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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400006583
PGSC0003DMT400006584
PGSC0003DMT400042650
PGSC0003DMT400042651
PGSC0003DMT400042652
PGSC0003DMT400049886
PGSC0003DMT400055488
PGSC0003DMT400055489
PGSC0003DMT400055529
PGSC0003DMT400055531
PGSC0003DMT400080548
PGSC0003DMT400080765

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 PGSC0003DMT400049886 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055488 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055489 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055529 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400055531 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400080548 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400080765 AT2G37040.1 21798944
AT2G37040.1 PGSC0003DMT400049886 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055488 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055489 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055529 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400055531 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400080548 AT3G10340.1 21798944
AT2G37040.1 PGSC0003DMT400080765 AT3G10340.1 21798944
AT3G10340.1 PGSC0003DMT400006583 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400006584 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400042650 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400042651 AT1G15670.1 21798944
AT3G10340.1 PGSC0003DMT400042652 AT1G15670.1 21798944
AT3G53260.1 PGSC0003DMT400049886 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055488 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055489 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055529 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400055531 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400080548 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400080765 AT3G10340.1 21798944
AT3G53260.1 PGSC0003DMT400049886 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055488 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055489 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055529 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400055531 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400080548 AT3G53260.1 21798944
AT3G53260.1 PGSC0003DMT400080765 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400055489 Potato mitochondrion 90.42 38.62
Os12t0461300-00 Rice plastid 52.1 34.39
PGSC0003DMT400080765 Potato peroxisome 87.43 33.56
Bra005221.1-P Field mustard peroxisome 72.46 32.61
CDX74991 Canola peroxisome 72.46 31.84
CDX91331 Canola peroxisome 72.46 31.84
Os08t0308300-00 Rice plastid 34.13 30.32
TraesCS2B01G398300.2 Wheat peroxisome 64.07 29.08
CDY18464 Canola peroxisome 71.86 28.37
Bra028793.1-P Field mustard peroxisome 38.32 21.77
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 88.02 21.34
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 89.82 20.78
TraesCS1D01G039300.1 Wheat mitochondrion 64.67 20.49
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 88.02 20.45
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 83.83 19.69
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 72.46 17.61
Bra006985.1-P Field mustard cytosol 73.65 17.42
VIT_13s0019g04460.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 73.65 17.01
Bra003126.1-P Field mustard cytosol 71.86 16.97
AT3G53260.1 Thale cress cytosol 72.46 16.88
KRG91925 Soybean cytosol, peroxisome, plastid 71.86 16.74
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 71.86 16.62
CDY61769 Canola peroxisome 25.15 16.6
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 71.86 16.55
TraesCS2D01G204400.1 Wheat peroxisome 64.67 16.17
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 68.26 16.12
Bra029831.1-P Field mustard cytosol 67.66 16.01
CDY08611 Canola cytosol 67.66 16.01
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 68.26 15.99
PGSC0003DMT400014003 Potato peroxisome 63.47 15.89
AT3G10340.1 Thale cress peroxisome 67.07 15.84
PGSC0003DMT400060308 Potato cytosol, peroxisome, plastid 67.07 15.84
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 67.07 15.84
CDX99621 Canola mitochondrion 51.5 15.72
TraesCS2B01G020100.1 Wheat peroxisome 64.07 15.71
TraesCS1D01G039400.1 Wheat golgi 66.47 15.7
Os04t0518400-01 Rice extracellular, plasma membrane 67.07 15.69
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 67.07 15.69
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 67.07 15.69
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 66.47 15.55
CDY00922 Canola cytosol 65.27 15.44
TraesCS2B01G398000.2 Wheat plastid 65.87 15.43
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 65.87 15.43
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 65.87 15.43
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 65.87 15.43
TraesCS2D01G218700.1 Wheat peroxisome 65.27 15.42
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 65.87 15.41
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 65.27 15.29
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 64.67 15.28
