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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
EER88591
EER93773
EES05455
EES06499
EES07174
EES07175
EES07176
EES07177
EES12521
OQU81984

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 EER93773 AT2G37040.1 21798944
AT2G37040.1 EES05455 AT2G37040.1 21798944
AT2G37040.1 EES07174 AT2G37040.1 21798944
AT2G37040.1 EES07175 AT2G37040.1 21798944
AT2G37040.1 EES07176 AT2G37040.1 21798944
AT2G37040.1 EES07177 AT2G37040.1 21798944
AT2G37040.1 EES12521 AT2G37040.1 21798944
AT2G37040.1 OQU81984 AT2G37040.1 21798944
AT2G37040.1 EER93773 AT3G10340.1 21798944
AT2G37040.1 EES05455 AT3G10340.1 21798944
AT2G37040.1 EES07174 AT3G10340.1 21798944
AT2G37040.1 EES07175 AT3G10340.1 21798944
AT2G37040.1 EES07176 AT3G10340.1 21798944
AT2G37040.1 EES07177 AT3G10340.1 21798944
AT2G37040.1 EES12521 AT3G10340.1 21798944
AT2G37040.1 OQU81984 AT3G10340.1 21798944
AT3G10340.1 EER88591 AT1G15670.1 21798944
AT3G10340.1 EES06499 AT1G15670.1 21798944
AT3G53260.1 EER93773 AT3G10340.1 21798944
AT3G53260.1 EES05455 AT3G10340.1 21798944
AT3G53260.1 EES07174 AT3G10340.1 21798944
AT3G53260.1 EES07175 AT3G10340.1 21798944
AT3G53260.1 EES07176 AT3G10340.1 21798944
AT3G53260.1 EES07177 AT3G10340.1 21798944
AT3G53260.1 EES12521 AT3G10340.1 21798944
AT3G53260.1 OQU81984 AT3G10340.1 21798944
AT3G53260.1 EER93773 AT3G53260.1 21798944
AT3G53260.1 EES05455 AT3G53260.1 21798944
AT3G53260.1 EES07174 AT3G53260.1 21798944
AT3G53260.1 EES07175 AT3G53260.1 21798944
AT3G53260.1 EES07176 AT3G53260.1 21798944
AT3G53260.1 EES07177 AT3G53260.1 21798944
AT3G53260.1 EES12521 AT3G53260.1 21798944
AT3G53260.1 OQU81984 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003015_P001 Maize peroxisome 94.96 94.83
Os04t0518400-01 Rice extracellular, plasma membrane 93.0 93.0
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 63.59 91.16
TraesCS2D01G204400.1 Wheat peroxisome 84.59 90.42
HORVU2Hr1G089540.1 Barley peroxisome 59.38 90.41
TraesCS2A01G381000.1 Wheat plastid 90.06 90.18
TraesCS2A01G381100.1 Wheat plastid 90.06 90.18
TraesCS2D01G377600.1 Wheat plastid 89.5 90.13
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 89.92 90.04
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 89.92 90.04
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 89.64 89.76
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 89.64 89.76
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 89.64 89.76
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 88.94 89.69
TraesCS2B01G398000.2 Wheat plastid 89.5 89.62
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 89.5 89.62
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 65.27 89.62
TraesCS2B01G224000.1 Wheat peroxisome 88.66 89.53
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 88.66 89.41
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 88.52 89.39
TraesCS2D01G204700.1 Wheat peroxisome 88.52 89.39
TraesCS2D01G218700.1 Wheat peroxisome 88.52 89.39
TraesCS1D01G039300.1 Wheat mitochondrion 65.97 89.37
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 89.22 89.34
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 88.38 89.25
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 88.24 89.11
EES07176 Sorghum cytosol, peroxisome, plastid 89.08 89.08
EES07177 Sorghum cytosol, peroxisome, plastid 89.08 89.08
TraesCS1D01G039400.1 Wheat golgi 88.1 88.97
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 88.1 88.97
EES05455 Sorghum cytosol, peroxisome, plastid 88.94 88.94
TraesCS2A01G196700.1 Wheat peroxisome 87.96 88.83
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 87.68 88.67
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 88.52 88.64
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 88.52 88.52
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 87.39 88.26
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 88.24 88.24
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 86.97 87.84
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 87.82 87.82
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 87.82 87.82
TraesCS5B01G468400.1 Wheat peroxisome 67.79 87.68
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 87.53 87.53
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 87.39 87.52
TraesCS2B01G398300.2 Wheat peroxisome 44.82 86.96
EES07175 Sorghum cytosol, peroxisome, plastid 86.97 86.49
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 80.67 86.23
TraesCS2B01G020100.1 Wheat peroxisome 80.25 84.14
HORVU2Hr1G089440.9 Barley plasma membrane 90.06 83.83
TraesCS2A01G212600.1 Wheat cytosol 30.95 83.4
