Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
23198870
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017274_P001 | Maize | plasma membrane | 98.15 | 98.15 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 97.16 | 97.02 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 91.32 | 91.58 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 89.05 | 88.92 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 89.05 | 88.92 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 88.9 | 88.78 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 62.3 | 80.51 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 78.38 | 79.97 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 78.09 | 79.68 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 78.09 | 79.68 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 77.81 | 79.28 |
| Zm00001d003016_P001 | Maize | plastid | 87.91 | 78.33 |
| HORVU6Hr1G058820.2 | Barley | mitochondrion | 78.52 | 77.86 |
| TraesCS3D01G016500.1 | Wheat | peroxisome | 76.24 | 77.79 |
| TraesCSU01G030700.1 | Wheat | peroxisome | 73.97 | 76.58 |
| Zm00001d017276_P001 | Maize | peroxisome | 74.68 | 74.57 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 10.81 | 74.51 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 74.96 | 73.71 |
| Zm00001d051166_P001 | Maize | extracellular | 74.82 | 73.46 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 23.9 | 73.36 |
| CDY18464 | Canola | peroxisome | 43.95 | 73.05 |
| Zm00001d051163_P002 | Maize | peroxisome | 74.54 | 72.98 |
| Zm00001d003015_P001 | Maize | peroxisome | 73.97 | 72.73 |
| PGSC0003DMT400080765 | Potato | peroxisome | 44.81 | 72.41 |
| Zm00001d017275_P001 | Maize | extracellular | 73.83 | 72.18 |
| Zm00001d029015_P001 | Maize | peroxisome | 40.4 | 71.36 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 47.08 | 71.03 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 71.27 | 70.46 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 39.12 | 70.33 |
| Solyc10g086180.1.1 | Tomato | extracellular | 71.12 | 70.32 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 68.71 | 70.31 |
| AT3G10340.1 | Thale cress | peroxisome | 70.55 | 70.16 |
| CDX67566 | Canola | cytosol | 48.51 | 69.45 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 70.55 | 69.18 |
| CDX78161 | Canola | cytosol | 48.79 | 69.15 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 70.98 | 69.11 |
| CDX73567 | Canola | cytosol | 48.65 | 68.95 |
| Zm00001d033286_P001 | Maize | peroxisome | 68.42 | 68.91 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 70.27 | 68.71 |
| Bra029831.1-P | Field mustard | cytosol | 68.99 | 68.7 |
| CDY00922 | Canola | cytosol | 68.99 | 68.7 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 67.28 | 68.65 |
| AT3G53260.1 | Thale cress | cytosol | 69.99 | 68.62 |
| Bra003126.1-P | Field mustard | cytosol | 68.99 | 68.6 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 50.64 | 68.59 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 70.27 | 68.42 |
| CDY08611 | Canola | cytosol | 68.71 | 68.41 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 69.7 | 67.96 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 69.99 | 67.86 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 24.89 | 67.83 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 69.56 | 67.82 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 69.56 | 67.82 |
| Zm00001d027249_P001 | Maize | peroxisome | 21.48 | 67.71 |
| CDX99621 | Canola | mitochondrion | 52.63 | 67.64 |
| CDX76219 | Canola | cytosol | 50.21 | 67.62 |
| Bra006985.1-P | Field mustard | cytosol | 67.71 | 67.42 |
| Zm00001d020933_P001 | Maize | mitochondrion | 20.06 | 66.82 |
| Solyc09g007890.1.1 | Tomato | plastid | 67.71 | 66.2 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.51 | 65.52 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 34.0 | 65.48 |
| Bra039777.1-P | Field mustard | peroxisome | 47.23 | 65.1 |
