Factsheet for AT3G10340.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029831.1-P	Field mustard	cytosol	91.09	91.22
CDY08611	Canola	cytosol	91.09	91.22
CDY00922	Canola	cytosol	89.96	90.08
Solyc03g036470.1.1	Tomato	mitochondrion	27.02	83.41
Solyc03g036480.1.1	Tomato	peroxisome	12.02	83.33
PGSC0003DMT400080765	Potato	peroxisome	50.78	82.53
AT5G04230.2	Thale cress	peroxisome	81.05	82.09
GSMUA_Achr1P09070_001	Banana	peroxisome	75.67	81.8
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	74.96	81.41
Solyc03g042560.1.1	Tomato	peroxisome	53.61	81.33
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	78.92	81.22
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	81.05	80.59
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	74.54	80.46
PGSC0003DMT400055489	Potato	mitochondrion	44.41	80.31
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	73.97	80.21
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	68.03	80.03
Solyc10g086180.1.1	Tomato	extracellular	80.48	80.03
GSMUA_Achr2P00240_001	Banana	peroxisome	73.55	79.63
KRG91925	Soybean	cytosol, peroxisome, plastid	80.62	79.5
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	80.76	79.09
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	80.48	78.92
Solyc09g007910.2.1	Tomato	extracellular, nucleus	80.48	78.92
Solyc09g007920.2.1	Tomato	extracellular, nucleus	80.48	78.92
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	80.76	78.76
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	55.45	78.71
AT3G53260.1	Thale cress	cytosol	79.63	78.52
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	79.63	78.3
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	76.1	78.08
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	57.14	77.69
Solyc09g007890.1.1	Tomato	plastid	78.92	77.61
Solyc03g078280.1.1	Tomato	peroxisome	28.01	76.74
GSMUA_Achr11P...	Banana	peroxisome	69.59	76.52
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	39.46	76.44
TraesCS2D01G204400.1	Wheat	peroxisome	71.71	75.9
TraesCS1D01G039300.1	Wheat	mitochondrion	56.44	75.71
HORVU2Hr1G089540.1	Barley	peroxisome	50.07	75.48
TraesCS5B01G468400.1	Wheat	peroxisome	58.7	75.18
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	15.42	75.17
TraesCS2D01G377600.1	Wheat	plastid	74.96	74.75
Zm00001d017276_P001	Maize	peroxisome	74.4	74.72
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	74.68	74.68
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	74.68	74.58
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	74.54	74.54
OQU81984	Sorghum	peroxisome	75.25	74.51
Os04t0518400-01	Rice	extracellular, plasma membrane	75.25	74.51
TraesCS2A01G381000.1	Wheat	plastid	75.11	74.47
TraesCS2B01G398000.2	Wheat	plastid	75.11	74.47
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	75.11	74.47
Zm00001d003015_P001	Maize	peroxisome	75.25	74.41
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	75.25	74.41
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	74.4	74.4
TraesCS2B01G224000.1	Wheat	peroxisome	74.4	74.4
TraesCS2D01G204700.1	Wheat	peroxisome	74.4	74.4
Os02t0627100-01	Rice	plasma membrane	74.96	74.33
TraesCS2A01G381100.1	Wheat	plastid	74.96	74.33
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	74.96	74.33
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	74.96	74.33
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	74.4	74.29
TraesCS1D01G039400.1	Wheat	golgi	74.26	74.26
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	74.82	74.19
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	74.82	74.19
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	75.11	74.16
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	74.12	74.12
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	74.68	74.05
EES05455	Sorghum	cytosol, peroxisome, plastid	74.68	73.95
EES07176	Sorghum	cytosol, peroxisome, plastid	74.68	73.95
EES07177	Sorghum	cytosol, peroxisome, plastid	74.68	73.95
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	74.68	73.95
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	74.68	73.95
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	73.83	73.94
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	74.54	73.91
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	73.83	73.83
TraesCS2A01G196700.1	Wheat	peroxisome	73.83	73.83
TraesCS2D01G218700.1	Wheat	peroxisome	73.83	73.83
Os02t0626400-01	Rice	mitochondrion, plasma membrane	74.96	73.82
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	74.54	73.81
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	74.26	73.74
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	73.69	73.69
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	74.4	73.67
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	74.4	73.67
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	74.26	73.63
Zm00001d051163_P002	Maize	peroxisome	74.54	73.4
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	73.83	73.31
Zm00001d017275_P001	Maize	extracellular	74.54	73.3
TraesCS6B01G258500.1	Wheat	extracellular, unclear	73.97	73.25
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	73.83	73.21
Zm00001d051166_P001	Maize	extracellular	74.12	73.18
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	73.69	73.17
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	73.97	73.15
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	73.69	72.97
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	73.69	72.97
TraesCS6D01G212500.1	Wheat	peroxisome	73.27	72.75
EES07175	Sorghum	cytosol, peroxisome, plastid	73.83	72.7
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	68.32	72.31
Os02t0626100-01	Rice	extracellular, plasma membrane	71.43	72.04
Os02t0626600-00	Rice	plasma membrane	72.14	71.33
Os04t0518100-01	Rice	plasma membrane	71.15	71.15
Zm00001d017274_P001	Maize	plasma membrane	70.58	70.98
TraesCS3B01G027800.1	Wheat	mitochondrion	54.46	70.77
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	70.44	70.74
EES12521	Sorghum	cytosol	70.3	70.7
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	70.3	70.6
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	70.3	70.6
Zm00001d051161_P003	Maize	plastid	70.16	70.55
TraesCS2B01G020100.1	Wheat	peroxisome	67.89	70.48
Zm00001d029015_P001	Maize	peroxisome	39.46	70.1
TraesCS2B01G398300.2	Wheat	peroxisome	36.35	69.84
EES07174	Sorghum	cytosol, peroxisome, plastid	69.45	69.74
HORVU2Hr1G089440.9	Barley	plasma membrane	75.39	69.49
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	69.73	68.19
TraesCS2A01G212600.1	Wheat	cytosol	25.46	67.92
TraesCS3D01G016300.1	Wheat	peroxisome	65.91	67.63
Zm00001d033286_P001	Maize	peroxisome	66.62	67.48
TraesCS3A01G029200.1	Wheat	peroxisome	65.49	67.2
TraesCS3B01G053900.1	Wheat	peroxisome	65.49	67.2
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	65.49	67.1
PGSC0003DMT400055529	Potato	cytosol	15.84	67.07
Os12t0520200-01	Rice	plasma membrane	64.22	66.76
TraesCSU01G030700.1	Wheat	peroxisome	63.22	65.83
TraesCS3D01G016500.1	Wheat	peroxisome	64.07	65.75
EER93773	Sorghum	peroxisome	65.35	65.16
Zm00001d027249_P001	Maize	peroxisome	20.51	65.02
HORVU6Hr1G058820.2	Barley	mitochondrion	64.07	63.89
Zm00001d020933_P001	Maize	mitochondrion	18.95	63.51
Zm00001d003016_P001	Maize	plastid	70.72	63.37
Solyc03g071870.1.1	Tomato	peroxisome	14.85	61.05
Zm00001d053619_P001	Maize	mitochondrion	35.36	59.1
VIT_11s0016g01640.t01	Wine grape	peroxisome	55.02	58.5
Zm00001d051164_P001	Maize	peroxisome	12.73	57.32
Solyc10g011930.1.1	Tomato	cytosol	10.18	56.69
GSMUA_Achr9P15990_001	Banana	peroxisome	56.29	56.61
Solyc10g011920.1.1	Tomato	cytosol	9.76	54.33
HORVU2Hr1G062750.1	Barley	mitochondrion	13.86	53.26
VIT_11s0016g01660.t01	Wine grape	peroxisome	12.45	50.57
VIT_11s0016g01520.t01	Wine grape	peroxisome	62.8	49.61
Os12t0461300-00	Rice	plastid	16.97	47.43
Os08t0308300-00	Rice	plastid	9.76	36.7
VIT_11s0016g01510.t01	Wine grape	peroxisome	12.59	25.07

