CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

cytosol 3
extracellular 1
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91925
KRH09825
KRH23494
KRH34854
KRH44388
KRH47516

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37040.1	KRG91925	AT2G37040.1	21798944
AT2G37040.1	KRH34854	AT2G37040.1	21798944
AT2G37040.1	KRG91925	AT3G10340.1	21798944
AT2G37040.1	KRH34854	AT3G10340.1	21798944
AT3G10340.1	KRH09825	AT1G15670.1	21798944
AT3G10340.1	KRH23494	AT1G15670.1	21798944
AT3G10340.1	KRH44388	AT1G15670.1	21798944
AT3G10340.1	KRH47516	AT1G15670.1	21798944
AT3G53260.1	KRG91925	AT3G10340.1	21798944
AT3G53260.1	KRH34854	AT3G10340.1	21798944
AT3G53260.1	KRG91925	AT3G53260.1	21798944
AT3G53260.1	KRH34854	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	92.61	96.65
Solyc03g036480.1.1	Tomato	peroxisome	12.27	86.27
CDY18464	Canola	peroxisome	50.63	85.82
PGSC0003DMT400080765	Potato	peroxisome	51.6	85.06
VIT_13s0019g04460.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	85.08	84.37
Solyc03g036470.1.1	Tomato	mitochondrion	26.92	84.28
KRG95994	Soybean	cytosol, peroxisome, plastid	83.68	84.27
KRH19942	Soybean	cytosol, endoplasmic reticulum, peroxisome	83.4	83.52
KRH32543	Soybean	cytosol, endoplasmic reticulum, peroxisome	83.4	83.4
KRH67701	Soybean	endoplasmic reticulum, peroxisome, plastid	82.71	83.17
KRH67700	Soybean	nucleus, peroxisome, plastid	82.85	82.96
Solyc03g042560.1.1	Tomato	peroxisome	53.84	82.83
PGSC0003DMT400055489	Potato	mitochondrion	45.05	82.61
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	81.87	82.56
Solyc10g086180.1.1	Tomato	extracellular	81.45	82.14
CDX78161	Canola	cytosol	56.49	81.65
CDX73567	Canola	cytosol	56.35	81.45
Bra003126.1-P	Field mustard	cytosol	80.06	81.19
CDY66761	Canola	cytosol, peroxisome, plastid	58.72	81.12
AT3G53260.1	Thale cress	cytosol	80.89	80.89
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	81.31	80.86
Solyc09g007920.2.1	Tomato	extracellular, nucleus	81.31	80.86
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	73.36	80.8
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	73.36	80.67
AT3G10340.1	Thale cress	peroxisome	79.5	80.62
Bra006985.1-P	Field mustard	cytosol	79.36	80.59
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	81.03	80.47
CDX67566	Canola	cytosol	55.09	80.45
Solyc09g007910.2.1	Tomato	extracellular, nucleus	80.75	80.31
GSMUA_Achr2P00240_001	Banana	peroxisome	73.08	80.25
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	80.75	80.19
GSMUA_Achr1P09070_001	Banana	peroxisome	73.08	80.12
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	80.33	80.11
CDX76219	Canola	cytosol	58.3	80.08
Solyc09g007890.1.1	Tomato	plastid	80.2	79.97
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	72.94	79.85
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	80.61	79.72
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	66.81	79.7
Bra029831.1-P	Field mustard	cytosol	78.24	79.46
CDY08611	Canola	cytosol	78.24	79.46
CDY00922	Canola	cytosol	78.1	79.32
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	76.01	79.1
Solyc03g078280.1.1	Tomato	peroxisome	28.31	78.68
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	39.33	77.26
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	55.93	77.12
Bra039777.1-P	Field mustard	peroxisome	54.53	76.67
GSMUA_Achr11P...	Banana	peroxisome	68.34	76.21
HORVU2Hr1G089540.1	Barley	peroxisome	49.79	76.12
Bra005221.1-P	Field mustard	peroxisome	39.33	76.01
TraesCS5B01G468400.1	Wheat	peroxisome	58.44	75.91
TraesCS2D01G204400.1	Wheat	peroxisome	70.71	75.9
Os02t0626400-01	Rice	mitochondrion, plasma membrane	75.87	75.77
TraesCS2D01G377600.1	Wheat	plastid	74.76	75.6
TraesCS1D01G039300.1	Wheat	mitochondrion	55.51	75.52
Os02t0627100-01	Rice	plasma membrane	75.03	75.46
TraesCS2B01G398000.2	Wheat	plastid	74.9	75.32
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	74.9	75.32
TraesCS2B01G224000.1	Wheat	peroxisome	74.2	75.25
CDY13306	Canola	peroxisome	22.04	75.24
Os04t0518400-01	Rice	extracellular, plasma membrane	74.9	75.21
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	74.76	75.18
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	74.76	75.18
Zm00001d017276_P001	Maize	peroxisome	73.78	75.14
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	74.06	75.11
TraesCS2D01G204700.1	Wheat	peroxisome	74.06	75.11
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	74.62	75.04
