Factsheet for Solyc10g011930.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g036470.1.1
Solyc03g036480.1.1
Solyc03g042560.1.1
Solyc03g071860.2.1
Solyc03g071870.1.1
Solyc03g078270.1.1
Solyc03g078280.1.1
Solyc03g120320.1.1
Solyc03g120330.1.1
Solyc06g066770.1.1
Solyc09g007890.1.1
Solyc09g007900.2.1
Solyc09g007910.2.1
Solyc09g007920.2.1
Solyc10g011920.1.1
Solyc10g011930.1.1
Solyc10g086180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	Solyc03g036470.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT2G37040.1	21798944
AT2G37040.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT2G37040.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G10340.1	Solyc03g120320.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc03g120330.1.1	AT1G15670.1	21798944
AT3G10340.1	Solyc06g066770.1.1	AT1G15670.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G10340.1	21798944
AT3G53260.1	Solyc03g036470.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g036480.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g042560.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071860.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g071870.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078270.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc03g078280.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007890.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007900.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007910.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc09g007920.2.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011920.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g011930.1.1	AT3G53260.1	21798944
AT3G53260.1	Solyc10g086180.1.1	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g011920.1.1	Tomato	cytosol	93.7	93.7
TraesCSU01G030600.1	Wheat	peroxisome	48.82	55.36
Solyc03g071870.1.1	Tomato	peroxisome	69.29	51.16
Zm00001d051164_P001	Maize	peroxisome	55.12	44.59
HORVU2Hr1G062750.1	Barley	mitochondrion	51.97	35.87
CDY13306	Canola	peroxisome	59.06	35.71
CDY18463	Canola	peroxisome	60.63	29.28
Zm00001d027249_P001	Maize	peroxisome	37.8	21.52
Bra005221.1-P	Field mustard	peroxisome	62.2	21.29
CDX74991	Canola	peroxisome	62.2	20.79
CDX91331	Canola	peroxisome	62.2	20.79
CDY61769	Canola	peroxisome	34.65	17.39
CDX67566	Canola	cytosol	59.84	15.48
CDX78161	Canola	cytosol	59.06	15.12
Bra028793.1-P	Field mustard	peroxisome	34.65	14.97
CDX73567	Canola	cytosol	58.27	14.92
HORVU2Hr1G089540.1	Barley	peroxisome	54.33	14.71
Bra039777.1-P	Field mustard	peroxisome	59.06	14.71
CDY66761	Canola	cytosol, peroxisome, plastid	59.84	14.64
CDX76219	Canola	cytosol	59.84	14.56
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	77.95	14.37
Zm00001d053619_P001	Maize	mitochondrion	44.09	13.24
Solyc09g007890.1.1	Tomato	plastid	74.02	13.07
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	73.23	12.9
Solyc09g007910.2.1	Tomato	extracellular, nucleus	73.23	12.9
Solyc09g007920.2.1	Tomato	extracellular, nucleus	73.23	12.9
TraesCS5B01G468400.1	Wheat	peroxisome	54.33	12.5
Zm00001d029015_P001	Maize	peroxisome	38.58	12.31
Solyc10g086180.1.1	Tomato	extracellular	67.72	12.1
GSMUA_Achr1P09070_001	Banana	peroxisome	59.06	11.47
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	58.27	11.37
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	53.54	11.31
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	56.69	10.99
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	61.42	10.8
Bra003126.1-P	Field mustard	cytosol	59.84	10.75
TraesCS5A01G558600.1	Wheat	mitochondrion	35.43	10.74
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	55.12	10.74
GSMUA_Achr11P...	Banana	peroxisome	54.33	10.73
GSMUA_Achr2P00240_001	Banana	peroxisome	55.12	10.72
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	60.63	10.62
Bra006985.1-P	Field mustard	cytosol	58.27	10.48
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	59.06	10.37
Bra029831.1-P	Field mustard	cytosol	57.48	10.34
CDY00922	Canola	cytosol	57.48	10.34
CDY08611	Canola	cytosol	57.48	10.34
AT3G53260.1	Thale cress	cytosol	58.27	10.32
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	57.48	10.25
TraesCS6D01G212500.1	Wheat	peroxisome	57.48	10.25
AT3G10340.1	Thale cress	peroxisome	56.69	10.18
Zm00001d017276_P001	Maize	peroxisome	55.91	10.09
EES05455	Sorghum	cytosol, peroxisome, plastid	56.69	10.08
EES07176	Sorghum	cytosol, peroxisome, plastid	56.69	10.08
EES07177	Sorghum	cytosol, peroxisome, plastid	56.69	10.08
AT5G04230.2	Thale cress	peroxisome	55.12	10.03
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	55.91	9.97
Zm00001d003015_P001	Maize	peroxisome	55.91	9.93
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	55.91	9.93
KRG91925	Soybean	cytosol, peroxisome, plastid	55.91	9.9
Os02t0626400-01	Rice	mitochondrion, plasma membrane	55.91	9.89
Os04t0518400-01	Rice	extracellular, plasma membrane	55.12	9.8
