Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020933_P001 | Maize | mitochondrion | 41.13 | 82.46 |
| Zm00001d027249_P001 | Maize | peroxisome | 41.37 | 78.48 |
| Solyc03g036470.1.1 | Tomato | mitochondrion | 39.01 | 72.05 |
| Zm00001d029015_P001 | Maize | peroxisome | 65.48 | 69.6 |
| Solyc03g078270.1.1 | Tomato | endoplasmic reticulum | 22.7 | 66.21 |
| Zm00001d051164_P001 | Maize | peroxisome | 19.86 | 53.5 |
| CDY18463 | Canola | peroxisome | 32.39 | 52.09 |
| Solyc03g071870.1.1 | Tomato | peroxisome | 19.62 | 48.26 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 57.92 | 47.21 |
| CDX67566 | Canola | cytosol | 54.61 | 47.05 |
| CDX78161 | Canola | cytosol | 55.08 | 46.98 |
| CDX73567 | Canola | cytosol | 54.85 | 46.77 |
| CDX76219 | Canola | cytosol | 57.21 | 46.36 |
| Zm00001d017276_P001 | Maize | peroxisome | 74.7 | 44.89 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 74.94 | 44.34 |
| Solyc10g011930.1.1 | Tomato | cytosol | 13.24 | 44.09 |
| HORVU2Hr1G062750.1 | Barley | mitochondrion | 18.91 | 43.48 |
| Bra039777.1-P | Field mustard | peroxisome | 52.25 | 43.33 |
| CDY13306 | Canola | peroxisome | 21.51 | 43.33 |
| Solyc10g011920.1.1 | Tomato | cytosol | 13.0 | 43.31 |
| Zm00001d051166_P001 | Maize | extracellular | 73.29 | 43.3 |
| Zm00001d003015_P001 | Maize | peroxisome | 70.45 | 41.68 |
| Zm00001d051163_P002 | Maize | peroxisome | 69.98 | 41.23 |
| Zm00001d017275_P001 | Maize | extracellular | 69.74 | 41.03 |
| Zm00001d033286_P001 | Maize | peroxisome | 61.23 | 37.11 |
| Zm00001d017274_P001 | Maize | plasma membrane | 60.99 | 36.7 |
| Zm00001d051161_P003 | Maize | plastid | 60.99 | 36.7 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 60.99 | 35.73 |
| Solyc10g086180.1.1 | Tomato | extracellular | 60.05 | 35.72 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 60.05 | 35.72 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 57.92 | 35.66 |
| Solyc09g007910.2.1 | Tomato | extracellular, nucleus | 60.28 | 35.37 |
| AT3G10340.1 | Thale cress | peroxisome | 59.1 | 35.36 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 60.05 | 35.33 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 60.05 | 35.23 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 60.05 | 35.23 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 57.21 | 35.12 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 59.1 | 34.87 |
| CDY00922 | Canola | cytosol | 58.16 | 34.84 |
| Solyc09g007890.1.1 | Tomato | plastid | 59.1 | 34.77 |
| Bra029831.1-P | Field mustard | cytosol | 57.92 | 34.7 |
| CDY08611 | Canola | cytosol | 57.92 | 34.7 |
| Bra003126.1-P | Field mustard | cytosol | 57.45 | 34.37 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 58.63 | 34.35 |
| AT3G53260.1 | Thale cress | cytosol | 57.68 | 34.03 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 57.92 | 33.79 |
| AT5G04230.2 | Thale cress | peroxisome | 53.9 | 32.66 |
