Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- mitochondrion 6
- cytosol 1
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G37040.1 | PGSC0003DMT400049886 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055488 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055489 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055529 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055531 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400080548 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400080765 | AT2G37040.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400049886 | AT3G10340.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055488 | AT3G10340.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055489 | AT3G10340.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055529 | AT3G10340.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400055531 | AT3G10340.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400080548 | AT3G10340.1 | 21798944 |
| AT2G37040.1 | PGSC0003DMT400080765 | AT3G10340.1 | 21798944 |
| AT3G10340.1 | PGSC0003DMT400006583 | AT1G15670.1 | 21798944 |
| AT3G10340.1 | PGSC0003DMT400006584 | AT1G15670.1 | 21798944 |
| AT3G10340.1 | PGSC0003DMT400042650 | AT1G15670.1 | 21798944 |
| AT3G10340.1 | PGSC0003DMT400042651 | AT1G15670.1 | 21798944 |
| AT3G10340.1 | PGSC0003DMT400042652 | AT1G15670.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400049886 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055488 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055489 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055529 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055531 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400080548 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400080765 | AT3G10340.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400049886 | AT3G53260.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055488 | AT3G53260.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055489 | AT3G53260.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055529 | AT3G53260.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400055531 | AT3G53260.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400080548 | AT3G53260.1 | 21798944 |
| AT3G53260.1 | PGSC0003DMT400080765 | AT3G53260.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055529 | Potato | cytosol | 38.62 | 90.42 |
| PGSC0003DMT400080765 | Potato | peroxisome | 93.35 | 83.91 |
| CDY18464 | Canola | peroxisome | 81.33 | 75.18 |
| TraesCS2B01G398300.2 | Wheat | peroxisome | 60.87 | 64.67 |
| Solyc09g007920.2.1 | Tomato | extracellular, nucleus | 96.42 | 52.29 |
| Solyc09g007900.2.1 | Tomato | cytosol, endoplasmic reticulum, peroxisome | 96.16 | 52.15 |
| TraesCS1D01G039300.1 | Wheat | mitochondrion | 69.31 | 51.42 |
| PGSC0003DMT400049886 | Potato | nucleus, peroxisome, plastid | 90.28 | 51.23 |
| PGSC0003DMT400055531 | Potato | cytosol, peroxisome, plastid | 93.35 | 50.76 |
| PGSC0003DMT400055488 | Potato | cytosol, peroxisome, plastid | 93.09 | 50.42 |
| PGSC0003DMT400080548 | Potato | cytosol, peroxisome, plastid | 89.77 | 49.37 |
