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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 97.99 97.99
CDX99621 Canola mitochondrion 75.79 96.71
AT5G04230.2 Thale cress peroxisome 83.67 83.67
Solyc03g036480.1.1 Tomato peroxisome 11.32 77.45
Solyc03g036470.1.1 Tomato mitochondrion 25.36 77.29
CDY00922 Canola cytosol 77.79 76.91
CDY08611 Canola cytosol 77.51 76.63
CDX78161 Canola cytosol 52.58 73.99
CDX73567 Canola cytosol 52.44 73.79
CDX67566 Canola cytosol 51.43 73.12
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 62.75 72.88
GSMUA_Achr1P09070_001 Banana peroxisome 68.05 72.63
CDY66761 Canola cytosol, peroxisome, plastid 53.87 72.45
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 67.19 72.04
Solyc03g042560.1.1 Tomato peroxisome 47.99 71.89
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 51.29 71.89
CDX76219 Canola cytosol 53.72 71.84
PGSC0003DMT400080765 Potato peroxisome 44.7 71.72
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 67.05 71.45
GSMUA_Achr2P00240_001 Banana peroxisome 66.62 71.21
CDY18464 Canola peroxisome 43.12 71.16
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 66.05 70.71
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 69.48 70.6
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 51.86 69.62
KRG91925 Soybean cytosol, peroxisome, plastid 71.49 69.6
CDY61769 Canola peroxisome 25.21 69.57
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 70.77 69.48
Solyc10g086180.1.1 Tomato extracellular 70.63 69.34
HORVU2Hr1G089540.1 Barley peroxisome 46.56 69.3
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 68.05 68.94
GSMUA_Achr11P... Banana peroxisome 63.47 68.9
PGSC0003DMT400055489 Potato mitochondrion 38.54 68.8
TraesCS5B01G468400.1 Wheat peroxisome 54.3 68.66
Solyc09g007910.2.1 Tomato extracellular, nucleus 70.49 68.24
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 70.49 68.14
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 70.34 68.1
Solyc09g007920.2.1 Tomato extracellular, nucleus 70.34 68.1
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 69.91 67.87
Solyc09g007890.1.1 Tomato plastid 69.63 67.59
Solyc03g078270.1.1 Tomato endoplasmic reticulum 14.04 67.59
TraesCS1D01G039300.1 Wheat mitochondrion 50.86 67.36
TraesCS2D01G204400.1 Wheat peroxisome 64.18 67.07
Solyc03g071860.2.1 Tomato endoplasmic reticulum 34.81 66.58
TraesCS2D01G377600.1 Wheat plastid 67.62 66.57
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 67.19 66.34
Solyc03g078280.1.1 Tomato peroxisome 24.5 66.28
OQU81984 Sorghum peroxisome 67.77 66.25
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 67.62 66.2
TraesCS2A01G381100.1 Wheat plastid 67.48 66.06
Os04t0518400-01 Rice extracellular, plasma membrane 67.48 65.97
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 67.34 65.92
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 66.76 65.91
TraesCS1D01G039400.1 Wheat golgi 66.76 65.91
Zm00001d003015_P001 Maize peroxisome 67.48 65.87
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 66.76 65.82
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 66.76 65.82
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 66.62 65.77
TraesCS2B01G224000.1 Wheat peroxisome 66.62 65.77
TraesCS2D01G204700.1 Wheat peroxisome 66.62 65.77
Os05t0427400-00 Rice cytosol, peroxisome, plastid 67.34 65.64
TraesCS2A01G381000.1 Wheat plastid 67.05 65.64
TraesCS2B01G398000.2 Wheat plastid 67.05 65.64
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 67.05 65.64
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 67.05 65.64
TraesCS2D01G218700.1 Wheat peroxisome 66.48 65.63
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 66.48 65.63
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 66.33 65.58