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	EntrezGene:820196
MapMan:9.2.1.1.1	ProteinID:AAF02809.1	ProteinID:AEE74893.1	ArrayExpress:AT3G10340	EnsemblPlantsGene:AT3G10340	RefSeq:AT3G10340
TAIR:AT3G10340	RefSeq:AT3G10340-TAIR-G	EnsemblPlants:AT3G10340.1	TAIR:AT3G10340.1	EMBL:AY099657	EMBL:AY303130
InterPro:Aromatic_Lyase	Unigene:At.18429	EMBL:BT000252	ncoils:Coil	InterPro:Fumarase/histidase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006559	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009698	GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841	GO:GO:0019748
GO:GO:0045548	InterPro:IPR023144	InterPro:IPR024083	InterPro:L-Aspartase-like	RefSeq:NP_187645.1	Symbol:PAL4
PFAM:PF00221	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001185	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0020038	PO:PO:0020100
PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF30	InterPro:Phe/His_NH3-lyase_AS
InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	UniProt:Q9SS45	SUPFAM:SSF48557	TIGRFAMs:TIGR01226	UniParc:UPI00000011A7
SEG:seg	:	:	:	:	:

Description

PAL4Phenylalanine ammonia-lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS45]

Coordinates

chr3:+:3203988..3208135

Molecular Weight (calculated)

76924.1 Da

IEP (calculated)

6.217

GRAVY (calculated)

-0.170

Length

707 amino acids

Sequence
(BLAST)

001: MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.