Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G381000.1 | Wheat | plastid | 98.88 | 98.88 |
| TraesCS2A01G381100.1 | Wheat | plastid | 98.46 | 98.46 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 98.04 | 98.04 |
| TraesCS2A01G380800.1 | Wheat | cytosol, peroxisome, plastid | 97.62 | 97.62 |
| TraesCS4A01G401300.1 | Wheat | cytosol, peroxisome, plastid | 94.95 | 94.95 |
| TraesCS1A01G037800.1 | Wheat | cytosol, peroxisome, plastid | 94.67 | 94.54 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 93.55 | 94.34 |
| TraesCS1A01G094900.1 | Wheat | cytosol, peroxisome, plastid | 65.78 | 94.18 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 91.16 | 91.94 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 91.02 | 91.8 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 91.58 | 91.46 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 98.04 | 91.13 |
| OQU81984 | Sorghum | peroxisome | 89.76 | 89.64 |
| TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 82.75 | 88.32 |
| Zm00001d003015_P001 | Maize | peroxisome | 88.36 | 88.11 |
| TraesCS6A01G222700.1 | Wheat | cytosol, peroxisome, plasma membrane | 86.68 | 86.8 |
| TraesCS6A01G222800.1 | Wheat | cytosol, peroxisome, plastid | 86.26 | 86.13 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 31.7 | 85.28 |
| CDY18464 | Canola | peroxisome | 46.98 | 79.2 |
| CDX67566 | Canola | cytosol | 52.59 | 76.37 |
| CDX78161 | Canola | cytosol | 52.88 | 76.01 |
| CDX73567 | Canola | cytosol | 52.88 | 76.01 |
| Bra003126.1-P | Field mustard | cytosol | 74.75 | 75.39 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 54.7 | 75.14 |
| AT3G10340.1 | Thale cress | peroxisome | 73.91 | 74.54 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.46 | 74.52 |
| Bra029831.1-P | Field mustard | cytosol | 73.63 | 74.36 |
| CDX76219 | Canola | cytosol | 54.42 | 74.33 |
| CDY08611 | Canola | cytosol | 73.49 | 74.22 |
| CDY00922 | Canola | cytosol | 73.35 | 74.08 |
| AT3G53260.1 | Thale cress | cytosol | 74.47 | 74.06 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 74.89 | 73.66 |
| Bra006985.1-P | Field mustard | cytosol | 72.93 | 73.65 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 71.81 | 72.73 |
| Bra039777.1-P | Field mustard | peroxisome | 51.19 | 71.57 |
| CDX99621 | Canola | mitochondrion | 54.0 | 70.38 |
| AT5G04230.2 | Thale cress | peroxisome | 67.88 | 69.34 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 65.5 | 67.78 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 65.92 | 67.34 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.78 | 67.19 |
| Bra005221.1-P | Field mustard | peroxisome | 34.5 | 66.31 |
| CDY13306 | Canola | peroxisome | 18.93 | 64.29 |
| CDX74991 | Canola | peroxisome | 34.22 | 64.21 |
| CDX91331 | Canola | peroxisome | 34.22 | 64.21 |
| CDY18463 | Canola | peroxisome | 23.28 | 63.12 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.86 | 57.74 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 54.7 | 55.48 |
| CDY61769 | Canola | peroxisome | 18.79 | 52.96 |