TraesCS2B01G224000.1 Wheat peroxisome 64.67 15.28
TraesCS2D01G377600.1 Wheat plastid 64.67 15.23
TraesCS2D01G204700.1 Wheat peroxisome 64.07 15.13
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 64.07 15.11
Zm00001d003015_P001 Maize peroxisome 64.67 15.1
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 64.07 15.01
OQU81984 Sorghum peroxisome 64.07 14.99
Os02t0626600-00 Rice plasma membrane 64.07 14.96
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 64.67 14.94
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 62.87 14.87
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 62.87 14.85
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 62.87 14.83
Zm00001d017276_P001 Maize peroxisome 62.28 14.77
Os02t0626400-01 Rice mitochondrion, plasma membrane 62.87 14.62
HORVU2Hr1G089440.9 Barley plasma membrane 67.07 14.6
Os02t0627100-01 Rice plasma membrane 62.28 14.59
TraesCS6B01G258500.1 Wheat extracellular, unclear 62.28 14.57
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 62.28 14.55
Os05t0427400-00 Rice cytosol, peroxisome, plastid 62.28 14.53
EES07175 Sorghum cytosol, peroxisome, plastid 62.28 14.48
Zm00001d017275_P001 Maize extracellular 62.28 14.46
EES05455 Sorghum cytosol, peroxisome, plastid 61.68 14.43
EES07176 Sorghum cytosol, peroxisome, plastid 61.68 14.43
EES07177 Sorghum cytosol, peroxisome, plastid 61.68 14.43
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 61.68 14.43
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 61.68 14.41
Zm00001d051166_P001 Maize extracellular 61.68 14.39
Zm00001d051163_P002 Maize peroxisome 61.68 14.35
TraesCS3B01G027800.1 Wheat mitochondrion 46.71 14.34
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 61.08 14.33
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 61.08 14.33
TraesCS6D01G212500.1 Wheat peroxisome 60.48 14.19
Os04t0518100-01 Rice plasma membrane 59.28 14.0
Os02t0626100-01 Rice extracellular, plasma membrane 56.29 13.41
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 56.29 13.35
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 56.29 13.35
HORVU6Hr1G058820.2 Barley mitochondrion 56.29 13.26
Zm00001d033286_P001 Maize peroxisome 55.09 13.18
GSMUA_Achr1P09070_001 Banana peroxisome 51.5 13.15
EES12521 Sorghum cytosol 55.09 13.09
Zm00001d017274_P001 Maize plasma membrane 53.89 12.8
EES07174 Sorghum cytosol, peroxisome, plastid 53.89 12.78
AT5G04230.2 Thale cress peroxisome 53.29 12.75
Zm00001d051161_P003 Maize plastid 53.29 12.66
Os12t0520200-01 Rice plasma membrane 51.5 12.65
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 49.1 12.58
EER93773 Sorghum peroxisome 52.69 12.41
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 51.5 12.32
CDY15917 Canola cytosol, peroxisome, plastid 50.9 12.18
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 47.31 12.14
GSMUA_Achr2P00240_001 Banana peroxisome 47.31 12.1
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 49.7 12.03
CDY13306 Canola peroxisome 14.97 11.9
Zm00001d003016_P001 Maize plastid 55.69 11.79
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 46.11 11.76
TraesCS3D01G016300.1 Wheat peroxisome 47.9 11.61
TraesCS3D01G016500.1 Wheat peroxisome 47.9 11.61
TraesCS3B01G053900.1 Wheat peroxisome 47.31 11.47
GSMUA_Achr11P... Banana peroxisome 43.71 11.35
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 31.14 8.65
GSMUA_Achr9P15990_001 Banana peroxisome 35.93 8.53
Bra039777.1-P Field mustard peroxisome 16.17 5.29
CDX73567 Canola cytosol 15.57 5.24
CDX78161 Canola cytosol 15.57 5.24
HORVU2Hr1G062750.1 Barley mitochondrion 5.39 4.89
CDX67566 Canola cytosol 14.37 4.89
CDY66761 Canola cytosol, peroxisome, plastid 14.97 4.82
CDX76219 Canola cytosol 14.97 4.79
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 8.98 2.88
CDY18463 Canola peroxisome 3.59 2.28
Zm00001d020933_P001 Maize mitochondrion 1.8 1.42
Zm00001d051164_P001 Maize peroxisome 1.2 1.27
TraesCS5B01G468400.1 Wheat peroxisome 4.19 1.27
HORVU2Hr1G089540.1 Barley peroxisome 1.8 0.64
Zm00001d029015_P001 Maize peroxisome 0.6 0.25
Zm00001d053619_P001 Maize mitochondrion 0.6 0.24
Zm00001d027249_P001 Maize peroxisome 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400055529EnsemblPlantsGene:PGSC0003DMG401021564Gene3D:1.10.274.20Gene3D:1.20.200.10GO:GO:0003674GO:GO:0003824
InterPro:Aromatic_LyaseInterPro:IPR023144InterPro:L-Aspartase-likeInterPro:Phe_NH3-lyase_shielding_dom_sfKEGG:00360+4.3.1.24KEGG:00940+4.3.1.24
PANTHER:PTHR10362PANTHER:PTHR10362:SF32PGSC:PGSC0003DMG401021564SUPFAM:SSF48557UniParc:UPI000294A0CAUniProt:M1BY40
MapMan:35.1:::::
Description
Phenylalanine ammonia-lyase [Source:PGSC_GENE;Acc:PGSC0003DMG401021564]
Coordinates
chr9:+:5539567..5540170
Molecular Weight (calculated)
18783.7 Da
IEP (calculated)
4.774
GRAVY (calculated)
-0.255
Length
167 amino acids
Sequence
(BLAST)
001: MGANGELHPA RFCKKELLQV VDKEYLFAYV DDPCNSNYPL MQKLRQVLVD HAMNNGESEK NVNSSIFQKI VAFEDELKVV LPKEVESARV VVESGNPAIP
101: NRITECRSYP LYRLVREELG TEVLTGEKVR SPGEEIDKVF TAMCNGQIID PLLECLKSWN GAPLPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.