GO:0045548 |
| GO:GO:0046898 | GO:GO:0052883 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI0001917377 | EnsemblPlantsGene:Zm00001d017274 | EnsemblPlants:Zm00001d017274_P001 | EnsemblPlants:Zm00001d017274_T001 |
| SEG:seg | : | : | : | : | : |
Description
phenylalanine ammonia lyase homolog1Phenylalanine ammonia-lyase
Coordinates
chr5:-:191418711..191422345
Molecular Weight (calculated)
75468.5 Da
IEP (calculated)
6.320
GRAVY (calculated)
-0.069
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNGAIVES DPLNWGAAAA ELAGSHLDEV KRMVAQARQP VVKIEGSTLR VGQVAAVASA KDASGVAVEL DEEARPRVKA SSEWILDCIA HGGDIYGVTT
101: GFGGTSHRRT KDGPALQVEL LRHLNAGIFG TGSDGHTLPS EVTRAAMLVR INTLLQGYSG IRFEILEAIT KLLNTGVSPC LPLRGTITAS GDLVPLSYIA
201: GLITGRPNAQ AVTVDGRKVD AAEAFKIAGI EGGFFKLNPK EGLAIVNGTS VGSALAATVM YDANVLAVLS EVLSAVFCEV MNGKPEYTDH LTHKLKHHPG
301: SIEAAAIMEH ILDGSSFMKQ AKKLNELDPL LKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREVNSVND NPVIDVHRGK ALHGGNFQGT PIGVSMDNAR
401: LAIANIGKLM FAQFSELVNE FYNNGLTSNL AGSRNPSLDY GFKGTEIAMA SYCSELQYLG NPITNHVQSA EQHNQDVNSL GLVSARKTAE AIDILKLMSS
501: TYIVALCQAV DLRHLEENIK ASVKNTVTQV AKKVLTMNPS GELSSARFSE KELISAIDRE AVFTYAEDAA SGSLPLMQKL RAVLVDHALS SGDAEREPSV
601: FSKITRFEEE LRAVLPQEVE AARVAVAEGT APVANRIADS RSFPLYRFVR EELGCVFLTG ERLKSPGEEC NKVFVGISQG KLVDPMLECL KEWDGKPLPI
701: NVK
101: GFGGTSHRRT KDGPALQVEL LRHLNAGIFG TGSDGHTLPS EVTRAAMLVR INTLLQGYSG IRFEILEAIT KLLNTGVSPC LPLRGTITAS GDLVPLSYIA
201: GLITGRPNAQ AVTVDGRKVD AAEAFKIAGI EGGFFKLNPK EGLAIVNGTS VGSALAATVM YDANVLAVLS EVLSAVFCEV MNGKPEYTDH LTHKLKHHPG
301: SIEAAAIMEH ILDGSSFMKQ AKKLNELDPL LKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREVNSVND NPVIDVHRGK ALHGGNFQGT PIGVSMDNAR
401: LAIANIGKLM FAQFSELVNE FYNNGLTSNL AGSRNPSLDY GFKGTEIAMA SYCSELQYLG NPITNHVQSA EQHNQDVNSL GLVSARKTAE AIDILKLMSS
501: TYIVALCQAV DLRHLEENIK ASVKNTVTQV AKKVLTMNPS GELSSARFSE KELISAIDRE AVFTYAEDAA SGSLPLMQKL RAVLVDHALS SGDAEREPSV
601: FSKITRFEEE LRAVLPQEVE AARVAVAEGT APVANRIADS RSFPLYRFVR EELGCVFLTG ERLKSPGEEC NKVFVGISQG KLVDPMLECL KEWDGKPLPI
701: NVK
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.