Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G380800.1 | Wheat | cytosol, peroxisome, plastid | 99.3 | 99.3 |
TraesCS2B01G398000.2 | Wheat | plastid | 99.02 | 99.02 |
TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 97.9 | 97.9 |
TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 97.9 | 97.9 |
TraesCS2D01G377600.1 | Wheat | plastid | 97.34 | 97.88 |
TraesCS1D01G039300.1 | Wheat | mitochondrion | 70.69 | 95.64 |
TraesCS1D01G039400.1 | Wheat | golgi | 94.67 | 95.47 |
TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 95.23 | 95.1 |
TraesCS2D01G204400.1 | Wheat | peroxisome | 87.38 | 93.26 |
TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 92.57 | 93.22 |
TraesCS2D01G204700.1 | Wheat | peroxisome | 92.43 | 93.21 |
TraesCS2D01G218700.1 | Wheat | peroxisome | 92.01 | 92.79 |
Os04t0518400-01 | Rice | extracellular, plasma membrane | 92.29 | 92.16 |
HORVU2Hr1G089440.9 | Barley | plasma membrane | 97.9 | 91.0 |
OQU81984 | Sorghum | peroxisome | 90.04 | 89.92 |
Zm00001d003015_P001 | Maize | peroxisome | 88.64 | 88.39 |
TraesCS6D01G212500.1 | Wheat | peroxisome | 86.68 | 86.8 |
TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 86.4 | 86.27 |
Solyc03g036480.1.1 | Tomato | peroxisome | 11.64 | 81.37 |
CDY18464 | Canola | peroxisome | 46.98 | 79.2 |
PGSC0003DMT400080765 | Potato | peroxisome | 47.97 | 78.62 |
PGSC0003DMT400055489 | Potato | mitochondrion | 42.64 | 77.75 |
Solyc03g036470.1.1 | Tomato | mitochondrion | 24.96 | 77.73 |
Solyc03g042560.1.1 | Tomato | peroxisome | 50.63 | 77.47 |
CDX67566 | Canola | cytosol | 52.88 | 76.78 |
CDX78161 | Canola | cytosol | 53.3 | 76.61 |
CDX73567 | Canola | cytosol | 53.3 | 76.61 |
KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 73.35 | 76.13 |
CDY66761 | Canola | cytosol, peroxisome, plastid | 55.26 | 75.92 |
Bra003126.1-P | Field mustard | cytosol | 75.04 | 75.67 |
Solyc10g086180.1.1 | Tomato | extracellular | 75.04 | 75.25 |
AT3G10340.1 | Thale cress | peroxisome | 74.47 | 75.11 |
PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 74.89 | 75.11 |
CDX76219 | Canola | cytosol | 54.98 | 75.1 |
PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 75.88 | 74.93 |
Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.88 | 74.93 |
Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 75.74 | 74.9 |
KRG91925 | Soybean | cytosol, peroxisome, plastid | 75.32 | 74.9 |
Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 75.6 | 74.76 |
Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 75.6 | 74.76 |
AT3G53260.1 | Thale cress | cytosol | 75.18 | 74.76 |
CDY08611 | Canola | cytosol | 73.91 | 74.65 |
Bra029831.1-P | Field mustard | cytosol | 73.77 | 74.5 |
CDY00922 | Canola | cytosol | 73.77 | 74.5 |
PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 71.67 | 74.17 |
Bra006985.1-P | Field mustard | cytosol | 73.35 | 74.08 |
AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 75.32 | 74.07 |
PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 74.61 | 73.99 |
Solyc03g078280.1.1 | Tomato | peroxisome | 26.65 | 73.64 |
TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 72.37 | 73.3 |
Solyc09g007890.1.1 | Tomato | plastid | 73.77 | 73.16 |
Bra039777.1-P | Field mustard | peroxisome | 51.61 | 72.16 |
Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 36.75 | 71.78 |
CDX99621 | Canola | mitochondrion | 53.86 | 70.2 |
AT5G04230.2 | Thale cress | peroxisome | 68.02 | 69.48 |
TraesCS3D01G016300.1 | Wheat | peroxisome | 66.62 | 68.94 |
Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 13.74 | 67.59 |
TraesCS3D01G016500.1 | Wheat | peroxisome | 64.8 | 67.05 |
CDY15917 | Canola | cytosol, peroxisome, plastid | 65.64 | 67.05 |
Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.5 | 66.91 |
Bra005221.1-P | Field mustard | peroxisome | 34.78 | 66.85 |
PGSC0003DMT400055529 | Potato | cytosol | 15.43 | 65.87 |
CDY13306 | Canola | peroxisome | 19.21 | 65.24 |
CDX74991 | Canola | peroxisome | 34.5 | 64.74 |
CDX91331 | Canola | peroxisome | 34.5 | 64.74 |
CDY18463 | Canola | peroxisome | 23.7 | 64.26 |
VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.86 | 57.74 |
Solyc03g071870.1.1 | Tomato | peroxisome | 13.74 | 56.98 |
GSMUA_Achr9P15990_001 | Banana | peroxisome | 54.84 | 55.62 |
Solyc10g011930.1.1 | Tomato | cytosol | 9.68 | 54.33 |
Solyc10g011920.1.1 | Tomato | cytosol | 9.54 | 53.54 |
CDY61769 | Canola | peroxisome | 18.79 | 52.96 |
Bra028793.1-P | Field mustard | peroxisome | 21.74 | 52.72 |
VIT_11s0016g01520.t01 | Wine grape | peroxisome | 61.85 | 49.27 |
VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.92 | 48.85 |
VIT_11s0016g01510.t01 | Wine grape | peroxisome | 14.03 | 28.17 |
Protein Annotations
KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2D01G377200 | EnsemblPlants:TraesCS2D01G377200.1 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr2D:+:481599478..481602108
Molecular Weight (calculated)
77102.5 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.140
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENGHVAA NGDGLCVAQP ARADPLNWGK AAEELSGSHL DAVKRMVEEY RKPVVTMEGA SLTIAMVAAV AAGSDTRVEL DESARGRVKE SSDWVMNSMM
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG NGNDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETIA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVKTV ARKTLSTNNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLAIFE QELRAVLPKE VEAARGAVEN GTATQQNRIA ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFVAMN QGKHIDALLE
701: CLKGWNGEPL PIC
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG NGNDGHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETIA TLLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRPNSM ATAPDGTKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMML AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND FYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFLVALCQAI DLRHLEENVK NAVKSCVKTV ARKTLSTNNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLAIFE QELRAVLPKE VEAARGAVEN GTATQQNRIA ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFVAMN QGKHIDALLE
701: CLKGWNGEPL PIC
001: MDQIEAMLCG GGEKTKVAVT TKTLADPLNW GLAADQMKGS HLDEVKKMVE EYRRPVVNLG GETLTIGQVA AISTVGGSVK VELAETSRAG VKASSDWVME
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC
Arabidopsis Description
PAL2Phenylalanine ammonia-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P45724]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.