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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • peroxisome 1
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:peroxisome, plasma membrane
MultiLoc:peroxisome
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G016330.1
HORVU1Hr1G022060.1
HORVU2Hr1G038120.1
HORVU2Hr1G038140.1
HORVU2Hr1G062750.1
HORVU2Hr1G089440.9
HORVU2Hr1G089540.1
HORVU3Hr1G005330.2
HORVU6Hr1G058820.2
HORVU6Hr1G058840.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 HORVU0Hr1G016330.1 AT2G37040.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT2G37040.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT2G37040.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT2G37040.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT2G37040.1 21798944
AT2G37040.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT2G37040.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT2G37040.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT2G37040.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT2G37040.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G10340.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G10340.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G10340.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G10340.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G10340.1 21798944
AT3G53260.1 HORVU0Hr1G016330.1 AT3G53260.1 21798944
AT3G53260.1 HORVU1Hr1G022060.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038120.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G038140.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G062750.1 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089440.9 AT3G53260.1 21798944
AT3G53260.1 HORVU2Hr1G089540.1 AT3G53260.1 21798944
AT3G53260.1 HORVU3Hr1G005330.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058820.2 AT3G53260.1 21798944
AT3G53260.1 HORVU6Hr1G058840.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G027800.1 Wheat mitochondrion 74.93 95.04
TraesCS3A01G029200.1 Wheat peroxisome 93.33 93.47
TraesCS3B01G053900.1 Wheat peroxisome 93.19 93.32
TraesCS3D01G016300.1 Wheat peroxisome 93.04 93.18
Os02t0626100-01 Rice extracellular, plasma membrane 80.29 79.03
Zm00001d051161_P003 Maize plastid 79.28 77.81
Zm00001d017274_P001 Maize plasma membrane 79.13 77.67
EES07174 Sorghum cytosol, peroxisome, plastid 78.84 77.27
Solyc03g036480.1.1 Tomato peroxisome 10.87 73.53
HORVU6Hr1G058820.2 Barley mitochondrion 72.03 70.1
CDY18464 Canola peroxisome 41.88 68.32
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 70.29 68.12
HORVU2Hr1G089540.1 Barley peroxisome 46.23 68.02
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 69.42 67.75
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 68.99 67.33
PGSC0003DMT400055489 Potato mitochondrion 37.97 67.01
PGSC0003DMT400080765 Potato peroxisome 42.17 66.9
Solyc03g036470.1.1 Tomato mitochondrion 22.17 66.81
Solyc03g042560.1.1 Tomato peroxisome 44.93 66.52
CDX67566 Canola cytosol 47.25 66.4
CDX78161 Canola cytosol 47.54 66.13
CDX73567 Canola cytosol 47.39 65.93
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 68.26 65.87
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 65.51 65.79
AT3G10340.1 Thale cress peroxisome 67.1 65.49
Solyc10g086180.1.1 Tomato extracellular 67.39 65.4
CDY66761 Canola cytosol, peroxisome, plastid 49.13 65.32
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 67.1 65.12
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 64.93 65.02
Bra029831.1-P Field mustard cytosol 66.23 64.73
CDY08611 Canola cytosol 66.23 64.73
