Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- mitochondrion 3
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G053900.1 | Wheat | peroxisome | 98.9 | 78.08 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 98.16 | 77.5 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 96.88 | 76.49 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 95.04 | 74.93 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 13.79 | 73.53 |
| CDY18464 | Canola | peroxisome | 53.12 | 68.32 |
| PGSC0003DMT400080765 | Potato | peroxisome | 52.94 | 66.21 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 47.43 | 65.98 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 56.43 | 65.88 |
| CDX99621 | Canola | mitochondrion | 64.52 | 64.17 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 82.72 | 63.92 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 82.35 | 63.91 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 29.6 | 62.4 |
| Zm00001d051161_P003 | Maize | plastid | 80.51 | 62.3 |
| Zm00001d017274_P001 | Maize | plasma membrane | 80.15 | 62.02 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 80.15 | 61.93 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 25.92 | 61.57 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 40.44 | 60.27 |
| TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 56.25 | 58.85 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 73.16 | 56.37 |
| TraesCS2B01G224000.1 | Wheat | peroxisome | 73.16 | 56.29 |
| TraesCS2B01G398300.2 | Wheat | peroxisome | 37.87 | 55.98 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 14.89 | 55.86 |
| TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 72.43 | 55.65 |
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 71.88 | 55.3 |
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 72.24 | 55.2 |
| TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 72.24 | 55.04 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 69.49 | 55.02 |
| TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 71.51 | 55.02 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 71.88 | 54.84 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 71.69 | 54.7 |
| TraesCS2B01G398000.2 | Wheat | plastid | 71.69 | 54.7 |
| Solyc10g086180.1.1 | Tomato | extracellular | 71.32 | 54.57 |
| AT3G10340.1 | Thale cress | peroxisome | 70.77 | 54.46 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 71.14 | 54.43 |
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 71.32 | 54.34 |
| TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 71.14 | 54.2 |
| TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 71.14 | 54.2 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 68.57 | 54.14 |
| TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 70.77 | 54.0 |
| CDY08611 | Canola | cytosol | 69.85 | 53.82 |
| Bra029831.1-P | Field mustard | cytosol | 69.67 | 53.68 |
| AT3G53260.1 | Thale cress | cytosol | 70.4 | 53.42 |
| CDY00922 | Canola | cytosol | 69.3 | 53.4 |
| TraesCS5B01G468400.1 | Wheat | peroxisome | 53.86 | 53.08 |
| Bra003126.1-P | Field mustard | cytosol | 68.93 | 53.04 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 70.22 | 52.91 |
| TraesCS2B01G020100.1 | Wheat | peroxisome | 66.18 | 52.86 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 69.85 | 52.7 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 69.85 | 52.7 |
| Bra006985.1-P | Field mustard | cytosol | 68.38 | 52.69 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 70.22 | 52.69 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 69.85 | 52.63 |
| CDX67566 | Canola | cytosol | 47.43 | 52.55 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 69.12 | 52.44 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 69.3 | 52.43 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 69.3 | 52.29 |
| CDX78161 | Canola | cytosol | 47.61 | 52.22 |
| CDX73567 | Canola | cytosol | 47.61 | 52.22 |
| AT5G04230.2 | Thale cress | peroxisome | 66.36 | 51.72 |
| Solyc09g007890.1.1 | Tomato | plastid | 67.83 | 51.32 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 65.07 | 50.72 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.07 | 50.72 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 48.16 | 50.48 |
| CDX76219 | Canola | cytosol | 47.98 | 50.0 |
| Bra039777.1-P | Field mustard | peroxisome | 46.14 | 49.22 |
| PGSC0003DMT400055529 | Potato | cytosol | 14.34 | 46.71 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 59.74 | 46.23 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 14.15 | 44.25 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.49 | 43.76 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.32 | 37.88 |
| Bra005221.1-P | Field mustard | peroxisome | 22.61 | 33.15 |
| CDX91331 | Canola | peroxisome | 22.24 | 31.84 |
| CDX74991 | Canola | peroxisome | 22.24 | 31.84 |
| Bra028793.1-P | Field mustard | peroxisome | 15.81 | 29.25 |
| CDY61769 | Canola | peroxisome | 12.87 | 27.67 |
| CDY18463 | Canola | peroxisome | 11.58 | 23.95 |
| CDY13306 | Canola | peroxisome | 9.01 | 23.33 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 2.57 | 8.14 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 4.96 | 7.61 |
| Solyc10g011930.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc10g011920.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 |
| EnsemblPlantsGene:TraesCS3B01G027800 | EnsemblPlants:TraesCS3B01G027800.1 | TIGR:cd00332 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:12086550..12090680
Molecular Weight (calculated)
59232.2 Da
IEP (calculated)
6.698
GRAVY (calculated)
0.042
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVRINTLLQ GYSGIRFEIL EAITKLINKG VHPRIPLRGS ITASGDVVPL AYIAGVLTGR PNAQAVTNDG RMVNATEALK IAGIDGGFFK LNPKEGLAIV
101: NGTAVGSALA AMVLFDCNVL AVLSEILAAM FCEVMYGKLE YTDHLIHKLK HHPGSIEAAA IMEHILVGSS FMVHAKMVNA MDPLLKPKQD RYALRTAPQW
201: LGPQIEVIRA ATKSIEREVN SVNDNPVIDV KRGKALHCGN FQGTPIGVSM DNTRLAIANI GKLMFAQFSE LVNEFYNNGL TSNLAGSRNP SLDYGLKGIE
301: IAMASYCSEL QYLANPVTTH VQSAEQHNQG VNSLGLISAR KTAEAVDILK LMSSTYMVAL CQAVDLRHLE RNIKINVNRC VAEVAKKVLN APSIEEILMA
401: ATDRVDVFSY ADDPCSTNYP LMHKLRSGLL EHALSSRGND EEVLSKISKL EEELGSTLPR EIEAARVAVE KGTAPIPNMI KGSRSFPLYQ FVREELGCVF
501: LTGEKLLAPG EECDKVFVGI SQGKLIDPML ECLKEWNGEP LPIN
101: NGTAVGSALA AMVLFDCNVL AVLSEILAAM FCEVMYGKLE YTDHLIHKLK HHPGSIEAAA IMEHILVGSS FMVHAKMVNA MDPLLKPKQD RYALRTAPQW
201: LGPQIEVIRA ATKSIEREVN SVNDNPVIDV KRGKALHCGN FQGTPIGVSM DNTRLAIANI GKLMFAQFSE LVNEFYNNGL TSNLAGSRNP SLDYGLKGIE
301: IAMASYCSEL QYLANPVTTH VQSAEQHNQG VNSLGLISAR KTAEAVDILK LMSSTYMVAL CQAVDLRHLE RNIKINVNRC VAEVAKKVLN APSIEEILMA
401: ATDRVDVFSY ADDPCSTNYP LMHKLRSGLL EHALSSRGND EEVLSKISKL EEELGSTLPR EIEAARVAVE KGTAPIPNMI KGSRSFPLYQ FVREELGCVF
501: LTGEKLLAPG EECDKVFVGI SQGKLIDPML ECLKEWNGEP LPIN
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.