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 83.75 82.71
Solyc03g036480.1.1 Tomato peroxisome 11.76 82.35
CDY18464 Canola peroxisome 46.64 78.72
PGSC0003DMT400080765 Potato peroxisome 47.62 78.16
Solyc03g042560.1.1 Tomato peroxisome 50.28 77.04
PGSC0003DMT400055489 Potato mitochondrion 42.16 76.98
Solyc03g036470.1.1 Tomato mitochondrion 24.51 76.42
CDX67566 Canola cytosol 52.24 75.97
Solyc10g086180.1.1 Tomato extracellular 75.49 75.81
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 72.83 75.69
EES12521 Sorghum cytosol 74.51 75.68
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 75.07 75.39
EER93773 Sorghum peroxisome 74.79 75.32
AT3G10340.1 Thale cress peroxisome 74.51 75.25
Bra003126.1-P Field mustard cytosol 74.51 75.25
CDX73567 Canola cytosol 52.24 75.2
CDX78161 Canola cytosol 52.24 75.2
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 75.77 75.03
Solyc09g007920.2.1 Tomato extracellular, nucleus 75.63 74.9
Bra029831.1-P Field mustard cytosol 73.81 74.65
CDY00922 Canola cytosol 73.81 74.65
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 75.35 74.52
CDY08611 Canola cytosol 73.67 74.5
Solyc09g007910.2.1 Tomato extracellular, nucleus 75.21 74.48
CDY66761 Canola cytosol, peroxisome, plastid 54.06 74.37
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 75.07 74.24
AT3G53260.1 Thale cress cytosol 74.51 74.2
KRG91925 Soybean cytosol, peroxisome, plastid 74.51 74.2
Bra006985.1-P Field mustard cytosol 73.11 73.94
EES07174 Sorghum cytosol, peroxisome, plastid 72.83 73.86
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 74.37 73.85
CDX76219 Canola cytosol 53.78 73.56
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 74.65 73.52
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 70.87 73.44
Solyc09g007890.1.1 Tomato plastid 73.11 72.6
Solyc03g078280.1.1 Tomato peroxisome 26.19 72.48
Solyc03g071860.2.1 Tomato endoplasmic reticulum 36.41 71.23
CDX99621 Canola mitochondrion 54.48 71.12
Bra039777.1-P Field mustard peroxisome 50.7 70.98
AT5G04230.2 Thale cress peroxisome 67.65 69.2
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 66.39 67.91
CDY15917 Canola cytosol, peroxisome, plastid 66.25 67.77
Solyc03g078270.1.1 Tomato endoplasmic reticulum 13.59 66.9
Bra005221.1-P Field mustard peroxisome 34.73 66.85
CDY13306 Canola peroxisome 19.05 64.76
CDX74991 Canola peroxisome 34.45 64.74
CDX91331 Canola peroxisome 34.45 64.74
PGSC0003DMT400055529 Potato cytosol 14.99 64.07
CDY18463 Canola peroxisome 23.39 63.5
Solyc03g071870.1.1 Tomato peroxisome 14.15 58.72
VIT_11s0016g01640.t01 Wine grape peroxisome 54.06 58.05
GSMUA_Achr9P15990_001 Banana peroxisome 56.02 56.9
Solyc10g011920.1.1 Tomato cytosol 9.66 54.33
Solyc10g011930.1.1 Tomato cytosol 9.66 54.33
CDY61769 Canola peroxisome 18.63 52.57
Bra028793.1-P Field mustard peroxisome 21.57 52.38
VIT_11s0016g01520.t01 Wine grape peroxisome 62.04 49.5
VIT_11s0016g01660.t01 Wine grape peroxisome 12.04 49.43
VIT_11s0016g01510.t01 Wine grape peroxisome 14.01 28.17
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
UniProt:A0A1Z5RDZ8InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987GO:GO:0016829
GO:GO:0016841GO:GO:0019748GO:GO:0045548InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-like
EnsemblPlants:OQU81984ProteinID:OQU81984ProteinID:OQU81984.1PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362
PANTHER:PTHR10362:SF9InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfEnsemblPlantsGene:SORBI_3006G148900SUPFAM:SSF48557
TIGRFAMs:TIGR01226UniParc:UPI000B424F8DSEG:seg:::
Description
hypothetical protein
Coordinates
chr6:-:51053477..51056309
Molecular Weight (calculated)
76606.7 Da
IEP (calculated)
6.082
GRAVY (calculated)
-0.096
Length
714 amino acids
Sequence
(BLAST)
001: MECENGHAAG ASGNGVCLAT PRAADPLNWG KAAEDLTGSH LEAVKRMVEE YRRPLVKIEG ASLTVAQVAA VAAAGEARVE LDESARGRVK ASSDWVMNSM
101: MNGTDSYGVT TGFGATSHRR TKEGGALQRE LIRFLNAGAF GTGDDGHVLP AAATRAAMLV RINTLLQGYS GIRFEILETI AALLNANVTP CLPLRGTITA
201: SGDLVPLSYI AGLVTGRPNS TAVAPDGRKV GAAEAFKIAG IQHGFFELQP KEGLAMVNGT AVGSGLASMV LFEANVLAVL AEVMSAVFCE VMNGKPEYTD
301: HLTHKLKHHP GQIESAAIME HILDGSSYMM LAKKMGELDP LMKPKQDRYA LRTSPQWLGP QIEVIRAATK SIEREINSVN DNPLIDVSRG KALHGGNFQG
401: TPIGVSMDNT RLAVAAIGKL MFAQFSELVN DFYNNGLPSN LSGGRNPSLD YGFKGAEIAM ASYCSELQFL ANPVTNHVQS AEQHNQDVNS LGLISSRKTA
501: EAVDVLKLMS STFLIALCQA VDLRHLEENL KSAVKSCVTT VAKKTLSTSA TGGLHNARFC EKDLLTAIDR EAVFAYADDP CSANYPLMQK MRSVLVEHAL
601: ANGEAERDPE TSVFAKVATF EEELRAALPR EVDAARAAVE NGTAAVPNRI AECRSYPLYR FVREELGTEY LTGEKTRSPG EEVNKVFVAM NLGKHIDAVL
701: ECLKEWNGEP LPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.