| CDX99621 | Canola | mitochondrion | 69.05 | 49.36 |
| TraesCS3B01G027800.1 | Wheat | mitochondrion | 65.98 | 47.43 |
| KRH34854 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 82.61 | 47.02 |
| VIT_13s0019g04460.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 83.89 | 45.37 |
| TraesCS2D01G204400.1 | Wheat | peroxisome | 76.98 | 45.06 |
| KRG91925 | Soybean | cytosol, peroxisome, plastid | 82.61 | 45.05 |
| Bra006985.1-P | Field mustard | cytosol | 81.33 | 45.04 |
| Bra005221.1-P | Field mustard | peroxisome | 42.71 | 45.01 |
| Bra003126.1-P | Field mustard | cytosol | 80.56 | 44.55 |
| Bra029831.1-P | Field mustard | cytosol | 80.31 | 44.48 |
| CDY08611 | Canola | cytosol | 80.31 | 44.48 |
| AT3G10340.1 | Thale cress | peroxisome | 80.31 | 44.41 |
| AT3G53260.1 | Thale cress | cytosol | 81.33 | 44.35 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 81.84 | 44.32 |
| PGSC0003DMT400060308 | Potato | cytosol, peroxisome, plastid | 80.05 | 44.27 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 81.84 | 44.14 |
| CDY00922 | Canola | cytosol | 79.03 | 43.77 |
| GSMUA_Achr1P09070_001 | Banana | peroxisome | 73.15 | 43.73 |
| GSMUA_Achr5P18560_001 | Banana | cytosol, peroxisome, plastid | 72.89 | 43.71 |
| CDX74991 | Canola | peroxisome | 42.2 | 43.42 |
| CDX91331 | Canola | peroxisome | 42.2 | 43.42 |
| GSMUA_Achr5P03950_001 | Banana | cytosol, peroxisome, plastid | 72.12 | 43.32 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, plastid | 72.12 | 43.05 |
| GSMUA_Achr2P00240_001 | Banana | peroxisome | 71.87 | 43.03 |
| TraesCS5B01G468300.1 | Wheat | cytosol, peroxisome, plastid | 77.75 | 43.0 |
| TraesCS1B01G048400.2 | Wheat | cytosol, peroxisome, plastid | 77.24 | 42.72 |
| TraesCS2D01G218700.1 | Wheat | peroxisome | 77.24 | 42.72 |
| Zm00001d003015_P001 | Maize | peroxisome | 78.01 | 42.66 |
| TraesCS1B01G048300.1 | Wheat | cytosol, peroxisome, plastid | 77.75 | 42.64 |
| TraesCS2B01G398000.2 | Wheat | plastid | 77.75 | 42.64 |
| TraesCS2D01G377200.1 | Wheat | cytosol, peroxisome, plastid | 77.75 | 42.64 |
| TraesCS2D01G377600.1 | Wheat | plastid | 77.24 | 42.6 |
| TraesCS2D01G204700.1 | Wheat | peroxisome | 76.98 | 42.57 |
| TraesCS1B01G122800.1 | Wheat | cytosol, peroxisome, plastid | 76.98 | 42.51 |
| TraesCS2B01G398400.1 | Wheat | cytosol, peroxisome, plastid | 77.49 | 42.5 |
| TraesCS1B01G048500.1 | Wheat | cytosol, peroxisome, plastid | 77.49 | 42.44 |
| HORVU2Hr1G038120.1 | Barley | cytosol, peroxisome, plastid | 76.73 | 42.43 |
| TraesCS1D01G039400.1 | Wheat | golgi | 76.73 | 42.43 |
| TraesCS2B01G224000.1 | Wheat | peroxisome | 76.73 | 42.43 |
| TraesCS2D01G377400.1 | Wheat | cytosol, peroxisome, plastid | 77.24 | 42.36 |
| TraesCS2B01G224300.1 | Wheat | cytosol, peroxisome, plastid | 76.47 | 42.35 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 77.24 | 42.3 |
| TraesCS1B01G048100.1 | Wheat | cytosol, peroxisome, plastid | 77.24 | 42.3 |
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 77.24 | 42.3 |
| TraesCS1D01G039500.1 | Wheat | cytosol, peroxisome, plastid | 77.24 | 42.3 |