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	55.12	9.78
Zm00001d051166_P001	Maize	extracellular	55.12	9.78
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	54.33	9.76
EES07175	Sorghum	cytosol, peroxisome, plastid	55.12	9.75
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	53.54	9.74
CDY15917	Canola	cytosol, peroxisome, plastid	53.54	9.74
Zm00001d017275_P001	Maize	extracellular	55.12	9.74
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	54.33	9.73
Os02t0627100-01	Rice	plasma membrane	54.33	9.68
TraesCS2B01G398000.2	Wheat	plastid	54.33	9.68
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	54.33	9.68
EES12521	Sorghum	cytosol	53.54	9.67
OQU81984	Sorghum	peroxisome	54.33	9.66
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	53.54	9.62
Zm00001d051163_P002	Maize	peroxisome	54.33	9.61
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	53.54	9.6
TraesCS3D01G016500.1	Wheat	peroxisome	51.97	9.58
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	53.54	9.54
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	53.54	9.54
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	53.54	9.54
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	53.54	9.54
Zm00001d017274_P001	Maize	plasma membrane	52.76	9.53
Zm00001d051161_P003	Maize	plastid	52.76	9.53
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	53.54	9.52
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	53.54	9.52
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	53.54	9.52
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	53.54	9.52
TraesCS6B01G258500.1	Wheat	extracellular, unclear	53.54	9.52
EES07174	Sorghum	cytosol, peroxisome, plastid	52.76	9.52
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	52.76	9.52
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	52.76	9.52
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	53.54	9.51
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	52.76	9.48
TraesCS1D01G039400.1	Wheat	golgi	52.76	9.48
TraesCS2B01G224000.1	Wheat	peroxisome	52.76	9.48
TraesCS2D01G204700.1	Wheat	peroxisome	52.76	9.48
TraesCS2D01G218700.1	Wheat	peroxisome	52.76	9.48
TraesCS2D01G377600.1	Wheat	plastid	52.76	9.45
TraesCS3B01G053900.1	Wheat	peroxisome	51.18	9.43
TraesCS3D01G016300.1	Wheat	peroxisome	51.18	9.43
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	51.18	9.42
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	52.76	9.4
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	52.76	9.38
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	51.97	9.34
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	51.97	9.32
Os02t0626100-01	Rice	extracellular, plasma membrane	51.18	9.27
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	51.18	9.21
Os04t0518100-01	Rice	plasma membrane	50.39	9.05
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	48.82	9.02
HORVU2Hr1G089440.9	Barley	plasma membrane	54.33	9.0
Os12t0520200-01	Rice	plasma membrane	47.24	8.82
Zm00001d003016_P001	Maize	plastid	54.33	8.75
TraesCS2B01G020100.1	Wheat	peroxisome	46.46	8.66
Zm00001d033286_P001	Maize	peroxisome	46.46	8.45
EER93773	Sorghum	peroxisome	45.67	8.18
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	31.5	7.69
TraesCS2D01G204400.1	Wheat	peroxisome	39.37	7.49
Os02t0626600-00	Rice	plasma membrane	38.58	6.85
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	33.07	5.81
TraesCS2B01G398300.2	Wheat	peroxisome	16.54	5.71
GSMUA_Achr9P15990_001	Banana	peroxisome	27.56	4.98
Zm00001d020933_P001	Maize	mitochondrion	7.87	4.74
HORVU6Hr1G058820.2	Barley	mitochondrion	19.68	3.53
Os08t0308300-00	Rice	plastid	4.72	3.19
Os12t0461300-00	Rice	plastid	6.3	3.16
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	2.36	2.07
Solyc03g036470.1.1	Tomato	mitochondrion	1.57	0.87
CDX99621	Canola	mitochondrion	0.0	0.0
CDY18464	Canola	peroxisome	0.0	0.0
Solyc03g036480.1.1	Tomato	peroxisome	0.0	0.0
Solyc03g042560.1.1	Tomato	peroxisome	0.0	0.0
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	0.0	0.0
Solyc03g078280.1.1	Tomato	peroxisome	0.0	0.0
TraesCS1D01G039300.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G027800.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc10g011930.1.1	EnsemblPlantsGene:Solyc10g011930.1	Gene3D:1.10.275.10	GO:GO:0003674	GO:GO:0003824	InterPro:Aromatic_Lyase
InterPro:Fumarase/histidase_N	InterPro:IPR024083	InterPro:L-Aspartase-like	ncoils:Coil	PANTHER:PTHR10362	PANTHER:PTHR10362:SF30
PFAM:PF00221	SUPFAM:SSF48557	UniParc:UPI000276C181	UniProt:K4CYH0	MapMan:35.1	:

Description

No Description!

Coordinates

chr10:+:4224537..4224920

Molecular Weight (calculated)

13790.4 Da

IEP (calculated)

9.178

GRAVY (calculated)

-0.442

Length

127 amino acids

Sequence
(BLAST)

001: MASSIAQNVH VSVHDPLNWE MAAESLRGSH LDEVKKMVDE FRKTIVKLEG ENLTIGEVAS IANANNKTNG VKVELSESSR ACVKASSDWI MDSVSKGKDI
101: YGITTGFGAN SKRRTKNGGG LQKELIR

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.