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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • peroxisome 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:plastid
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_09s0002g04930.t01
VIT_09s0002g05010.t01
VIT_09s0002g05080.t01
VIT_09s0002g05210.t01
VIT_09s0002g08860.t01
VIT_09s0002g08870.t01
VIT_09s0002g08880.t01
VIT_11s0016g01510.t01
VIT_11s0016g01520.t01
VIT_11s0016g01640.t01
VIT_11s0016g01660.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 VIT_11s0016g01510.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01520.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01640.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01660.t01 AT2G37040.1 21798944
AT2G37040.1 VIT_11s0016g01510.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01520.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01640.t01 AT3G10340.1 21798944
AT2G37040.1 VIT_11s0016g01660.t01 AT3G10340.1 21798944
AT3G10340.1 VIT_09s0002g04930.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05010.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05080.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g05210.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08860.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08870.t01 AT1G15670.1 21798944
AT3G10340.1 VIT_09s0002g08880.t01 AT1G15670.1 21798944
AT3G53260.1 VIT_11s0016g01510.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01520.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01640.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01660.t01 AT3G10340.1 21798944
AT3G53260.1 VIT_11s0016g01510.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01520.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01640.t01 AT3G53260.1 21798944
AT3G53260.1 VIT_11s0016g01660.t01 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0016g01660.t01 Wine grape peroxisome 24.36 93.1
VIT_11s0016g01520.t01 Wine grape peroxisome 98.95 73.52
GSMUA_Achr9P15990_001 Banana peroxisome 69.77 66.0
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 47.52 60.77
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 44.66 59.64
VIT_00s2849g00010.t01 Wine grape peroxisome 27.07 58.44
VIT_00s2508g00010.t01 Wine grape cytosol, peroxisome, plastid 40.75 57.78
TraesCS5B01G468400.1 Wheat peroxisome 47.67 57.43
HORVU2Hr1G089540.1 Barley peroxisome 40.0 56.72
VIT_08s0040g01710.t01 Wine grape cytosol, peroxisome, plastid 59.85 56.06
TraesCS2D01G204400.1 Wheat peroxisome 56.09 55.84
CDY18464 Canola peroxisome 35.49 55.79
VIT_16s0039g01100.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 59.55 55.77
VIT_16s0039g01110.t01 Wine grape cytosol, peroxisome, plastid 59.55 55.77
Zm00001d017276_P001 Maize peroxisome 58.95 55.68
VIT_16s0039g01130.t01 Wine grape cytosol, peroxisome, plastid 59.4 55.63
Bra003126.1-P Field mustard cytosol 59.1 55.59
VIT_16s0039g01170.t01 Wine grape cytosol, peroxisome, plastid 59.25 55.49
VIT_16s0039g01240.t01 Wine grape cytosol, peroxisome, plastid 59.25 55.49
VIT_16s0039g01280.t01 Wine grape cytosol, peroxisome, plastid 59.25 55.49
VIT_16s0039g01120.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 59.1 55.35
Zm00001d051163_P002 Maize peroxisome 59.55 55.15
VIT_06s0004g02620.t01 Wine grape cytosol, peroxisome, plastid 59.4 55.09
EES05455 Sorghum cytosol, peroxisome, plastid 59.1 55.04
EES07176 Sorghum cytosol, peroxisome, plastid 59.1 55.04
EES07177 Sorghum cytosol, peroxisome, plastid 59.1 55.04
AT3G10340.1 Thale cress peroxisome 58.5 55.02
TraesCS2D01G204700.1 Wheat peroxisome 58.5 55.02
VIT_16s0039g01360.t01 Wine grape cytosol, peroxisome, plastid 58.65 54.93
TraesCS2A01G196700.1 Wheat peroxisome 58.35 54.88
AT3G53260.1 Thale cress cytosol 59.1 54.81
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 58.35 54.8
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 58.65 54.78
