Factsheet for Solyc03g071870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 3
vacuole 1
peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g036470.1.1
Solyc03g036480.1.1
Solyc03g042560.1.1
Solyc03g071860.2.1
Solyc03g071870.1.1
Solyc03g078270.1.1
Solyc03g078280.1.1
Solyc03g120320.1.1
Solyc03g120330.1.1
Solyc06g066770.1.1
Solyc09g007890.1.1
Solyc09g007900.2.1
Solyc09g007910.2.1
Solyc09g007920.2.1
Solyc10g011920.1.1
Solyc10g011930.1.1
Solyc10g086180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Solyc03g036470.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G10340.1	Solyc03g120320.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc03g120330.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc06g066770.1.1	AT1G15670.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g011930.1.1	Tomato	cytosol	51.16	69.29
Solyc10g011920.1.1	Tomato	cytosol	50.58	68.5
Zm00001d051164_P001	Maize	peroxisome	43.6	47.77
CDY13306	Canola	peroxisome	49.42	40.48
CDY18463	Canola	peroxisome	61.63	40.3
HORVU2Hr1G062750.1	Barley	mitochondrion	42.44	39.67
Zm00001d027249_P001	Maize	peroxisome	33.72	26.01
Bra005221.1-P	Field mustard	peroxisome	53.49	24.8
CDX74991	Canola	peroxisome	53.49	24.21
CDX91331	Canola	peroxisome	53.49	24.21
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	18.6	22.07
CDX67566	Canola	cytosol	61.63	21.59
CDX78161	Canola	cytosol	62.21	21.57
CDX73567	Canola	cytosol	61.63	21.37
CDY61769	Canola	peroxisome	31.4	21.34
CDY66761	Canola	cytosol, peroxisome, plastid	63.37	21.0
HORVU2Hr1G089540.1	Barley	peroxisome	56.98	20.9
CDX76219	Canola	cytosol	62.79	20.69
Bra039777.1-P	Field mustard	peroxisome	59.88	20.2
Zm00001d053619_P001	Maize	mitochondrion	48.26	19.62
Zm00001d029015_P001	Maize	peroxisome	45.35	19.6
Bra028793.1-P	Field mustard	peroxisome	31.4	18.37
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	76.74	18.31
Solyc09g007920.2.1	Tomato	extracellular, nucleus	76.74	18.31
Solyc09g007910.2.1	Tomato	extracellular, nucleus	76.16	18.17
Solyc09g007890.1.1	Tomato	plastid	74.42	17.8
Solyc10g086180.1.1	Tomato	extracellular	73.26	17.72
TraesCS5B01G468400.1	Wheat	peroxisome	55.81	17.39
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	63.95	16.9
Zm00001d020933_P001	Maize	mitochondrion	20.35	16.59
GSMUA_Achr1P09070_001	Banana	peroxisome	62.79	16.51
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	57.56	16.47
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	60.47	15.95
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	65.7	15.94
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	60.47	15.88
GSMUA_Achr2P00240_001	Banana	peroxisome	59.88	15.77
Solyc03g036470.1.1	Tomato	mitochondrion	20.93	15.72
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	65.12	15.51
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	65.12	15.45
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	64.53	15.35
AT3G53260.1	Thale cress	cytosol	63.95	15.34
Bra003126.1-P	Field mustard	cytosol	62.79	15.28
Bra006985.1-P	Field mustard	cytosol	62.21	15.16
Bra029831.1-P	Field mustard	cytosol	61.63	15.01
CDY08611	Canola	cytosol	61.63	15.01
KRG91925	Soybean	cytosol, peroxisome, plastid	62.21	14.92
CDY00922	Canola	cytosol	61.05	14.87
AT3G10340.1	Thale cress	peroxisome	61.05	14.85
GSMUA_Achr11P...	Banana	peroxisome	55.23	14.77
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	59.88	14.47
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	59.3	14.33
TraesCS6D01G212500.1	Wheat	peroxisome	59.3	14.33
EES05455	Sorghum	cytosol, peroxisome, plastid	59.3	14.29
EES07176	Sorghum	cytosol, peroxisome, plastid	59.3	14.29
EES07177	Sorghum	cytosol, peroxisome, plastid	59.3	14.29
Zm00001d003015_P001	Maize	peroxisome	59.3	14.27
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	56.98	14.26
Zm00001d017276_P001	Maize	peroxisome	58.14	14.2
OQU81984	Sorghum	peroxisome	58.72	14.15
Os04t0518400-01	Rice	extracellular, plasma membrane	58.72	14.15
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	58.72	14.13
EES07175	Sorghum	cytosol, peroxisome, plastid	58.72	14.07
Os02t0626400-01	Rice	mitochondrion, plasma membrane	58.72	14.07
Zm00001d051163_P002	Maize	peroxisome	58.14	13.93
Zm00001d017275_P001	Maize	extracellular	58.14	13.91
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	57.56	13.83
Os02t0627100-01	Rice	plasma membrane	56.98	13.74
TraesCS2B01G398000.2	Wheat	plastid	56.98	13.74
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	56.98	13.74
