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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 3
  • vacuole 1
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G016330.1
HORVU1Hr1G022060.1
HORVU2Hr1G038120.1
HORVU2Hr1G038140.1
HORVU2Hr1G062750.1
HORVU2Hr1G089440.9
HORVU2Hr1G089540.1
HORVU3Hr1G005330.2
HORVU6Hr1G058820.2
HORVU6Hr1G058840.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 HORVU0Hr1G016330.1 AT2G37040.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT2G37040.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT2G37040.1 21798944
AT2G37040.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G53260.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G53260.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G258500.1 Wheat extracellular, unclear 99.44 99.58
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 99.3 99.44
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 99.16 99.3
Os02t0626400-01 Rice mitochondrion, plasma membrane 93.71 93.31
EES07175 Sorghum cytosol, peroxisome, plastid 90.91 90.53
Zm00001d017275_P001 Maize extracellular 90.77 90.26
Zm00001d051163_P002 Maize peroxisome 89.79 89.42
HORVU2Hr1G089540.1 Barley peroxisome 57.9 88.27
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 85.73 86.7
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 85.45 86.42
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 85.59 85.96
Solyc03g036480.1.1 Tomato peroxisome 11.61 81.37
HORVU2Hr1G089440.9 Barley plasma membrane 86.43 80.57
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 80.7 79.81
Solyc03g036470.1.1 Tomato mitochondrion 25.17 78.6
PGSC0003DMT400080765 Potato peroxisome 47.41 77.93
CDY18464 Canola peroxisome 46.01 77.78
Solyc03g042560.1.1 Tomato peroxisome 50.21 77.04
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 73.29 76.27
CDX67566 Canola cytosol 52.17 75.97
PGSC0003DMT400055489 Potato mitochondrion 41.4 75.7
CDX73567 Canola cytosol 52.45 75.6
CDX78161 Canola cytosol 52.45 75.6
Solyc10g086180.1.1 Tomato extracellular 74.83 75.25
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 74.69 75.11
CDY66761 Canola cytosol, peroxisome, plastid 54.27 74.76
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 75.24 74.62
KRG91925 Soybean cytosol, peroxisome, plastid 74.83 74.62
Solyc09g007920.2.1 Tomato extracellular, nucleus 75.1 74.48
Solyc09g007910.2.1 Tomato extracellular, nucleus 74.97 74.34
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 74.97 74.24
AT3G10340.1 Thale cress peroxisome 73.15 73.97
Bra003126.1-P Field mustard cytosol 73.15 73.97
CDX76219 Canola cytosol 53.99 73.95
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 74.55 73.82
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 74.13 73.71
Bra029831.1-P Field mustard cytosol 72.59 73.51
CDY00922 Canola cytosol 72.59 73.51
CDY08611 Canola cytosol 72.45 73.37
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 74.13 73.1
Solyc09g007890.1.1 Tomato plastid 73.43 73.02
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 70.35 73.0
AT3G53260.1 Thale cress cytosol 73.15 72.94
Bra006985.1-P Field mustard cytosol 71.47 72.38
Bra039777.1-P Field mustard peroxisome 51.05 71.57
Solyc03g078280.1.1 Tomato peroxisome 25.73 71.32
Solyc03g071860.2.1 Tomato endoplasmic reticulum 36.22 70.96
CDX99621 Canola mitochondrion 53.43 69.84
Solyc03g078270.1.1 Tomato endoplasmic reticulum 13.99 68.97
AT5G04230.2 Thale cress peroxisome 66.99 68.62
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 65.87 68.26
HORVU6Hr1G058820.2 Barley mitochondrion 66.71 67.28
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 64.76 66.33
CDY15917 Canola cytosol, peroxisome, plastid 64.62 66.19
Bra005221.1-P Field mustard peroxisome 33.01 63.61
CDY18463 Canola peroxisome 23.22 63.12
CDY13306 Canola peroxisome 18.32 62.38
PGSC0003DMT400055529 Potato cytosol 14.55 62.28
HORVU2Hr1G062750.1 Barley mitochondrion 15.94 61.96
CDX74991 Canola peroxisome 32.73 61.58
CDX91331 Canola peroxisome 32.73 61.58
VIT_11s0016g01640.t01 Wine grape peroxisome 54.69 58.8
GSMUA_Achr9P15990_001 Banana peroxisome 55.52 56.47
Solyc03g071870.1.1 Tomato peroxisome 13.57 56.4
Solyc10g011920.1.1 Tomato cytosol 9.65 54.33
Solyc10g011930.1.1 Tomato cytosol 9.51 53.54
CDY61769 Canola peroxisome 18.18 51.38
Bra028793.1-P Field mustard peroxisome 20.84 50.68
VIT_11s0016g01520.t01 Wine grape peroxisome 62.66 50.06
VIT_11s0016g01660.t01 Wine grape peroxisome 11.61 47.7
VIT_11s0016g01510.t01 Wine grape peroxisome 14.83 29.86
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
EMBL:AK356545InterPro:Aromatic_LyaseUniProt:F2CY41InterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987
GO:GO:0016829GO:GO:0016841GO:GO:0019748GO:GO:0045548EnsemblPlantsGene:HORVU0Hr1G016330EnsemblPlants:HORVU0Hr1G016330.1
InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likePFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362
PANTHER:PTHR10362:SF22InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226
UniParc:UPI0002004CD4SEG:seg::::
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F2CY41]
Coordinates
chrchrUn:-:87346260..87350619
Molecular Weight (calculated)
77124.8 Da
IEP (calculated)
6.215
GRAVY (calculated)
-0.073
Length
715 amino acids
Sequence
(BLAST)
001: MECETGLVGS LNGDGLCVSA PRAADPLNWV KTAEELTGSH LDEVKKMVAQ FREPLVTIEG ASLGIAQVAA VAAGAGVARV ALDESARGRV KESSDWVMTS
101: MMNGTDSYGV TTGFGATSHR RTKEGGALQR ELIRFLNAGA FGTGTDGHVL PAEATRAAML VRINTLLQGY SGIRFEILEA ITKLLNANVT PCLPLRGTIT
201: ASGDLVPLSY IAGLITGRQN SVAVAPDGSK VTAAEAFKIA GIEHGFFELQ PKEGLAMVNG TAVGSGLAST VLFEANVLSV LAEVLSAVFC EVMNGKPEFT
301: DHLTHKLKHH PGQIEAAAIM EHILEGSSYM KQAKKLGELD PLMKPKQDRY ALRTSPQWLG PQIEVIRFAT KSIEREINSV NDNPLIDVSR GKAIHGGNFQ
401: GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLSGGRNPSL DYGFKGAEIA MASYCSELQF LGNPVTNHVQ SAEQHNQDVN SLGLISSRKT
501: AEAIDILKIM SSTFLVALCQ AIDLRHIEEN MKTAVRNCVM QVAKKTLSMN NMGGLHIARF CEKDLLTAID REAVFAYADD PCSPNYPLMQ KLRAVLVEHA
601: LANGDGERAL ETSIFAKVAE FEQNIRAALP KEVEAARASV ENGTPLAPNR IKDCRSYPLY QFVREVCGTE YLTGEKTRSP GEELNKVLVA MNERKHIDPL
701: LECLKEWNGA PLPLC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.