| AT5G04230.2 | Thale cress | peroxisome | 64.58 | 65.04 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 64.58 | 65.04 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 64.3 | 64.76 |
| Bra005221.1-P | Field mustard | peroxisome | 32.29 | 61.19 |
| Zm00001d053619_P001 | Maize | mitochondrion | 36.7 | 60.99 |
| CDY18463 | Canola | peroxisome | 22.19 | 59.32 |
| CDX74991 | Canola | peroxisome | 32.01 | 59.21 |
| CDX91331 | Canola | peroxisome | 32.01 | 59.21 |
| CDY13306 | Canola | peroxisome | 17.21 | 57.62 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.19 | 55.19 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 52.06 | 55.04 |
| Zm00001d051164_P001 | Maize | peroxisome | 12.09 | 54.14 |
| PGSC0003DMT400055529 | Potato | cytosol | 12.66 | 53.29 |
| Solyc10g011930.1.1 | Tomato | cytosol | 9.53 | 52.76 |
| Solyc10g011920.1.1 | Tomato | cytosol | 9.53 | 52.76 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 12.66 | 51.74 |
| CDY61769 | Canola | peroxisome | 17.78 | 49.41 |
| Bra028793.1-P | Field mustard | peroxisome | 20.48 | 48.98 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.81 | 47.7 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 59.74 | 46.93 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 12.8 | 25.35 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| UniProt:A0A1D6Q5B1 | ProteinID:AQK53728.1 | InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009698 | GO:GO:0009800 | GO:GO:0009987 |
| GO:GO:0016829 | GO:GO:0016841 | GO:GO:0019748 | GO:GO:0045548 | InterPro:IPR023144 | InterPro:IPR024083 |
| InterPro:L-Aspartase-like | PFAM:PF00221 | ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF11 | InterPro:Phe/His_NH3-lyase_AS |
| InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf | SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI0008438F04 | EnsemblPlantsGene:Zm00001d051161 |
| EnsemblPlants:Zm00001d051161_P003 | EnsemblPlants:Zm00001d051161_T003 | SEG:seg | : | : | : |
Description
phenylalanine ammonia lyase3 phenylalanine ammonia lyase3
Coordinates
chr4:-:146706971..146710589
Molecular Weight (calculated)
75521.5 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.068
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGNGAIVES DPLNWGAAAA ELAGSHLDEV KRMVAQARQP VVKIEGSTLR VGQVAAVASA RDASGVAVEL DEEARPRVKA SSEWILDCIA HGGDIYGVTT
101: GFGGTSHRRT KDGPALQVEL LRHLNAGIFG TGSDGHTLPS EVTRAAMLVR INTLLQGYSG IRFEILEAIT KLLNTGVSPC LPLRGTITAS GDLVPLSYIA
201: GLITGRPNAQ AVTVDGRKVD AAEAFKIAGI EGGFFKLNPK EGLAIVNGTS VGSALAATVM YDANVLAVLS EVLSAVFCEV MNGKPEYTDH LTHKLKHHPG
301: SIEAAAIMEH ILEGSSFMKH AKKVNELDPL LKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREVNSVND NPVIDVHRGK ALHGGNFQGT PIGVSMDNAR
401: LAIANIGKLM FAQFSELVNE FYNNGLTSNL AGSRNPSLDY GFKGTEIAMA SYCSELQYLG NPITNHVQSA EQHNQDVNSL GLVSARKTAE AIDILKLMSS
501: TYIVALCQAV DLRHLEENIK TSVKNTVTQV AKKVLTMNPS GDLSSARFSE KELISAIDRE AVFTYAEDAA SASLPLMQKL RAVLVDHALS SGDAEREPSV
601: FSRITKFEEE LRAVLPQEVE AARVAVAEGT APVANRIADS RSFPLYRFVR EELGCVFLTG EKLKSPGEEC NKVFLGISQG KLVDPMLECL KEWDGKPLPI
701: NIN
101: GFGGTSHRRT KDGPALQVEL LRHLNAGIFG TGSDGHTLPS EVTRAAMLVR INTLLQGYSG IRFEILEAIT KLLNTGVSPC LPLRGTITAS GDLVPLSYIA
201: GLITGRPNAQ AVTVDGRKVD AAEAFKIAGI EGGFFKLNPK EGLAIVNGTS VGSALAATVM YDANVLAVLS EVLSAVFCEV MNGKPEYTDH LTHKLKHHPG
301: SIEAAAIMEH ILEGSSFMKH AKKVNELDPL LKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREVNSVND NPVIDVHRGK ALHGGNFQGT PIGVSMDNAR
401: LAIANIGKLM FAQFSELVNE FYNNGLTSNL AGSRNPSLDY GFKGTEIAMA SYCSELQYLG NPITNHVQSA EQHNQDVNSL GLVSARKTAE AIDILKLMSS
501: TYIVALCQAV DLRHLEENIK TSVKNTVTQV AKKVLTMNPS GDLSSARFSE KELISAIDRE AVFTYAEDAA SASLPLMQKL RAVLVDHALS SGDAEREPSV
601: FSRITKFEEE LRAVLPQEVE AARVAVAEGT APVANRIADS RSFPLYRFVR EELGCVFLTG EKLKSPGEEC NKVFLGISQG KLVDPMLECL KEWDGKPLPI
701: NIN
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [cytosol,peroxisome,plastid]
SUBAcon: [cytosol,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.