| HORVU1Hr1G022060.1 | Barley | cytosol, peroxisome, plastid | 76.47 | 42.29 |
| TraesCS2B01G398200.1 | Wheat | cytosol, peroxisome, plastid | 76.98 | 42.22 |
| TraesCS2D01G377500.1 | Wheat | cytosol, peroxisome, plastid | 76.98 | 42.22 |
| OQU81984 | Sorghum | peroxisome | 76.98 | 42.16 |
| TraesCS1D01G103500.1 | Wheat | cytosol, peroxisome, plastid | 76.21 | 42.09 |
| Os02t0626400-01 | Rice | mitochondrion, plasma membrane | 76.73 | 41.78 |
| Zm00001d017275_P001 | Maize | extracellular | 76.73 | 41.72 |
| Os02t0626600-00 | Rice | plasma membrane | 76.21 | 41.68 |
| Zm00001d051163_P002 | Maize | peroxisome | 76.47 | 41.64 |
| EES07175 | Sorghum | cytosol, peroxisome, plastid | 76.21 | 41.5 |
| HORVU2Hr1G038140.1 | Barley | mitochondrion, plastid | 76.73 | 41.49 |
| Os05t0427400-00 | Rice | cytosol, peroxisome, plastid | 75.96 | 41.48 |
| Zm00001d017276_P001 | Maize | peroxisome | 74.68 | 41.48 |
| TraesCS6B01G258500.1 | Wheat | extracellular, unclear | 75.7 | 41.46 |
| HORVU0Hr1G016330.1 | Barley | cytosol, peroxisome, plastid | 75.7 | 41.4 |
| GSMUA_Achr11P... | Banana | peroxisome | 68.03 | 41.37 |
| EES05455 | Sorghum | cytosol, peroxisome, plastid | 75.45 | 41.32 |
| EES07176 | Sorghum | cytosol, peroxisome, plastid | 75.45 | 41.32 |
| EES07177 | Sorghum | cytosol, peroxisome, plastid | 75.45 | 41.32 |
| TraesCS6D01G212400.1 | Wheat | cytosol, peroxisome, plastid | 75.45 | 41.32 |
| Os02t0627100-01 | Rice | plasma membrane | 75.19 | 41.23 |
| Zm00001d017279_P001 | Maize | cytosol, peroxisome, plastid | 75.19 | 41.12 |
| PGSC0003DMT400014003 | Potato | peroxisome | 70.08 | 41.08 |
| Os04t0518100-01 | Rice | plasma membrane | 74.17 | 41.02 |
| HORVU6Hr1G058840.1 | Barley | cytosol, peroxisome, plasma membrane | 74.68 | 41.01 |
| TraesCS6B01G258600.1 | Wheat | cytosol, peroxisome, plasma membrane | 74.42 | 40.87 |
| GSMUA_Achr8P18960_001 | Banana | cytosol, peroxisome, plastid | 62.66 | 40.77 |
| TraesCS6D01G212500.1 | Wheat | peroxisome | 74.17 | 40.73 |
| Zm00001d051166_P001 | Maize | extracellular | 74.42 | 40.64 |
| AT5G04230.2 | Thale cress | peroxisome | 72.12 | 40.4 |
| TraesCS2B01G020100.1 | Wheat | peroxisome | 70.08 | 40.23 |
| HORVU2Hr1G089440.9 | Barley | plasma membrane | 78.01 | 39.77 |
| TraesCS6B01G258400.2 | Wheat | cytosol, peroxisome, plastid | 71.36 | 39.63 |
| TraesCS6D01G212200.1 | Wheat | extracellular, golgi, unclear | 71.36 | 39.63 |
| EES12521 | Sorghum | cytosol | 71.1 | 39.54 |
| Os02t0626100-01 | Rice | extracellular, plasma membrane | 70.84 | 39.52 |
| TraesCS2B01G398100.1 | Wheat | cytosol, peroxisome, plastid | 52.43 | 39.42 |
| HORVU6Hr1G058820.2 | Barley | mitochondrion | 71.36 | 39.35 |
| Zm00001d017274_P001 | Maize | plasma membrane | 70.59 | 39.26 |
| EES07174 | Sorghum | cytosol, peroxisome, plastid | 70.59 | 39.2 |
| Zm00001d051161_P003 | Maize | plastid | 70.33 | 39.12 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 68.8 | 38.54 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 68.8 | 38.54 |
| Zm00001d033286_P001 | Maize | peroxisome | 68.29 | 38.25 |
| HORVU3Hr1G005330.2 | Barley | cytosol, peroxisome, plasma membrane | 67.01 | 37.97 |