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	74.62	75.04
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	74.06	75.0
TraesCS6B01G258500.1	Wheat	extracellular, unclear	74.62	74.93
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	73.92	74.86
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	74.62	74.83
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	73.78	74.82
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	73.78	74.82
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	74.62	74.72
TraesCS2D01G218700.1	Wheat	peroxisome	73.64	74.68
EES05455	Sorghum	cytosol, peroxisome, plastid	74.34	74.65
EES07176	Sorghum	cytosol, peroxisome, plastid	74.34	74.65
EES07177	Sorghum	cytosol, peroxisome, plastid	74.34	74.65
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	74.34	74.65
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	73.5	74.65
Zm00001d003015_P001	Maize	peroxisome	74.34	74.55
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	74.34	74.55
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	73.5	74.54
OQU81984	Sorghum	peroxisome	74.2	74.51
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	74.2	74.51
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	74.06	74.47
TraesCS1D01G039400.1	Wheat	golgi	73.36	74.4
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	74.06	74.37
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	74.06	74.37
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	74.06	74.37
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	73.78	74.3
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	73.78	74.3
CDX99621	Canola	mitochondrion	56.62	74.22
Zm00001d051163_P002	Maize	peroxisome	74.2	74.09
EES07175	Sorghum	cytosol, peroxisome, plastid	74.06	73.96
TraesCS6D01G212500.1	Wheat	peroxisome	73.36	73.88
CDX74991	Canola	peroxisome	39.05	73.68
CDX91331	Canola	peroxisome	39.05	73.68
Zm00001d051166_P001	Maize	extracellular	73.5	73.6
Zm00001d017275_P001	Maize	extracellular	73.78	73.57
AT5G04230.2	Thale cress	peroxisome	71.55	73.5
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	14.78	73.1
TraesCS2B01G398300.2	Wheat	peroxisome	37.1	72.28
KRH74070	Soybean	peroxisome	70.71	72.12
PGSC0003DMT400055529	Potato	cytosol	16.74	71.86
CDY15917	Canola	cytosol, peroxisome, plastid	69.6	71.49
Os02t0626100-01	Rice	extracellular, plasma membrane	69.73	71.33
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	69.32	71.2
Os02t0626600-00	Rice	plasma membrane	70.99	71.19
Zm00001d017274_P001	Maize	plasma membrane	69.46	70.84
TraesCS2B01G020100.1	Wheat	peroxisome	67.22	70.78
EES12521	Sorghum	cytosol	69.32	70.7
EES07174	Sorghum	cytosol, peroxisome, plastid	69.32	70.6
Os04t0518100-01	Rice	plasma membrane	69.6	70.58
Zm00001d051161_P003	Maize	plastid	69.18	70.55
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	69.18	70.45
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	69.18	70.45
HORVU2Hr1G089440.9	Barley	plasma membrane	75.03	70.14
Zm00001d029015_P001	Maize	peroxisome	38.77	69.85
CDY18463	Canola	peroxisome	25.52	69.58
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	69.73	69.16
TraesCS3B01G027800.1	Wheat	mitochondrion	52.44	69.12
Zm00001d033286_P001	Maize	peroxisome	65.97	67.77
TraesCS3D01G016300.1	Wheat	peroxisome	64.3	66.91
TraesCS3B01G053900.1	Wheat	peroxisome	64.16	66.76
Os12t0520200-01	Rice	plasma membrane	63.18	66.62
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	63.74	66.23
EER93773	Sorghum	peroxisome	64.85	65.59
Zm00001d027249_P001	Maize	peroxisome	20.36	65.47
TraesCS3D01G016500.1	Wheat	peroxisome	62.62	65.17
Zm00001d020933_P001	Maize	mitochondrion	18.83	63.98
Zm00001d003016_P001	Maize	plastid	70.15	63.75
HORVU6Hr1G058820.2	Barley	mitochondrion	62.48	63.19
Solyc03g071870.1.1	Tomato	peroxisome	14.92	62.21
Zm00001d053619_P001	Maize	mitochondrion	34.87	59.1
TraesCSU01G030600.1	Wheat	peroxisome	9.21	58.93
Zm00001d051164_P001	Maize	peroxisome	12.83	58.6
CDY61769	Canola	peroxisome	20.36	57.71
Bra028793.1-P	Field mustard	peroxisome	23.43	57.14
Solyc10g011920.1.1	Tomato	cytosol	9.9	55.91
Solyc10g011930.1.1	Tomato	cytosol	9.9	55.91
GSMUA_Achr9P15990_001	Banana	peroxisome	54.81	55.9
HORVU2Hr1G062750.1	Barley	mitochondrion	13.39	52.17
Os12t0461300-00	Rice	plastid	16.46	46.64
Os08t0308300-00	Rice	plastid	9.76	37.23
TraesCS5A01G558600.1	Wheat	mitochondrion	15.48	26.49