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 58.65 54.78
TraesCS6D01G212500.1 Wheat peroxisome 58.65 54.78
TraesCS6B01G258500.1 Wheat extracellular, unclear 58.8 54.76
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 58.2 54.74
TraesCS2A01G212600.1 Wheat cytosol 21.8 54.72
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 58.8 54.69
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 58.8 54.69
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 58.05 54.67
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 58.65 54.62
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 58.65 54.62
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 58.05 54.6
Os02t0627100-01 Rice plasma membrane 58.5 54.56
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 58.05 54.52
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 58.35 54.49
Os04t0518400-01 Rice extracellular, plasma membrane 58.5 54.48
TraesCS1D01G039300.1 Wheat mitochondrion 43.16 54.46
Os02t0626400-01 Rice mitochondrion, plasma membrane 58.8 54.46
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 57.89 54.46
TraesCS2B01G224000.1 Wheat peroxisome 57.89 54.46
Zm00001d003015_P001 Maize peroxisome 58.5 54.41
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 54.59 54.34
Bra006985.1-P Field mustard cytosol 57.59 54.25
CDY00922 Canola cytosol 57.59 54.25
TraesCS1D01G039400.1 Wheat golgi 57.59 54.17
TraesCS2D01G218700.1 Wheat peroxisome 57.59 54.17
TraesCS2A01G381000.1 Wheat plastid 58.05 54.14
TraesCS2B01G398000.2 Wheat plastid 58.05 54.14
Bra029831.1-P Field mustard cytosol 57.44 54.11
Zm00001d017275_P001 Maize extracellular 58.5 54.1
OQU81984 Sorghum peroxisome 58.05 54.06
EES07175 Sorghum cytosol, peroxisome, plastid 58.35 54.04
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 57.44 54.03
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 57.44 54.03
TraesCS2D01G377600.1 Wheat plastid 57.59 54.02
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 57.89 54.0
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 57.89 54.0
CDY08611 Canola cytosol 57.29 53.97
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 57.89 53.92
Zm00001d051166_P001 Maize extracellular 58.05 53.91
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 57.29 53.89
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 57.74 53.86
TraesCS2A01G381100.1 Wheat plastid 57.74 53.86
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 57.74 53.86
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 57.74 53.86
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 58.65 53.79
CDX67566 Canola cytosol 39.7 53.77
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 58.35 53.74
VIT_16s0039g01300.t01 Wine grape vacuole 59.25 53.68
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 57.59 53.64
Os05t0427400-00 Rice cytosol, peroxisome, plastid 57.74 53.63
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 57.44 53.58
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 57.44 53.58
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 57.44 53.58
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 57.44 53.58
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 57.44 53.5
TraesCS3B01G027800.1 Wheat mitochondrion 43.76 53.49
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 57.29 53.36
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 56.24 53.12
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 56.24 53.12
VIT_13s0019g04460.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 57.74 53.11
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 56.99 53.08
Os02t0626100-01 Rice extracellular, plasma membrane 55.94 53.07
CDX78161 Canola cytosol 39.55 53.02
Os02t0626600-00 Rice plasma membrane 56.99 53.01
CDY66761 Canola cytosol, peroxisome, plastid 41.35 52.99
EES12521 Sorghum cytosol 55.94 52.92
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 55.94 52.84
