CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY36579
CDY53309
CDY58028
CDY69686

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10340.1	CDY36579	AT1G15670.1	21798944
AT3G10340.1	CDY53309	AT1G15670.1	21798944
AT3G10340.1	CDY58028	AT1G15670.1	21798944
AT3G10340.1	CDY69686	AT1G15670.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029831.1-P	Field mustard	cytosol	98.87	98.87
CDY00922	Canola	cytosol	97.59	97.59
AT3G10340.1	Thale cress	peroxisome	91.22	91.09
Solyc03g036480.1.1	Tomato	peroxisome	12.18	84.31
GSMUA_Achr1P09070_001	Banana	peroxisome	76.06	82.11
CDY18464	Canola	peroxisome	49.15	82.03
PGSC0003DMT400080765	Potato	peroxisome	50.28	81.61
Solyc03g042560.1.1	Tomato	peroxisome	53.4	80.9
Solyc03g036470.1.1	Tomato	mitochondrion	26.2	80.79
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	74.36	80.65
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	78.33	80.49
CDX78161	Canola	cytosol	56.52	80.44
PGSC0003DMT400055489	Potato	mitochondrion	44.48	80.31
CDX73567	Canola	cytosol	56.37	80.24
CDX67566	Canola	cytosol	55.67	80.04
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	67.99	79.87
GSMUA_Achr2P00240_001	Banana	peroxisome	73.8	79.79
CDY66761	Canola	cytosol, peroxisome, plastid	58.64	79.77
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	73.8	79.54
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	73.23	79.29
CDX76219	Canola	cytosol	58.5	79.12
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	79.6	79.04
Solyc10g086180.1.1	Tomato	extracellular	79.18	78.62
CDX99621	Canola	mitochondrion	60.76	78.43
Solyc09g007910.2.1	Tomato	extracellular, nucleus	80.03	78.36
Solyc09g007920.2.1	Tomato	extracellular, nucleus	80.03	78.36
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	80.03	78.25
KRG91925	Soybean	cytosol, peroxisome, plastid	79.46	78.24
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	79.89	78.22
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	54.96	77.91
CDY15917	Canola	cytosol, peroxisome, plastid	76.63	77.51
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	75.64	77.5
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	78.75	77.33
Solyc09g007890.1.1	Tomato	plastid	78.47	77.05
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	56.66	76.92
Solyc03g078280.1.1	Tomato	peroxisome	27.76	75.97
GSMUA_Achr11P...	Banana	peroxisome	69.12	75.89
HORVU2Hr1G089540.1	Barley	peroxisome	50.14	75.48
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	38.95	75.34
TraesCS2D01G204400.1	Wheat	peroxisome	70.82	74.85
TraesCS5B01G468400.1	Wheat	peroxisome	58.5	74.82
TraesCS2D01G377600.1	Wheat	plastid	74.93	74.61
TraesCS1D01G039300.1	Wheat	mitochondrion	55.67	74.57
TraesCS2A01G381100.1	Wheat	plastid	74.79	74.05
Os04t0518400-01	Rice	extracellular, plasma membrane	74.79	73.95
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	74.65	73.91
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	74.5	73.77
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	73.8	73.69
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	73.8	73.69
TraesCS2B01G224000.1	Wheat	peroxisome	73.8	73.69
TraesCS2D01G204700.1	Wheat	peroxisome	73.8	73.69
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	73.8	73.69
OQU81984	Sorghum	peroxisome	74.5	73.67
TraesCS2A01G381000.1	Wheat	plastid	74.36	73.63
TraesCS2B01G398000.2	Wheat	plastid	74.36	73.63
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	74.36	73.63
Zm00001d017276_P001	Maize	peroxisome	73.37	73.58
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	74.22	73.49
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	74.5	73.46
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	73.65	73.45
Zm00001d003015_P001	Maize	peroxisome	74.36	73.43
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	73.51	73.41
TraesCS1D01G039400.1	Wheat	golgi	73.51	73.41
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	73.37	73.37
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	74.08	73.35
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	74.08	73.35
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	74.08	73.35
TraesCS2D01G218700.1	Wheat	peroxisome	73.37	73.27
Os02t0626400-01	Rice	mitochondrion, plasma membrane	74.5	73.26
Os02t0627100-01	Rice	plasma membrane	73.94	73.21
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	73.37	73.16
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	73.23	73.13
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	73.94	73.11
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	73.09	72.98
TraesCS2A01G196700.1	Wheat	peroxisome	73.09	72.98
EES05455	Sorghum	cytosol, peroxisome, plastid	73.8	72.97
EES07176	Sorghum	cytosol, peroxisome, plastid	73.8	72.97
EES07177	Sorghum	cytosol, peroxisome, plastid	73.8	72.97
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	73.8	72.97
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	73.65	72.93
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	73.8	72.87
CDY13306	Canola	peroxisome	21.67	72.86
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	73.65	72.83
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	73.65	72.83
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	73.37	72.75
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	73.51	72.69
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	73.51	72.69
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	73.23	72.61
TraesCS6B01G258500.1	Wheat	extracellular, unclear	73.37	72.55
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	73.37	72.55
Zm00001d017275_P001	Maize	extracellular	73.8	72.46
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	73.37	72.45
Zm00001d051163_P002	Maize	peroxisome	73.65	72.42
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	14.87	72.41
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	73.09	72.37
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	72.95	72.33
EES07175	Sorghum	cytosol, peroxisome, plastid	73.51	72.28
Zm00001d051166_P001	Maize	extracellular	73.23	72.21
TraesCS6D01G212500.1	Wheat	peroxisome	72.66	72.05
CDX74991	Canola	peroxisome	38.67	71.84
CDX91331	Canola	peroxisome	38.53	71.58
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	67.56	71.41
Os02t0626600-00	Rice	plasma membrane	71.1	70.21
TraesCS2B01G020100.1	Wheat	peroxisome	67.42	69.9
TraesCS3B01G027800.1	Wheat	mitochondrion	53.82	69.85
Os04t0518100-01	Rice	plasma membrane	69.69	69.59
CDY18463	Canola	peroxisome	25.92	69.58
Os02t0626100-01	Rice	extracellular, plasma membrane	68.98	69.47
Zm00001d029015_P001	Maize	peroxisome	39.09	69.35
Zm00001d017274_P001	Maize	plasma membrane	68.84	69.13
TraesCS2B01G398300.2	Wheat	peroxisome	35.98	69.02
HORVU2Hr1G089440.9	Barley	plasma membrane	74.65	68.71
EES12521	Sorghum	cytosol	68.41	68.71
Zm00001d051161_P003	Maize	plastid	68.41	68.71
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	68.41	68.61
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	68.41	68.61
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	68.41	68.61
EES07174	Sorghum	cytosol, peroxisome, plastid	67.85	68.04
PGSC0003DMT400055529	Potato	cytosol	16.01	67.66
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	68.98	67.36
TraesCS2A01G212600.1	Wheat	cytosol	25.21	67.17
Zm00001d033286_P001	Maize	peroxisome	66.29	67.05
TraesCS3A01G029200.1	Wheat	peroxisome	65.01	66.62
TraesCS3B01G053900.1	Wheat	peroxisome	65.01	66.62
TraesCS3D01G016300.1	Wheat	peroxisome	65.01	66.62
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	64.73	66.23
Os12t0520200-01	Rice	plasma membrane	63.31	65.74
TraesCSU01G030700.1	Wheat	peroxisome	62.61	65.1
Zm00001d027249_P001	Maize	peroxisome	20.54	65.02
EER93773	Sorghum	peroxisome	65.16	64.88
TraesCS3D01G016500.1	Wheat	peroxisome	63.03	64.59
CDY61769	Canola	peroxisome	22.95	64.03
Zm00001d020933_P001	Maize	mitochondrion	18.7	62.56
HORVU6Hr1G058820.2	Barley	mitochondrion	62.61	62.34
Solyc03g071870.1.1	Tomato	peroxisome	15.01	61.63
Zm00001d003016_P001	Maize	plastid	68.56	61.34
Zm00001d053619_P001	Maize	mitochondrion	34.7	57.92
Solyc10g011930.1.1	Tomato	cytosol	10.34	57.48
VIT_11s0016g01640.t01	Wine grape	peroxisome	53.97	57.29
Zm00001d051164_P001	Maize	peroxisome	12.61	56.69
Solyc10g011920.1.1	Tomato	cytosol	10.06	55.91
GSMUA_Achr9P15990_001	Banana	peroxisome	55.38	55.62
HORVU2Hr1G062750.1	Barley	mitochondrion	14.16	54.35
VIT_11s0016g01660.t01	Wine grape	peroxisome	12.18	49.43
VIT_11s0016g01520.t01	Wine grape	peroxisome	61.47	48.49
Os12t0461300-00	Rice	plastid	16.71	46.64
Os08t0308300-00	Rice	plastid	9.35	35.11
VIT_11s0016g01510.t01	Wine grape	peroxisome	12.61	25.07