CDY00922 Canola cytosol 66.09 64.59
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 67.39 64.4
CDX76219 Canola cytosol 48.7 64.37
CDX99621 Canola mitochondrion 51.01 64.35
Bra003126.1-P Field mustard cytosol 65.65 64.07
KRG91925 Soybean cytosol, peroxisome, plastid 66.23 63.74
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 66.67 63.71
Solyc09g007920.2.1 Tomato extracellular, nucleus 66.52 63.66
AT3G53260.1 Thale cress cytosol 66.09 63.6
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 66.81 63.59
Solyc03g078280.1.1 Tomato peroxisome 23.77 63.57
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 66.23 63.56
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 66.38 63.52
Solyc09g007910.2.1 Tomato extracellular, nucleus 66.09 63.25
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 66.09 63.07
Bra006985.1-P Field mustard cytosol 63.91 62.46
HORVU2Hr1G089440.9 Barley plasma membrane 69.42 62.45
Bra039777.1-P Field mustard peroxisome 45.8 61.96
Solyc09g007890.1.1 Tomato plastid 64.49 61.89
AT5G04230.2 Thale cress peroxisome 62.46 61.75
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 61.45 60.74
CDY15917 Canola cytosol, peroxisome, plastid 61.3 60.6
Solyc03g071860.2.1 Tomato endoplasmic reticulum 32.03 60.55
Solyc03g078270.1.1 Tomato endoplasmic reticulum 12.17 57.93
CDY13306 Canola peroxisome 17.1 56.19
Bra005221.1-P Field mustard peroxisome 29.28 54.45
CDY18463 Canola peroxisome 20.58 53.99
CDX74991 Canola peroxisome 28.99 52.63
CDX91331 Canola peroxisome 28.99 52.63
VIT_11s0016g01640.t01 Wine grape peroxisome 50.58 52.48
GSMUA_Achr9P15990_001 Banana peroxisome 52.46 51.49
Solyc10g011930.1.1 Tomato cytosol 9.42 51.18
PGSC0003DMT400055529 Potato cytosol 12.03 49.7
Solyc10g011920.1.1 Tomato cytosol 9.13 49.61
CDY61769 Canola peroxisome 17.68 48.22
Bra028793.1-P Field mustard peroxisome 19.71 46.26
Solyc03g071870.1.1 Tomato peroxisome 11.3 45.35
HORVU2Hr1G062750.1 Barley mitochondrion 12.03 45.11
VIT_11s0016g01660.t01 Wine grape peroxisome 11.3 44.83
VIT_11s0016g01520.t01 Wine grape peroxisome 57.39 44.25
VIT_11s0016g01510.t01 Wine grape peroxisome 11.74 22.82
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
UniProt:A0A287K007InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0016841EnsemblPlantsGene:HORVU3Hr1G005330EnsemblPlants:HORVU3Hr1G005330.2
InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-likePFAM:PF00221PANTHER:PTHR10362PANTHER:PTHR10362:SF11
InterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI000B4727CD:
Description
No Description!
Coordinates
chrchr3H:-:13107105..13112423
Molecular Weight (calculated)
74612.5 Da
IEP (calculated)
6.550
GRAVY (calculated)
0.058
Length
690 amino acids
Sequence
(BLAST)
001: MASNGVVVEN KDPLFWGAAA AELTGSHLDE VKRMVAHFRE PVVTIVGAGL SVGHVAAVAM AKDGSNVVVE LADEARSRVK ACSEWILDSV ANGGDIYGVT
101: TGFGGTSHRR TRDGHGLQVE LVRHLIAGIF GTGRDHELPL EVTRASMLVR INTLLQGYSG IRFEILEAIT KLINKGVHPR IPLRGSITAS GDVVPLAYIA
201: GVLTGRPNAQ AVTHDGRMVD AAEALKMAGI DGGFFKLNPK EGLAIVNGTA VGSALAAMVL FDCNVLAVLS EILAAVFCEV TYGKVEYTDH LIHKLKHHPG
301: SIEAAAIMEH ILAGSSFMIH AKMVNDMDPL LKPKQDRYAL RTAPQWLGPQ IEVIRAATKS IEREVNSVND NPVIDVKRGK ALHCGNFQGT PIGVSMDNTR
401: LAIANIGKLM FAQFSELVNE FYNNGLTSNL AGSRNPSLDY GLKGIEIAMA SYCSELQYLA NPVTTHVQSA EQHNQGVNSL GLISARKTAE AVDMLKLMSS
501: TYMVALCQAV DLRHLERNIK INVSRCVAEV AKKVLNSSSI EEKLAFAVDR VDVFSYADDP CSTNYPLMHK LRSVLLEHAL ASRGGDEDVL SKISKLEEEL
601: GLVLPREIEA ARVAVEKGNA PIPNMIMGSR SFPLYRFVRE ELGCVFLTGE KLLAPGEECD KVFVGISQGK LIDPMLECLK EWNGEPLPIN
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.