| Bra028793.1-P | Field mustard | peroxisome | 21.74 | 52.72 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 61.85 | 49.27 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.78 | 48.28 |
| TraesCS5A01G558600.1 | Wheat | mitochondrion | 17.11 | 29.12 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.74 | 27.61 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2A01G380900 | EnsemblPlants:TraesCS2A01G380900.1 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr2A:+:624394333..624396596
Molecular Weight (calculated)
77265.6 Da
IEP (calculated)
6.154
GRAVY (calculated)
-0.140
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENAHVAA NGDGLCVAQP ARADPLNWGK AAEELSSSHL EAVKRMVEEY RKPVVTMEGA SLTIAMVAAV AAGSDTRVEL DESARGRVKE SSDWVMNSMM
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGTDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAIKRCVKTV ARKTLSTDTN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLATFE QELRAVLPKE VEAARSAVEN GTAAQQNRIA ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFIAMN QGKHIDALLE
701: CLKEWNGEPL PLC
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGTDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAIKRCVKTV ARKTLSTDTN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLATFE QELRAVLPKE VEAARSAVEN GTAAQQNRIA ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFIAMN QGKHIDALLE
701: CLKEWNGEPL PLC
001: MEFRQPNATA LSDPLNWNVA AEALKGSHLE EVKKMVKDYR KGTVQLGGET LTIGQVAAVA SGGPTVELSE EARGGVKASS DWVMESMNRD TDTYGITTGF
101: GSSSRRRTDQ GAALQKELIR YLNAGIFATG NEDDDRSNTL PRPATRAAML IRVNTLLQGY SGIRFEILEA ITTLLNCKIT PLLPLRGTIT ASGDLVPLSY
201: IAGFLIGRPN SRSVGPSGEI LTALEAFKLA GVSSFFELRP KEGLALVNGT AVGSALASTV LYDANILVVF SEVASAMFAE VMQGKPEFTD HLTHKLKHHP
301: GQIEAAAIME HILDGSSYVK EALHLHKIDP LQKPKQDRYV LGYALRTSPQ WLGPQIEVIR AATKMIEREI NSVNDNPLID VSRNKAIHGG NFQGTPIGVA
401: MDNTRLALAS IGKLMFAQFT ELVNDFYNNG LPSNLSGGRN PSLDYGLKGA EVAMASYCSE LQFLANPVTN HVESASQHNQ DVNSLGLISS RTTAEAVVIL
501: KLMSTTYLVA LCQAFDLRHL EEILKKAVNE VVSHTAKSVL AIEPFRKHDD ILGVVNREYV FSYVDDPSSL TNPLMQKLRH VLFDKALAEP EGETDTVFRK
601: IGAFEAELKF LLPKEVERVR TEYENGTFNV ANRIKKCRSY PLYRFVRNEL ETRLLTGEDV RSPGEDFDKV FRAISQGKLI DPLFECLKEW NGAPISIC
101: GSSSRRRTDQ GAALQKELIR YLNAGIFATG NEDDDRSNTL PRPATRAAML IRVNTLLQGY SGIRFEILEA ITTLLNCKIT PLLPLRGTIT ASGDLVPLSY
201: IAGFLIGRPN SRSVGPSGEI LTALEAFKLA GVSSFFELRP KEGLALVNGT AVGSALASTV LYDANILVVF SEVASAMFAE VMQGKPEFTD HLTHKLKHHP
301: GQIEAAAIME HILDGSSYVK EALHLHKIDP LQKPKQDRYV LGYALRTSPQ WLGPQIEVIR AATKMIEREI NSVNDNPLID VSRNKAIHGG NFQGTPIGVA
401: MDNTRLALAS IGKLMFAQFT ELVNDFYNNG LPSNLSGGRN PSLDYGLKGA EVAMASYCSE LQFLANPVTN HVESASQHNQ DVNSLGLISS RTTAEAVVIL
501: KLMSTTYLVA LCQAFDLRHL EEILKKAVNE VVSHTAKSVL AIEPFRKHDD ILGVVNREYV FSYVDDPSSL TNPLMQKLRH VLFDKALAEP EGETDTVFRK
601: IGAFEAELKF LLPKEVERVR TEYENGTFNV ANRIKKCRSY PLYRFVRNEL ETRLLTGEDV RSPGEDFDKV FRAISQGKLI DPLFECLKEW NGAPISIC
Arabidopsis Description
PAL3Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:F4JW69]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.