| Os12t0520200-01 | Rice | plasma membrane | 65.73 | 37.79 |
| TraesCS3D01G016300.1 | Wheat | peroxisome | 66.5 | 37.74 |
| TraesCS3B01G053900.1 | Wheat | peroxisome | 66.24 | 37.59 |
| Os12t0461300-00 | Rice | plastid | 24.04 | 37.15 |
| EER93773 | Sorghum | peroxisome | 67.26 | 37.09 |
| TraesCS3D01G016500.1 | Wheat | peroxisome | 64.71 | 36.72 |
| Zm00001d003016_P001 | Maize | plastid | 71.36 | 35.36 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 60.36 | 33.57 |
| TraesCS5B01G468400.1 | Wheat | peroxisome | 46.8 | 33.15 |
| CDX73567 | Canola | cytosol | 40.92 | 32.26 |
| CDX78161 | Canola | cytosol | 40.92 | 32.26 |
| CDX67566 | Canola | cytosol | 39.9 | 31.77 |
| Os08t0308300-00 | Rice | plastid | 15.09 | 31.38 |
| Bra039777.1-P | Field mustard | peroxisome | 39.9 | 30.59 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 40.41 | 30.44 |
| CDX76219 | Canola | cytosol | 40.41 | 30.27 |
| CDY13306 | Canola | peroxisome | 14.07 | 26.19 |
| HORVU2Hr1G089540.1 | Barley | peroxisome | 30.95 | 25.8 |
| Zm00001d029015_P001 | Maize | peroxisome | 24.04 | 23.62 |
| Bra028793.1-P | Field mustard | peroxisome | 16.37 | 21.77 |
| CDY61769 | Canola | peroxisome | 10.74 | 16.6 |
| Zm00001d020933_P001 | Maize | mitochondrion | 6.14 | 11.37 |
| Zm00001d053619_P001 | Maize | mitochondrion | 10.74 | 9.93 |
| HORVU2Hr1G062750.1 | Barley | mitochondrion | 2.56 | 5.43 |
| Zm00001d027249_P001 | Maize | peroxisome | 2.81 | 4.93 |
| CDY18463 | Canola | peroxisome | 1.53 | 2.28 |
| Zm00001d051164_P001 | Maize | peroxisome | 0.77 | 1.91 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 | InterPro:Aromatic_Lyase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0016841 | InterPro:IPR023144 | InterPro:L-Aspartase-like | UniProt:M1BY03 | PFAM:PF00221 | EnsemblPlantsGene:PGSC0003DMG402021549 |
| PGSC:PGSC0003DMG402021549 | EnsemblPlants:PGSC0003DMT400055489 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF32 | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | UniParc:UPI0002968874 | : | : | : |
Description
Phenylalanine ammonia-lyase [Source:PGSC_GENE;Acc:PGSC0003DMG402021549]
Coordinates
chr9:-:5502194..5505885
Molecular Weight (calculated)
43558.5 Da
IEP (calculated)
7.065
GRAVY (calculated)
-0.288
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALMSRQLR SSMKWDPLQK PKQDRYALRT SPQWLGPQIE VIRAATKMIE REINSVNDNP LIDVSRNKAL HGGNFQGTPI GVSMDNTRLA LASIGKLMFA
101: QFSELVNDYY NNGLPSNLTA GRNPSLDYGL KGAEIAMASY CSELQFLANP VTNHVQSAEQ HNQDVNSLGL ISARKTAEAV DILKLMSSTY LVALCQAIDL
201: RHLEENLRNA VKNTVSQVAK RTLTMGANGE LHPARFCEKE LLRVVDREYV FAYADDPCSS TYPLMQKLRQ VLVDHAMKNG ESEKNVNSSI FQKIVAFEDE
301: LKAVLPKEVE SARAMLESGN PVIPNRITEC RSYPLYRLVR QELGSELLTG EKVRSPGEEI DKVFTAMCNG QIIDPLLECL KSWNGAPLPI C
101: QFSELVNDYY NNGLPSNLTA GRNPSLDYGL KGAEIAMASY CSELQFLANP VTNHVQSAEQ HNQDVNSLGL ISARKTAEAV DILKLMSSTY LVALCQAIDL
201: RHLEENLRNA VKNTVSQVAK RTLTMGANGE LHPARFCEKE LLRVVDREYV FAYADDPCSS TYPLMQKLRQ VLVDHAMKNG ESEKNVNSSI FQKIVAFEDE
301: LKAVLPKEVE SARAMLESGN PVIPNRITEC RSYPLYRLVR QELGSELLTG EKVRSPGEEI DKVFTAMCNG QIIDPLLECL KSWNGAPLPI C
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.