CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
plastid 1
peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95994	Soybean	cytosol, peroxisome, plastid	75.68	74.72
KRH67701	Soybean	endoplasmic reticulum, peroxisome, plastid	75.53	74.47
KRH67700	Soybean	nucleus, peroxisome, plastid	75.53	74.16
KRH32543	Soybean	cytosol, endoplasmic reticulum, peroxisome	74.82	73.36
KRH19942	Soybean	cytosol, endoplasmic reticulum, peroxisome	74.68	73.32
VIT_06s0004g02620.t01	Wine grape	cytosol, peroxisome, plastid	74.25	72.8
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	70.98	72.63
PGSC0003DMT400060308	Potato	cytosol, peroxisome, plastid	71.98	71.57
Solyc05g056170.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	72.12	71.51
KRG91925	Soybean	cytosol, peroxisome, plastid	72.12	70.71
PGSC0003DMT400014003	Potato	peroxisome	60.46	63.72

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	EntrezGene:100787872
MapMan:9.2.1.1.1	UniProt:A0A0R4J2S3	EMBL:ACUP02001294	InterPro:Aromatic_Lyase	InterPro:Fumarase/histidase_N	EnsemblPlantsGene:GLYMA_02G309300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006559	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009698
GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841	GO:GO:0019748	GO:GO:0045548
InterPro:IPR023144	InterPro:IPR024083	EnsemblPlants:KRH74070	ProteinID:KRH74070	ProteinID:KRH74070.1	InterPro:L-Aspartase-like
PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF32	MetaCyc:PWY-1121	MetaCyc:PWY-5883
MetaCyc:PWY-6444	MetaCyc:PWY-6457	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557
TIGRFAMs:TIGR01226	UniParc:UPI000189D367	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:48287101..48289732

Molecular Weight (calculated)

77182.8 Da

IEP (calculated)

6.564

GRAVY (calculated)

-0.109

Length

703 amino acids

Sequence
(BLAST)

001: MATIILENDP LNWSHAADSL KGSHFEEVKR MVAEYRKPLI SLGGGETLTI SQVAAVAVAN ANHNLQAKVD LSESARAGVD ASCDWITQNI NKGTPIYGVT
101: TGFGAASHRQ TQQGLALQKE MVRFLNCAIF GYQTELSHTL PKSATRAAML VRVNTLLQGY SGIRFEILEA ITKLLNHNVT PILPLRGTVT ASGDLIPLSY
201: IVALLTGRRN SKAVGPSGES LNAKEAFHLA GLHSGFFELK PKEGLALVNG TAVGSGVAST VLFEANILAL LSEVLSAVFA EVMQGKPEFT HHLIHKLKYH
301: PGQIEAAAIM EHILDGSSYV KDAKLQQPDP LQKPRKDRYA LVTSPQWLGP QIEIIRYSTK SIEREINSVN DNPLIDVTRN KALNGGNFQG TPIGVSMDNA
401: RLAVASIGKL IFAQFTELVN DLYNNGLPSN LSAGRNPSLD YGFKASEVAM AAYCSELQYL ANPVTSHVQS AEQHNQDVNS LGLISALKTV EAVEILKLMS
501: STYLVALCQA IDLRHLEENF KSTVKNTVSR VAQKTLITEG KEEINPFRLC EKDLLKVVDR EYVFSYIDDP SNVTYPLMPK LKQVLYEKAH ISAINDKNVS
601: LLIFEKIGAF EDELKSLLPK EVENARVAYE NGNPAIPNRI KECRSYPLYK FVREELEIGL LTGEKNLSPD EEFEKVYTAM CQAKIVDPIL ECLGDWKGSP
701: IPI

Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)

001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC

Arabidopsis Description

PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.