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 66.91 65.5
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 66.91 65.5
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 66.91 65.5
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 66.33 65.49
Os02t0626400-01 Rice mitochondrion, plasma membrane 67.34 65.46
TraesCS2A01G196700.1 Wheat peroxisome 66.19 65.35
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 66.19 65.35
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 66.76 65.27
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 66.62 65.22
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 66.62 65.13
TraesCS3B01G027800.1 Wheat mitochondrion 50.72 65.07
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 66.33 65.03
Zm00001d017274_P001 Maize plasma membrane 65.47 65.01
Zm00001d051163_P002 Maize peroxisome 66.76 64.9
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 66.19 64.89
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 66.33 64.85
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 66.33 64.85
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 66.33 64.85
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 66.19 64.8
Zm00001d017276_P001 Maize peroxisome 65.33 64.77
Os02t0626100-01 Rice extracellular, plasma membrane 65.04 64.76
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 66.05 64.75
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 66.19 64.71
TraesCS6B01G258500.1 Wheat extracellular, unclear 66.19 64.71
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 66.19 64.71
Zm00001d017275_P001 Maize extracellular 66.62 64.67
EES07175 Sorghum cytosol, peroxisome, plastid 66.48 64.62
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 66.19 64.62
Zm00001d051161_P003 Maize plastid 65.04 64.58
TraesCS6D01G212500.1 Wheat peroxisome 65.76 64.47
EES05455 Sorghum cytosol, peroxisome, plastid 65.9 64.43
EES07176 Sorghum cytosol, peroxisome, plastid 65.9 64.43
EES07177 Sorghum cytosol, peroxisome, plastid 65.9 64.43
Os02t0627100-01 Rice plasma membrane 65.76 64.38
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 61.46 64.22
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 65.76 64.2
Os04t0518100-01 Rice plasma membrane 64.9 64.07
EES12521 Sorghum cytosol 64.47 64.01
EES07174 Sorghum cytosol, peroxisome, plastid 64.47 63.92
Zm00001d051166_P001 Maize extracellular 65.47 63.83
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 64.04 63.49
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 63.9 63.35
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 63.9 63.35
Zm00001d029015_P001 Maize peroxisome 36.1 63.32
TraesCS2B01G020100.1 Wheat peroxisome 61.03 62.56
Os02t0626600-00 Rice plasma membrane 64.04 62.52
CDY13306 Canola peroxisome 18.62 61.9
HORVU2Hr1G089440.9 Barley plasma membrane 67.48 61.41
TraesCS3D01G016300.1 Wheat peroxisome 60.6 61.39
Zm00001d033286_P001 Maize peroxisome 61.32 61.32
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 60.6 61.3
TraesCS3A01G029200.1 Wheat peroxisome 60.46 61.25
TraesCS3B01G053900.1 Wheat peroxisome 60.32 61.1
Os12t0520200-01 Rice plasma membrane 59.46 61.03
CDY18463 Canola peroxisome 22.92 60.84
TraesCS3D01G016500.1 Wheat peroxisome 59.89 60.67
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 62.75 60.58
TraesCSU01G030700.1 Wheat peroxisome 58.88 60.53
Zm00001d027249_P001 Maize peroxisome 19.2 60.09
EER93773 Sorghum peroxisome 60.89 59.94
TraesCS2B01G398300.2 Wheat peroxisome 31.52 59.78
Zm00001d020933_P001 Maize mitochondrion 18.05 59.72
TraesCS2A01G212600.1 Wheat cytosol 22.49 59.25
HORVU6Hr1G058820.2 Barley mitochondrion 58.74 57.83
Zm00001d003016_P001 Maize plastid 64.9 57.41
CDX74991 Canola peroxisome 31.09 57.11