CDX73567 Canola cytosol 39.4 52.82
Os04t0518100-01 Rice plasma membrane 55.79 52.48
CDX99621 Canola mitochondrion 43.16 52.47
CDX76219 Canola cytosol 41.05 52.3
TraesCS2B01G398300.2 Wheat peroxisome 28.87 52.17
Zm00001d051161_P003 Maize plastid 55.04 52.06
Zm00001d017274_P001 Maize plasma membrane 54.89 51.92
Zm00001d029015_P001 Maize peroxisome 30.98 51.76
EES07174 Sorghum cytosol, peroxisome, plastid 54.59 51.56
AT5G04230.2 Thale cress peroxisome 53.68 51.15
Zm00001d033286_P001 Maize peroxisome 53.68 51.15
TraesCS3A01G029200.1 Wheat peroxisome 52.78 50.94
TraesCS3B01G053900.1 Wheat peroxisome 52.78 50.94
TraesCS3D01G016300.1 Wheat peroxisome 52.78 50.94
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 52.48 50.58
Os12t0520200-01 Rice plasma membrane 51.58 50.44
TraesCS2B01G020100.1 Wheat peroxisome 51.58 50.37
CDY15917 Canola cytosol, peroxisome, plastid 52.78 50.29
Bra039777.1-P Field mustard peroxisome 38.5 50.2
HORVU2Hr1G089440.9 Barley plasma membrane 57.89 50.2
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 52.63 50.14
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 54.14 49.79
EER93773 Sorghum peroxisome 52.78 49.51
CDY18463 Canola peroxisome 19.4 49.05
TraesCSU01G030700.1 Wheat peroxisome 50.08 49.04
TraesCS3D01G016500.1 Wheat peroxisome 50.23 48.48
HORVU6Hr1G058820.2 Barley mitochondrion 50.98 47.81
Zm00001d003016_P001 Maize plastid 56.54 47.66
Zm00001d051164_P001 Maize peroxisome 10.98 46.5
Bra005221.1-P Field mustard peroxisome 25.86 46.36
VIT_16s0039g01320.t01 Wine grape peroxisome 8.87 46.09
CDY13306 Canola peroxisome 14.29 45.24
CDX74991 Canola peroxisome 25.56 44.74
CDX91331 Canola peroxisome 25.56 44.74
Zm00001d020933_P001 Maize mitochondrion 13.68 43.13
HORVU2Hr1G062750.1 Barley mitochondrion 11.28 40.76
Zm00001d053619_P001 Maize mitochondrion 25.86 40.66
VIT_11s0016g01510.t01 Wine grape peroxisome 19.85 37.18
CDY61769 Canola peroxisome 14.14 37.15
Bra028793.1-P Field mustard peroxisome 16.24 36.73
Zm00001d027249_P001 Maize peroxisome 12.18 36.32
Os12t0461300-00 Rice plastid 10.83 28.46
Os08t0308300-00 Rice plastid 7.22 25.53
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1InterPro:Aromatic_Lyase
ProteinID:CBI27856ProteinID:CBI27856.3UniProt:D7TCJ8EMBL:FN595756InterPro:Fumarase/histidase_NGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009698GO:GO:0009800
GO:GO:0009987GO:GO:0016829GO:GO:0016841GO:GO:0019748GO:GO:0045548InterPro:IPR024083
InterPro:L-Aspartase-likePFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF30InterPro:Phe/His_NH3-lyase_AS
InterPro:Phe_NH3-lyaseSUPFAM:SSF48557TIGRFAMs:TIGR01226UniParc:UPI0001BE345CArrayExpress:VIT_11s0016g01640EnsemblPlantsGene:VIT_11s0016g01640
EnsemblPlants:VIT_11s0016g01640.t01SEG:seg::::
Description
Phenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:D7TCJ8]
Coordinates
chr11:+:1318994..1321292
Molecular Weight (calculated)
73183.6 Da
IEP (calculated)
6.217
GRAVY (calculated)
-0.175
Length
665 amino acids
Sequence
(BLAST)
001: MSMSINGVSP SFQSFRPPTL PLPVEEENPF CILGESRHVL APPHWKKAAE ALQCGHFDEV CAMVSQFAHA QTVDIQGTAL TVAQVTALAR GDHVRVALDE
101: AAARGRVTRS ADWVAENISR GTDTYGVTTG FGATSHRRTN KTADLQTELI RFLNAGVIGK ETLPASFSKA AMLVRANTLM QGYSGIRWEI LEAMAKLINL
201: NLIPKLPLRG TITASGDLVP LSYIAGVLTG RHNSKVVTPE GEEITAMEAL KRAGIEAPFQ LQAKEGLALV NGTAVGSAVA ATVCFDANIL GLLAEPKQDR
301: YALRTSPQWL GPQIEVIRMA THSIEREINS VNDNPLIDVS RDLALHGGNF QGTPIGVSMD NLRIAIAAIG KLMFAQFSEL VCDYYNGGLP SNLSGGPNPS
401: LDYGFKGAEI AMAAYCSELQ YLANLVTTHV QSAEQHNQDV NSLGLISARK SAEAVEILNL MSATYMVALC QAVDLRHLEE NMREVVKHLI TQVARKTLYT
501: DEDGTLLESR FCEKELQQVV ENLPVFSYID DPTNPSYTFL PQLRDVLVER ALKDPKSTNS AGYSIFKRIP IFQEELKERL IEEISKARER FDNGDFPIPN
601: RIKKCRTYPI YGFVRKEVGT KLLSGENKVS PGEDIEKFNP EYWGWFEKLR SPSSASNGRV NWDRL
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [cytosol,peroxisome,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.