Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055529 | Potato | cytosol | 29.08 | 64.07 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 44.02 | 62.79 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 64.67 | 60.87 |
| CDY18464 | Canola | peroxisome | 63.86 | 55.56 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 15.22 | 54.9 |
| PGSC0003DMT400080765 | Potato | peroxisome | 63.59 | 53.79 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 51.63 | 52.05 |
| TraesCS2A01G381000.1 | Wheat | plastid | 97.83 | 50.49 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 63.59 | 50.21 |
| TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 97.28 | 50.21 |
| TraesCS2B01G398000.2 | Wheat | plastid | 95.92 | 49.51 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 95.92 | 49.51 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 95.11 | 49.09 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 23.1 | 48.85 |
| TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 94.02 | 48.46 |
| TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 93.75 | 48.32 |
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 93.21 | 48.04 |
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 91.58 | 47.67 |
| TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 91.3 | 47.12 |
| Bra005221.1-P | Field mustard | peroxisome | 47.28 | 46.9 |
| TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 89.4 | 46.53 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 96.74 | 46.41 |
| TraesCS2B01G020100.1 | Wheat | peroxisome | 85.87 | 46.4 |
| TraesCS2B01G224000.1 | Wheat | peroxisome | 88.59 | 46.11 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 89.13 | 45.94 |
| TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 88.32 | 45.9 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 88.04 | 45.89 |
| CDX74991 | Canola | peroxisome | 46.74 | 45.26 |
| CDX91331 | Canola | peroxisome | 46.74 | 45.26 |
| OQU81984 | Sorghum | peroxisome | 86.96 | 44.82 |
| Zm00001d003015_P001 | Maize | peroxisome | 85.33 | 43.92 |
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.61 | 42.7 |
| TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 80.71 | 41.6 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 55.98 | 37.87 |
| CDY13306 | Canola | peroxisome | 21.47 | 37.62 |
| Bra003126.1-P | Field mustard | cytosol | 71.47 | 37.2 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 72.28 | 37.1 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 69.02 | 36.97 |
| Bra006985.1-P | Field mustard | cytosol | 70.92 | 36.97 |
| Solyc10g086180.1.1 | Tomato | extracellular | 71.2 | 36.85 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 70.92 | 36.71 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 72.01 | 36.7 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 72.01 | 36.7 |
| CDX99621 | Canola | mitochondrion | 54.35 | 36.56 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 71.47 | 36.48 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 68.21 | 36.43 |
| AT3G53260.1 | Thale cress | cytosol | 70.92 | 36.4 |
| AT3G10340.1 | Thale cress | peroxisome | 69.84 | 36.35 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 71.2 | 36.34 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 71.2 | 36.34 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 70.92 | 36.3 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 71.2 | 36.14 |
| Bra029831.1-P | Field mustard | cytosol | 69.29 | 36.12 |
| CDY08611 | Canola | cytosol | 69.02 | 35.98 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 68.75 | 35.94 |
| CDY00922 | Canola | cytosol | 68.48 | 35.69 |
| Solyc09g007890.1.1 | Tomato | plastid | 69.29 | 35.47 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 62.23 | 33.24 |
| AT5G04230.2 | Thale cress | peroxisome | 62.23 | 32.81 |
| TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 46.2 | 32.69 |
| TraesCS5B01G468400.1 | Wheat | peroxisome | 47.83 | 31.88 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 59.78 | 31.52 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 59.24 | 31.23 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 52.17 | 28.87 |
| Bra028793.1-P | Field mustard | peroxisome | 21.47 | 26.87 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 50.82 | 26.6 |
| CDX78161 | Canola | cytosol | 32.88 | 24.4 |
| CDX67566 | Canola | cytosol | 32.34 | 24.24 |
| CDX73567 | Canola | cytosol | 32.61 | 24.19 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 56.25 | 23.13 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 32.07 | 22.74 |
| Bra039777.1-P | Field mustard | peroxisome | 31.25 | 22.55 |
| CDY61769 | Canola | peroxisome | 15.49 | 22.53 |
| CDX76219 | Canola | cytosol | 31.79 | 22.41 |
| Solyc10g011930.1.1 | Tomato | cytosol | 5.71 | 16.54 |
| Solyc10g011920.1.1 | Tomato | cytosol | 5.71 | 16.54 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 6.25 | 13.37 |
| CDY18463 | Canola | peroxisome | 9.24 | 12.93 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 9.24 | 9.58 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 0.54 | 0.87 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 0.27 | 0.69 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G398300.2 | EnsemblPlantsGene:TraesCS2B01G398300 | Gene3D:1.10.274.20 | Gene3D:1.20.200.10 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:Aromatic_Lyase | InterPro:IPR023144 | InterPro:L-Aspartase-like | InterPro:Phe_NH3-lyase_shielding_dom_sf | KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 |
| PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | PFAM:PF00221 | SUPFAM:SSF48557 | MapMan:9.2.1.1.1 | : |
Description
No Description!
Coordinates
chr2B:+:565188991..565191252
Molecular Weight (calculated)
40611.3 Da
IEP (calculated)
5.322
GRAVY (calculated)
-0.307
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENAHVAA NGDGLCMAQP ARADPLNWGK AAEELSCSHL DAVKRMVEEY RRPGTPIGVS MDNTRLGIAA IGKLMFAQFS ELVNDFYNNG LPSNLSGGRN
101: PSLDYGFKGA EIAMASYCSE LQFLGNPVTN HVQSAEQHNQ DVNSLGLISS RKTAEAIDIL KLMSSTFLVA LCQAIDLRHL EENVKNAVKS CVKTVARKTL
201: STDTNGHLHN ARFCEKDLLL TIDREAVFAY ADDPYSANYP LMQKMRAVLV ENALANGEAE RDVETSVFAK LATFERELRA VLPKEVEAAR SAVENGTATQ
301: QNRIAECRSY PLYRFVRKEL GTEYLTGEKT RSPGEEVDKV FVAMNQGKHI DALLECLKEW NGEPLPLC
101: PSLDYGFKGA EIAMASYCSE LQFLGNPVTN HVQSAEQHNQ DVNSLGLISS RKTAEAIDIL KLMSSTFLVA LCQAIDLRHL EENVKNAVKS CVKTVARKTL
201: STDTNGHLHN ARFCEKDLLL TIDREAVFAY ADDPYSANYP LMQKMRAVLV ENALANGEAE RDVETSVFAK LATFERELRA VLPKEVEAAR SAVENGTATQ
301: QNRIAECRSY PLYRFVRKEL GTEYLTGEKT RSPGEEVDKV FVAMNQGKHI DALLECLKEW NGEPLPLC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.