Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G089540.1 | Barley | peroxisome | 74.23 | 82.3 |
| TraesCS5B01G468400.1 | Wheat | peroxisome | 84.42 | 79.53 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 15.58 | 79.41 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 33.27 | 75.55 |
| TraesCS2B01G398000.2 | Wheat | plastid | 95.96 | 69.99 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 95.38 | 69.57 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 95.0 | 69.28 |
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 93.65 | 68.88 |
| TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 93.27 | 68.6 |
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 94.04 | 68.49 |
| TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 94.04 | 68.49 |
| TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 93.08 | 67.88 |
| TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 91.92 | 67.51 |
| TraesCS2B01G224000.1 | Wheat | peroxisome | 91.73 | 67.47 |
| TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 92.31 | 67.23 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 90.96 | 67.0 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 90.77 | 66.11 |
| OQU81984 | Sorghum | peroxisome | 89.62 | 65.27 |
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 88.85 | 64.89 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 18.08 | 64.83 |
| TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 88.65 | 64.57 |
| CDX67566 | Canola | cytosol | 60.96 | 64.56 |
| Zm00001d003015_P001 | Maize | peroxisome | 88.46 | 64.34 |
| CDX73567 | Canola | cytosol | 61.35 | 64.31 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 64.04 | 64.16 |
| CDX78161 | Canola | cytosol | 61.15 | 64.11 |
| CDX76219 | Canola | cytosol | 63.85 | 63.6 |
| TraesCS2B01G020100.1 | Wheat | peroxisome | 83.27 | 63.58 |
| Bra039777.1-P | Field mustard | peroxisome | 58.85 | 60.0 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 76.73 | 58.08 |
| AT3G10340.1 | Thale cress | peroxisome | 77.69 | 57.14 |
| Bra003126.1-P | Field mustard | cytosol | 77.5 | 57.0 |
| Solyc10g086180.1.1 | Tomato | extracellular | 77.5 | 56.68 |
| Bra029831.1-P | Field mustard | cytosol | 76.92 | 56.66 |
| CDY08611 | Canola | cytosol | 76.92 | 56.66 |
| CDY00922 | Canola | cytosol | 76.92 | 56.66 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 78.46 | 56.59 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 78.46 | 56.51 |
| CDY18464 | Canola | peroxisome | 45.96 | 56.5 |
| AT3G53260.1 | Thale cress | cytosol | 77.88 | 56.49 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 74.81 | 56.46 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 77.12 | 56.4 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 78.27 | 56.37 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 78.08 | 56.31 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 78.08 | 56.31 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 58.85 | 56.25 |
| PGSC0003DMT400080765 | Potato | peroxisome | 46.92 | 56.09 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 50.19 | 56.01 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 77.12 | 55.93 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 77.31 | 55.91 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 77.69 | 55.72 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 39.04 | 55.62 |
| CDX99621 | Canola | mitochondrion | 58.46 | 55.58 |
| Bra006985.1-P | Field mustard | cytosol | 75.38 | 55.52 |
| Solyc09g007890.1.1 | Tomato | plastid | 76.73 | 55.49 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 74.42 | 54.97 |
| AT5G04230.2 | Thale cress | peroxisome | 71.15 | 53.01 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 39.42 | 52.43 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 68.85 | 51.96 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 69.62 | 51.86 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 69.04 | 51.43 |
| CDY18463 | Canola | peroxisome | 24.81 | 49.05 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 24.04 | 48.45 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 60.77 | 47.52 |
| TraesCS2B01G398300.2 | Wheat | peroxisome | 32.69 | 46.2 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 61.35 | 45.38 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 68.65 | 39.89 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 13.08 | 39.53 |
| CDY13306 | Canola | peroxisome | 15.58 | 38.57 |
| Bra005221.1-P | Field mustard | peroxisome | 23.27 | 32.61 |
| Solyc10g011930.1.1 | Tomato | cytosol | 7.69 | 31.5 |
| CDX74991 | Canola | peroxisome | 22.69 | 31.05 |
| CDX91331 | Canola | peroxisome | 22.69 | 31.05 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 10.38 | 31.03 |
| Solyc10g011920.1.1 | Tomato | cytosol | 7.5 | 30.71 |
| CDY61769 | Canola | peroxisome | 14.42 | 29.64 |
| Bra028793.1-P | Field mustard | peroxisome | 14.42 | 25.51 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.08 | 19.15 |
| PGSC0003DMT400055529 | Potato | cytosol | 2.88 | 8.98 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS2B01G398100 | EnsemblPlants:TraesCS2B01G398100.1 | TIGR:cd00332 | : |
Description
No Description!
Coordinates
chr2B:+:565039719..565041383
Molecular Weight (calculated)
56052.6 Da
IEP (calculated)
7.677
GRAVY (calculated)
-0.073
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAAVAAGSD TRVELDESAR GRVKESSDWV MNSMMNGTDS YGVTTGFGAT SHRRTKEGGA LQRELIRFLN AGAFGNGSDG HVLPAAATRA AMLVRVNTLL
101: QGYSGIRFEI LETIATLLNA NVTPCLPLRG TITASGDLVP LSYIAGLVTG RPNSMATAPD GTKVNAAEAF KIAGIQHGFF ELQPKEGLAM VNGTAVGSGL
201: ASMVLFEANI LSLLAEVLSV VFCEVMHGKP EYTDHLTHKL KHHPRQIEAA AIMEHILEGS SYMMLAKKLG ELDPLMKPKQ DRYALRTSPQ WLGPQIEVIR
301: AATKSIEREI NSVNDNLLID VSRGKAIHGG NFQGTPIGVS MDNTRLAIAA IGKLMFAQFS ELVNDLYNNG LPSNLSGGHN PSLDYGFKGA EIAMASYCSE
401: LQFLGNPVTN HVQSAEQHNQ DVNSLGLISS RKTAEAIDIL KLMSSTFLVA LCQAIDLRHL EENVKKAVKS CVKTVARKTL STNNNGHLHN ARFCEKDLLL
501: TIDRERCSLT RMTPAASTTH
101: QGYSGIRFEI LETIATLLNA NVTPCLPLRG TITASGDLVP LSYIAGLVTG RPNSMATAPD GTKVNAAEAF KIAGIQHGFF ELQPKEGLAM VNGTAVGSGL
201: ASMVLFEANI LSLLAEVLSV VFCEVMHGKP EYTDHLTHKL KHHPRQIEAA AIMEHILEGS SYMMLAKKLG ELDPLMKPKQ DRYALRTSPQ WLGPQIEVIR
301: AATKSIEREI NSVNDNLLID VSRGKAIHGG NFQGTPIGVS MDNTRLAIAA IGKLMFAQFS ELVNDLYNNG LPSNLSGGHN PSLDYGFKGA EIAMASYCSE
401: LQFLGNPVTN HVQSAEQHNQ DVNSLGLISS RKTAEAIDIL KLMSSTFLVA LCQAIDLRHL EENVKKAVKS CVKTVARKTL STNNNGHLHN ARFCEKDLLL
501: TIDRERCSLT RMTPAASTTH
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.