CDX91331 Canola peroxisome 31.09 57.11
Solyc10g011930.1.1 Tomato cytosol 9.74 53.54
VIT_11s0016g01640.t01 Wine grape peroxisome 50.29 52.78
GSMUA_Achr9P15990_001 Banana peroxisome 53.15 52.77
Zm00001d053619_P001 Maize mitochondrion 31.81 52.48
Solyc10g011920.1.1 Tomato cytosol 9.46 51.97
Solyc03g071870.1.1 Tomato peroxisome 12.61 51.16
PGSC0003DMT400055529 Potato cytosol 12.18 50.9
Zm00001d051164_P001 Maize peroxisome 11.03 49.04
HORVU2Hr1G062750.1 Barley mitochondrion 12.32 46.74
VIT_11s0016g01520.t01 Wine grape peroxisome 58.02 45.25
VIT_11s0016g01660.t01 Wine grape peroxisome 10.46 41.95
Os12t0461300-00 Rice plastid 15.04 41.5
Os08t0308300-00 Rice plastid 8.6 31.91
VIT_11s0016g01510.t01 Wine grape peroxisome 12.32 24.23
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.274.20Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1
GO:A0A078FSS8UniProt:A0A078FSS8InterPro:Aromatic_LyaseEnsemblPlants:CDY15917ProteinID:CDY15917ProteinID:CDY15917.1
ncoils:CoilInterPro:Fumarase/histidase_NGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006559GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009698GO:GO:0009800GO:GO:0009987GO:GO:0016829GO:GO:0016841
GO:GO:0019748GO:GO:0045548EnsemblPlantsGene:GSBRNA2T00090284001InterPro:IPR023144InterPro:IPR024083InterPro:L-Aspartase-like
PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF30MetaCyc:PWY-1121MetaCyc:PWY-5883
MetaCyc:PWY-6444MetaCyc:PWY-6457InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseInterPro:Phe_NH3-lyase_shielding_dom_sfSUPFAM:SSF48557
TIGRFAMs:TIGR01226UniPathway:UPA00713UniParc:UPI0004EF3991:::
Description
BnaA04g11940DPhenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FSS8]
Coordinates
chrLK032059:+:512968..515422
Molecular Weight (calculated)
77032.3 Da
IEP (calculated)
6.342
GRAVY (calculated)
-0.179
Length
698 amino acids
Sequence
(BLAST)
001: MEFCQPNKNN GSASSDPLNW NVAAEALKGS HVEDVKKMVE DYRKGTVRLG GETLTIGQVA AVASKGTTVE LLEEARAGVK ASSEWVMESI NRGTDTYGIT
101: TGFGSSSRRR TNQGAALQKE LIRYLNTGIF ATGDEDDVLS NILPRPATRA AMLIRVNTLL QGYSGIRFEI LEAITKFLNH KITLRLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSRSVGPS DEILTALEAF KLAGISSPFE LRPKEGLALV NGTAVGSAMA SIVLYEANVL AVFSEVASAM FVEVMHGKPE FTDHLVHKLK
301: HHPGQIEAAA IMEHILDGSS FVKEAIRLHE IDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV LRNKAIHGGN FQGTPIGVAM
401: DNARLAIGSI GKLMFAQFTE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE VPMAAYCSEL QFLANPVTNH VQSTEQHNQD VNSLGLVSSH KTAEAVNILK
501: LMSATYLVAL CQAYDLRHLE DNLKETIKAV VNQTAERHVF TLSKPFLEQN ILGVIDREYV FSYVYDLSSL TNPLMQKLRS ILFDHALAEP EHETDSGFRK
601: IGTFETELKS LLHNEVERVW TEYEKGNFVV ANRIKECRSY PLYRFVREEL ETRLLTGGSV RTPGEDFDEV FKAISKGKLI DPLFECLKEW NGAPIPIS
Best Arabidopsis Sequence Match ( AT5G04230.1 )
(BLAST)
001: MEFRQPNATA LSDPLNWNVA AEALKGSHLE EVKKMVKDYR KGTVQLGGET LTIGQVAAVA SGGPTVELSE EARGGVKASS DWVMESMNRD TDTYGITTGF
101: GSSSRRRTDQ GAALQKELIR YLNAGIFATG NEDDDRSNTL PRPATRAAML IRVNTLLQGY SGIRFEILEA ITTLLNCKIT PLLPLRGTIT ASGDLVPLSY
201: IAGFLIGRPN SRSVGPSGEI LTALEAFKLA GVSSFFELRP KEGLALVNGT AVGSALASTV LYDANILVVF SEVASAMFAE VMQGKPEFTD HLTHKLKHHP
301: GQIEAAAIME HILDGSSYVK EALHLHKIDP LQKPKQDRYA LRTSPQWLGP QIEVIRAATK MIEREINSVN DNPLIDVSRN KAIHGGNFQG TPIGVAMDNT
401: RLALASIGKL MFAQFTELVN DFYNNGLPSN LSGGRNPSLD YGLKGAEVAM ASYCSELQFL ANPVTNHVES ASQHNQDVNS LGLISSRTTA EAVVILKLMS
501: TTYLVALCQA FDLRHLEEIL KKAVNEVVSH TAKSVLAIEP FRKHDDILGV VNREYVFSYV DDPSSLTNPL MQKLRHVLFD KALAEPEGET DTVFRKIGAF
601: EAELKFLLPK EVERVRTEYE NGTFNVANRI KKCRSYPLYR FVRNELETRL LTGEDVRSPG EDFDKVFRAI SQGKLIDPLF ECLKEWNGAP ISIC
Arabidopsis Description
PAL3Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F4JW69]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.