| Bra006985.1-P | Field mustard | cytosol | 54.37 | 32.58 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 52.72 | 31.95 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 52.48 | 31.81 |
| Zm00001d003016_P001 | Maize | plastid | 58.39 | 31.31 |
| CDY61769 | Canola | peroxisome | 18.2 | 30.43 |
| CDX99621 | Canola | mitochondrion | 36.88 | 28.52 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 45.15 | 27.17 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 40.66 | 25.86 |
| Bra028793.1-P | Field mustard | peroxisome | 17.97 | 25.85 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 51.3 | 24.25 |
| Solyc03g042560.1.1 | Tomato | peroxisome | 24.82 | 22.53 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 17.73 | 21.13 |
| CDX91331 | Canola | peroxisome | 18.2 | 20.26 |
| CDX74991 | Canola | peroxisome | 18.2 | 20.26 |
| Bra005221.1-P | Field mustard | peroxisome | 17.49 | 19.95 |
| PGSC0003DMT400080765 | Potato | peroxisome | 19.86 | 19.31 |
| CDY18464 | Canola | peroxisome | 17.49 | 17.49 |
| Solyc03g071860.2.1 | Tomato | endoplasmic reticulum | 14.89 | 17.26 |
| Solyc03g036480.1.1 | Tomato | peroxisome | 3.31 | 13.73 |
| Solyc03g078280.1.1 | Tomato | peroxisome | 6.62 | 10.85 |
| PGSC0003DMT400055489 | Potato | mitochondrion | 9.93 | 10.74 |
| PGSC0003DMT400055529 | Potato | cytosol | 0.24 | 0.6 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d053619_P001 | EnsemblPlants:Zm00001d053619_T001 | EnsemblPlantsGene:Zm00001d053619 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016829 | InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | InterPro:IPR024083 | InterPro:L-Aspartase-like |
| PANTHER:PTHR10362 | PANTHER:PTHR10362:SF31 | PFAM:PF00221 | ProteinID:AQK59919.1 | SEG:seg | SUPFAM:SSF48557 |
| UniParc:UPI0008426ACE | UniProt:A0A1D6QQZ2 | MapMan:9.2.1.1.1 | : | : | : |
Description
Phenylalanine ammonia-lyase 1
Coordinates
chr4:+:236769086..236771223
Molecular Weight (calculated)
45421.4 Da
IEP (calculated)
9.704
GRAVY (calculated)
0.022
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAAVNSSQI SARHGASLPA LPARAGSDEA AAVPGPATAI FQAPVAAAAV VGAPLALPPP RPRMRPPPRY PPWLPRPQHL AVHLRRVLRM VAEYRQPLVK
101: IEGASLSITQ VATGAGEARV KLDESARSRV KASSDWIMNS MMNRTDSYGV TTGFDAMSHR RTKEGGALQR ELIRFLNAGA FGTGTDGHVL PAKATCATML
201: VRINTLLQGY SGIRFEILEA IVKLLNANVT PCLPLRGTVT ASRDLVPLSY IADLVTGREN FVALAPDGSK VNATEAFKIA GIQGGFFELQ PKEGLAMVNG
301: TTLGSGLAST VLFEANILAI LAEVLSAVFC EVMNGKPEYT DHLTHKLKHH PGQIEAAAIM EHILEGSSFM KLAKKLGELD PLMKPKQDRL DYGFKGAEIA
401: MASYCYELQF LGNPVTNHVL KYV
101: IEGASLSITQ VATGAGEARV KLDESARSRV KASSDWIMNS MMNRTDSYGV TTGFDAMSHR RTKEGGALQR ELIRFLNAGA FGTGTDGHVL PAKATCATML
201: VRINTLLQGY SGIRFEILEA IVKLLNANVT PCLPLRGTVT ASRDLVPLSY IADLVTGREN FVALAPDGSK VNATEAFKIA GIQGGFFELQ PKEGLAMVNG
301: TTLGSGLAST VLFEANILAI LAEVLSAVFC EVMNGKPEYT DHLTHKLKHH PGQIEAAAIM EHILEGSSFM KLAKKLGELD PLMKPKQDRL DYGFKGAEIA
401: MASYCYELQF LGNPVTNHVL KYV
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.