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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 3
  • vacuole 1
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G016330.1
HORVU1Hr1G022060.1
HORVU2Hr1G038120.1
HORVU2Hr1G038140.1
HORVU2Hr1G062750.1
HORVU2Hr1G089440.9
HORVU2Hr1G089540.1
HORVU3Hr1G005330.2
HORVU6Hr1G058820.2
HORVU6Hr1G058840.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 HORVU0Hr1G016330.1 AT2G37040.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT2G37040.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT2G37040.1 21798944
AT2G37040.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G53260.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G53260.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 97.61 97.61
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 97.33 97.33
TraesCS6D01G212500.1 Wheat peroxisome 97.05 97.05
Os05t0427400-00 Rice cytosol, peroxisome, plastid 91.57 91.06
HORVU2Hr1G089540.1 Barley peroxisome 58.99 89.55
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 87.08 87.69
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 86.66 87.27
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 85.96 85.59
HORVU2Hr1G089440.9 Barley plasma membrane 88.34 82.01
Solyc03g036480.1.1 Tomato peroxisome 11.66 81.37
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 81.74 80.5
Solyc03g036470.1.1 Tomato mitochondrion 25.42 79.04
CDY18464 Canola peroxisome 46.07 77.54
PGSC0003DMT400080765 Potato peroxisome 47.05 77.01
Solyc03g042560.1.1 Tomato peroxisome 49.72 75.97
CDX78161 Canola cytosol 52.39 75.2
CDX73567 Canola cytosol 52.39 75.2
CDX67566 Canola cytosol 51.83 75.15
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 72.47 75.11
Solyc10g086180.1.1 Tomato extracellular 74.86 74.96
PGSC0003DMT400055489 Potato mitochondrion 41.01 74.68
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 74.3 74.4
AT3G10340.1 Thale cress peroxisome 73.74 74.26
CDY66761 Canola cytosol, peroxisome, plastid 54.07 74.18
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 75.14 74.1
CDY00922 Canola cytosol 73.31 73.94
Solyc09g007910.2.1 Tomato extracellular, nucleus 74.86 73.93
Bra029831.1-P Field mustard cytosol 73.17 73.8
Solyc09g007920.2.1 Tomato extracellular, nucleus 74.72 73.79
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 74.72 73.79
KRG91925 Soybean cytosol, peroxisome, plastid 74.3 73.78
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 74.44 73.71
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 74.72 73.68
CDX76219 Canola cytosol 53.79 73.37
CDY08611 Canola cytosol 72.75 73.37
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 70.79 73.15
Bra003126.1-P Field mustard cytosol 72.47 72.98
AT3G53260.1 Thale cress cytosol 73.17 72.66
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 73.88 72.55
Solyc09g007890.1.1 Tomato plastid 73.03 72.32
Bra006985.1-P Field mustard cytosol 71.63 72.24
Solyc03g078280.1.1 Tomato peroxisome 25.84 71.32
Bra039777.1-P Field mustard peroxisome 50.7 70.78
Solyc03g071860.2.1 Tomato endoplasmic reticulum 36.24 70.68
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 68.12 70.29
CDX99621 Canola mitochondrion 53.37 69.47
Solyc03g078270.1.1 Tomato endoplasmic reticulum 14.04 68.97
AT5G04230.2 Thale cress peroxisome 67.42 68.77
HORVU6Hr1G058820.2 Barley mitochondrion 66.43 66.71
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 65.03 66.33
CDY15917 Canola cytosol, peroxisome, plastid 64.89 66.19
CDY13306 Canola peroxisome 19.24 65.24
Bra005221.1-P Field mustard peroxisome 33.99 65.23
CDY18463 Canola peroxisome 23.74 64.26
CDX74991 Canola peroxisome 33.71 63.16
CDX91331 Canola peroxisome 33.71 63.16
HORVU2Hr1G062750.1 Barley mitochondrion 16.29 63.04
PGSC0003DMT400055529 Potato cytosol 14.33 61.08
Solyc03g071870.1.1 Tomato peroxisome 14.47 59.88
VIT_11s0016g01640.t01 Wine grape peroxisome 54.78 58.65
GSMUA_Achr9P15990_001 Banana peroxisome 56.04 56.76
Solyc10g011930.1.1 Tomato cytosol 9.97 55.91
Solyc10g011920.1.1 Tomato cytosol 9.69 54.33
Bra028793.1-P Field mustard peroxisome 21.49 52.04
CDY61769 Canola peroxisome 18.4 51.78
VIT_11s0016g01660.t01 Wine grape peroxisome 12.5 51.15
VIT_11s0016g01520.t01 Wine grape peroxisome 62.92 50.06
VIT_11s0016g01510.t01 Wine grape peroxisome 13.9 27.89
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
EMBL:AK356176InterPro:Aromatic_LyaseUniProt:F2CX23InterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987
GO:GO:0016829GO:GO:0016841GO:GO:0019748GO:GO:0045548EnsemblPlantsGene:HORVU6Hr1G058840EnsemblPlants:HORVU6Hr1G058840.1
InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likePFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362
PANTHER:PTHR10362:SF31InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226
UniParc:UPI0002004BC5SEG:seg::::
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F2CX23]
Coordinates
chrchr6H:+:386020334..386023043
Molecular Weight (calculated)
76721.3 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.053
Length
712 amino acids
Sequence
(BLAST)
001: MECENGEAAA NGNILCMAIQ HADPLNWGKA AEELTGSHLD EVKRMVAEYR KPVVTIEGAS LSIAKVAAVA AAGEVVVELD ESARERVKAS SDWVMNSMMN
101: GTDSYGVTTG FGATSHRRTK EGGALQRELI RFLNAGAFGT GSDAHVLPAA TTRAAMLVRI NTLLQGYSGI RFEILEAVAK LLNANVTPCL PLRGTITASG
201: DLVPLSYIAG LITGRDNSVA IGPDGTKVNA AEAFKIAGIH GGFFELQPKE GLAMVNGTAV GSALASTVLF EANILALLAE VISAVFCEVM NGKPEFTDHL
301: THKLKHHPGQ IEAAAIMEHI LEGSSYMKLA KKLGDLDPLM KPKQDRYALR TSPQWLGPQI EVIRAATKSI EREINSVNDN PLIDVSRGKA IHGGNFQGTP
401: IGVSMDNTRL AIAAIGKLMF AQFSELVNDL YNNGLPSNLS GGRNPSLDYG FKGAEIAMAS YCSELQFLGN PVTNHVQSAE QHNQDVNSLG LISSRKTAEA
501: IEILKLMSST FLVALCQAID LRHIEENVKS AVKSCVMTVA KKTLSTNSTG GLHVARFCEK DLLQEIEREA VFAYADDPCS PNYPLMKKLR GVLVERALSN
601: GMAEFDAETS VLAKVALFEE ELRKTLPRAV EAARAAVESG TAEMPNRITE CRSYPLYRFV REELGTVYLT GEKTRSPGEE LNKVLVAINQ GKHIDALLEC
701: LKEWNGEPLP IC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.