Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 98.87 | 98.87 |
| TraesCS1D01G039300.1 | Wheat | mitochondrion | 72.14 | 96.77 |
| TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 95.47 | 94.67 |
| TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 95.47 | 94.67 |
| TraesCS2D01G377600.1 | Wheat | plastid | 94.77 | 94.5 |
| TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 95.19 | 94.26 |
| TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 94.91 | 94.11 |
| TraesCS2D01G204400.1 | Wheat | peroxisome | 86.42 | 91.47 |
| TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 90.95 | 90.82 |
| TraesCS2D01G204700.1 | Wheat | peroxisome | 90.81 | 90.81 |
| TraesCS2D01G218700.1 | Wheat | peroxisome | 90.52 | 90.52 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 90.38 | 89.5 |
| OQU81984 | Sorghum | peroxisome | 88.97 | 88.1 |
| Zm00001d003015_P001 | Maize | peroxisome | 87.98 | 86.99 |
| TraesCS6D01G212500.1 | Wheat | peroxisome | 85.71 | 85.11 |
| TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 85.57 | 84.73 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 11.74 | 81.37 |
| CDY18464 | Canola | peroxisome | 46.82 | 78.25 |
| PGSC0003DMT400080765 | Potato | peroxisome | 47.95 | 77.93 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 24.89 | 76.86 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 50.64 | 76.82 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 42.43 | 76.73 |
| CDX67566 | Canola | cytosol | 53.04 | 76.37 |
| CDX73567 | Canola | cytosol | 53.32 | 76.01 |
| CDX78161 | Canola | cytosol | 53.32 | 76.01 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 72.84 | 74.96 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 54.88 | 74.76 |
| Bra003126.1-P | Field mustard | cytosol | 74.68 | 74.68 |
| Solyc10g086180.1.1 | Tomato | extracellular | 74.82 | 74.4 |
| CDX76219 | Canola | cytosol | 54.88 | 74.33 |
| AT3G10340.1 | Thale cress | peroxisome | 74.26 | 74.26 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 74.4 | 73.98 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.53 | 73.96 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 75.39 | 73.93 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 75.25 | 73.79 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 75.11 | 73.65 |
| AT3G53260.1 | Thale cress | cytosol | 74.68 | 73.64 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 71.71 | 73.58 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 75.11 | 73.55 |
| CDY08611 | Canola | cytosol | 73.41 | 73.51 |
| Bra029831.1-P | Field mustard | cytosol | 73.41 | 73.51 |
| CDY00922 | Canola | cytosol | 73.27 | 73.37 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 74.4 | 73.36 |
| Bra006985.1-P | Field mustard | cytosol | 73.13 | 73.23 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 26.59 | 72.87 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 73.97 | 72.74 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 74.54 | 72.69 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 72.28 | 72.59 |
| Solyc09g007890.1.1 | Tomato | plastid | 73.13 | 71.91 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 36.78 | 71.23 |
| Bra039777.1-P | Field mustard | peroxisome | 51.34 | 71.18 |
| CDX99621 | Canola | mitochondrion | 54.17 | 70.02 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 66.9 | 68.65 |
| AT5G04230.2 | Thale cress | peroxisome | 67.75 | 68.62 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.86 | 67.59 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 65.91 | 66.76 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.77 | 66.62 |
| TraesCS3D01G016500.1 | Wheat | peroxisome | 64.92 | 66.62 |
| PGSC0003DMT400055529 | Potato | cytosol | 15.7 | 66.47 |
| CDY13306 | Canola | peroxisome | 19.66 | 66.19 |
| Bra005221.1-P | Field mustard | peroxisome | 34.51 | 65.77 |
| CDX74991 | Canola | peroxisome | 34.23 | 63.68 |
| CDX91331 | Canola | peroxisome | 34.23 | 63.68 |
| CDY18463 | Canola | peroxisome | 23.48 | 63.12 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 54.17 | 57.59 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 13.58 | 55.81 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.45 | 55.76 |
| CDY61769 | Canola | peroxisome | 19.09 | 53.36 |
| Bra028793.1-P | Field mustard | peroxisome | 22.07 | 53.06 |
| Solyc10g011930.1.1 | Tomato | cytosol | 9.48 | 52.76 |
| Solyc10g011920.1.1 | Tomato | cytosol | 9.19 | 51.18 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 62.23 | 49.16 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.88 | 48.28 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.58 | 27.04 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS1D01G039400 | EnsemblPlants:TraesCS1D01G039400.1 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr1D:-:19012331..19020800
Molecular Weight (calculated)
76685.8 Da
IEP (calculated)
5.954
GRAVY (calculated)
-0.140
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFENANGLC VAQPARADPL NWGKAAEELS GSHLDAVKRM VEEYRRPVVT MEGASLTIAM VAAVAAGSDT RVELDESARD RVKESSDWVM NSMANGTDSY
101: GVTTGFGATS HRRTKEGGAL QRELIRFLNA GVFGTGGHDH VLPAAATRAA MLVRVNTLLQ GYSGIRFEIL ETVAALLNAN VTPCLPLRGT ITASGDLVPL
201: SYIAGLVTGR ANSVATAPDG SKVNAAEAFK IAGIQHGFFE LQPKEGLAMV NGTAVGSGLA SMVLFEANIL SLLAEVLSAV FCEVMNGKPE YTDHLTHKLK
301: HHPGQIEAAA IMEHILEGSS YMALAKKLGE LDPLMKPKQD RYALRTSPQW LGPQVEVIRA ATKSIEREIN SVNDNPLIDV SRGKAIHGGN FQGTPIGVSM
401: DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLGNPVTNH VQSAEQHNQD VNSLGLISSR KTAEAIDILK
501: LMSSTFMVAL CQAIDLRHLE ENIKDAVKSC VKMAARKTLS TNNNGHLHNA RFCEKDLLLT IDREAVFAYA DDPCSSNYPL MQKMRAVLVE HALANGEAER
601: DVETSVFAKL ATFEQELRAV LPREVEAART SVENGTAAQQ NRITECRSYP LYRFVRKELG TEYLTGEMTR SPGEEVDKVF VAMNQGKHID ALLECLKEWN
701: GEPLPIC
101: GVTTGFGATS HRRTKEGGAL QRELIRFLNA GVFGTGGHDH VLPAAATRAA MLVRVNTLLQ GYSGIRFEIL ETVAALLNAN VTPCLPLRGT ITASGDLVPL
201: SYIAGLVTGR ANSVATAPDG SKVNAAEAFK IAGIQHGFFE LQPKEGLAMV NGTAVGSGLA SMVLFEANIL SLLAEVLSAV FCEVMNGKPE YTDHLTHKLK
301: HHPGQIEAAA IMEHILEGSS YMALAKKLGE LDPLMKPKQD RYALRTSPQW LGPQVEVIRA ATKSIEREIN SVNDNPLIDV SRGKAIHGGN FQGTPIGVSM
401: DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLGNPVTNH VQSAEQHNQD VNSLGLISSR KTAEAIDILK
501: LMSSTFMVAL CQAIDLRHLE ENIKDAVKSC VKMAARKTLS TNNNGHLHNA RFCEKDLLLT IDREAVFAYA DDPCSSNYPL MQKMRAVLVE HALANGEAER
601: DVETSVFAKL ATFEQELRAV LPREVEAART SVENGTAAQQ NRITECRSYP LYRFVRKELG TEYLTGEMTR SPGEEVDKVF VAMNQGKHID ALLECLKEWN
701: GEPLPIC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.