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	EntrezGene:100818777
MapMan:9.2.1.1.1	EMBL:ACUP02012715	InterPro:Aromatic_Lyase	InterPro:Fumarase/histidase_N	EnsemblPlantsGene:GLYMA_20G180800	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006559
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009698	GO:GO:0009800
GO:GO:0009987	GO:GO:0016829	GO:GO:0016841	GO:GO:0019748	GO:GO:0045548	InterPro:IPR023144
InterPro:IPR024083	UniProt:K7N485	EnsemblPlants:KRG91925	ProteinID:KRG91925	ProteinID:KRG91925.1	InterPro:L-Aspartase-like
PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	MetaCyc:PWY-1121	MetaCyc:PWY-5883
MetaCyc:PWY-6444	MetaCyc:PWY-6457	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557
TIGRFAMs:TIGR01226	UniParc:UPI000233DA66	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:41888034..41894847

Molecular Weight (calculated)

78344.1 Da

IEP (calculated)

6.972

GRAVY (calculated)

-0.171

Length

717 amino acids

Sequence
(BLAST)

001: MEYSKEILSN GNANGSLNLC NGSTDPLNWG MAAEALKGSH LDEVKRMVED YRNPVVKLGG KSLTVSQVAA VATRHHGGVT VELAKETRHG VKASSDWVMD
101: SMVKGTDSYG VTTGFGATSH RRTKQGAALQ NELIRFLNAG IFGNGTESCH TLPHSATRAA MLVRINTLLQ GYSGIRFEIM EAISKFLNHN ITPCLPLRGT
201: ITASGDLVPL SYVAGLLIGR PNSKSIGPNG QVLNAKEAFQ LAGIDGGFFE LQPKEGLALV NGTAVGSGLA SVVLFEANLL VILSEVLSAI FAEVMQGKPE
301: FTDHLTHKLK HHPGQIEAAA IMEHILDGSS YCKAARKLHE IDPLQKPKQD RYALRTSPQW LGPQIEVIRH ATKMIEREIN SVNDNPLIDV SRNKALHGGN
401: FQGTPIGVSM DNTRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLTASRNP SLDYGFKGAE IAMASYCSEL QYLANPVTNH VQSAEQHNQD VNSLGLVSSR
501: KTAEAIDILK LMSSTFLVAL CQAIDLRHLE ENLKNTVRNT VSQVAKRVLT VGINGELHPS RFCEKDLLKI VDREYVYAYI DDPCSATYPL MQKLRLVLVD
601: HALQNGDKEV NSSTSIFQKI GAFEEELNAL LPKEVESSRI EVENGNPAIP NRIKECRSYP LYKFVRENLG TTLLTGEKVK SPGEEFDKVF TALCEGKLID
701: PLLDCLKEWK GAPLPIC

Best Arabidopsis Sequence Match ( AT3G10340.1 )
(BLAST)

001: MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC

Arabidopsis Description

PAL4Phenylalanine ammonia-lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS45]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.