Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g011920.1.1 | Tomato | cytosol | 55.36 | 48.82 |
| Solyc10g011930.1.1 | Tomato | cytosol | 55.36 | 48.82 |
| TraesCS5A01G558600.1 | Wheat | mitochondrion | 63.39 | 16.95 |
| TraesCSU01G030700.1 | Wheat | peroxisome | 100.0 | 16.49 |
| VIT_13s0019g04460.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 59.82 | 9.27 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 58.93 | 9.21 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 55.36 | 9.02 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 55.36 | 9.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G030600.1 | EnsemblPlantsGene:TraesCSU01G030600 | Gene3D:1.10.275.10 | GO:GO:0003674 | GO:GO:0003824 | InterPro:Aromatic_Lyase |
| InterPro:Fumarase/histidase_N | InterPro:IPR024083 | InterPro:L-Aspartase-like | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 | PFAM:PF00221 |
| SEG:seg | SUPFAM:SSF48557 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrUn:+:28813864..28814584
Molecular Weight (calculated)
11843.1 Da
IEP (calculated)
8.549
GRAVY (calculated)
0.087
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHFWSVAAA ELTGSHLDEV KRMVARFRGP VVRILGAGLS FGQVAAVAHA KDAASVTVEL ANEARVRVQA CSDWIVDSVA NGGDIYGVTT GFGGTSHRRT
101: KDGHGLQVEL VR
101: KDGHGLQVEL VR
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.