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	56.98	13.74
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	56.4	13.72
Zm00001d051166_P001	Maize	extracellular	56.98	13.69
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	56.4	13.6
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	56.4	13.59
TraesCS6B01G258500.1	Wheat	extracellular, unclear	56.4	13.59
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	56.4	13.59
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	55.81	13.58
TraesCS1D01G039400.1	Wheat	golgi	55.81	13.58
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	56.4	13.57
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	55.81	13.56
TraesCS2D01G377600.1	Wheat	plastid	55.81	13.54
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	55.81	13.46
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	55.81	13.46
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	55.81	13.45
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	55.23	13.44
TraesCS2B01G224000.1	Wheat	peroxisome	55.23	13.44
TraesCS2D01G204700.1	Wheat	peroxisome	55.23	13.44
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	55.23	13.44
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	55.23	13.42
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	55.23	13.32
AT5G04230.2	Thale cress	peroxisome	54.07	13.32
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	54.65	13.31
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	55.23	13.31
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	55.23	13.31
TraesCS2D01G218700.1	Wheat	peroxisome	54.07	13.15
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	39.53	13.08
Zm00001d033286_P001	Maize	peroxisome	52.33	12.89
EES12521	Sorghum	cytosol	51.74	12.66
Zm00001d017274_P001	Maize	plasma membrane	51.74	12.66
Zm00001d051161_P003	Maize	plastid	51.74	12.66
Os12t0520200-01	Rice	plasma membrane	50.0	12.65
HORVU2Hr1G089440.9	Barley	plasma membrane	56.4	12.65
EES07174	Sorghum	cytosol, peroxisome, plastid	51.74	12.64
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	51.16	12.61
CDY15917	Canola	cytosol, peroxisome, plastid	51.16	12.61
Os02t0626100-01	Rice	extracellular, plasma membrane	51.16	12.55
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	50.58	12.36
EER93773	Sorghum	peroxisome	50.58	12.27
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	50.0	12.22
TraesCS3D01G016500.1	Wheat	peroxisome	48.84	12.19
TraesCS3D01G016300.1	Wheat	peroxisome	47.09	11.76
TraesCS2B01G020100.1	Wheat	peroxisome	46.51	11.75
Os04t0518100-01	Rice	plasma membrane	48.26	11.74
TraesCS2D01G204400.1	Wheat	peroxisome	45.35	11.68
TraesCS3B01G053900.1	Wheat	peroxisome	45.93	11.47
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	45.35	11.3
Zm00001d003016_P001	Maize	plastid	51.16	11.15
Os02t0626600-00	Rice	plasma membrane	45.93	11.05
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	40.12	9.54
GSMUA_Achr9P15990_001	Banana	peroxisome	28.49	6.97
HORVU6Hr1G058820.2	Barley	mitochondrion	26.16	6.35
TraesCS2B01G398300.2	Wheat	peroxisome	13.37	6.25
Os12t0461300-00	Rice	plastid	7.56	5.14
TraesCS1D01G039300.1	Wheat	mitochondrion	10.47	3.42
Os08t0308300-00	Rice	plastid	3.49	3.19
CDX99621	Canola	mitochondrion	9.88	3.11
TraesCS3B01G027800.1	Wheat	mitochondrion	8.14	2.57
CDY18464	Canola	peroxisome	0.58	0.24
PGSC0003DMT400080765	Potato	peroxisome	0.58	0.23
Solyc03g042560.1.1	Tomato	peroxisome	0.58	0.21
Solyc03g036480.1.1	Tomato	peroxisome	0.0	0.0
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	0.0	0.0
Solyc03g078280.1.1	Tomato	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc03g071870.1.1	EnsemblPlantsGene:Solyc03g071870.1	Gene3D:1.10.275.10	GO:GO:0003674	GO:GO:0003824	InterPro:Aromatic_Lyase
InterPro:Fumarase/histidase_N	InterPro:IPR024083	InterPro:L-Aspartase-like	PANTHER:PTHR10362	PANTHER:PTHR10362:SF30	PFAM:PF00221
SUPFAM:SSF48557	UniParc:UPI0002767BE7	UniProt:K4BHL6	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3:-:19027245..19027999

Molecular Weight (calculated)

18301.1 Da

IEP (calculated)

10.141

GRAVY (calculated)

-0.144

Length

172 amino acids

Sequence
(BLAST)

001: MAPAIAQNGH VIGEVLCKKS IHDPLNWEMA ADSLRGSHLN EVKKMVVELR KPIVKLGDGT LTVAQVASIA NISGVKVQLS ETARAGLKAS SDCVMDSMSK
101: GTDSYGVTTK FGATSHRRTK NGGALQKELI RFLNAGVFWP NSKAIGPNGE KLDAHEAFRV AGLSGGFFQL QP

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.