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:9.2.1.1.1
GO:A0A078F5F6	UniProt:A0A078F5F6	InterPro:Aromatic_Lyase	EnsemblPlants:CDY08611	ProteinID:CDY08611	ProteinID:CDY08611.1
InterPro:Fumarase/histidase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006559	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009698	GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841	GO:GO:0019748
GO:GO:0045548	EnsemblPlantsGene:GSBRNA2T00000405001	InterPro:IPR023144	InterPro:IPR024083	InterPro:L-Aspartase-like	PFAM:PF00221
ScanProsite:PS00488	PANTHER:PTHR10362	PANTHER:PTHR10362:SF30	MetaCyc:PWY-1121	MetaCyc:PWY-5883	MetaCyc:PWY-6444
MetaCyc:PWY-6457	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557	TIGRFAMs:TIGR01226
UniPathway:UPA00713	UniParc:UPI0004EE2ECC	SEG:seg	:	:	:

Description

BnaA05g28470DPhenylalanine ammonia-lyase [Source:UniProtKB/TrEMBL;Acc:A0A078F5F6]

Coordinates

chrLK031986:-:917152..920781

Molecular Weight (calculated)

76767.0 Da

IEP (calculated)

6.058

GRAVY (calculated)

-0.130

Length

706 amino acids

Sequence
(BLAST)

001: MDLCKQNNNH IVAVSADPLN WNAAAEALKG SHLEEVKRMV EDYRKGAVRL GGETLTIGQV AAVASGGVTV ELAEEARAGV KASSDWVMES MNRGTDSYGV
101: TTGFGATSHR RTKQGGALQK ELIRFLNAGI FGAGVGDTSL TLPKSATRAA MLVRVNTLLQ GYSGIRFEIL EAITKLLNNE ITPCIPLRGS ITASGDLVPL
201: SYIAGLLTGR PNSKAVGPAG ETLTASDAFK LAGVPSFFEL QPKEGLALVN GTGVGSGLAS MVLFETNVLA VLSEVMSAMF AEVMQGKPEF TDHLTHKLKH
301: HPGQIEAAAI MEHILHGSSY VKEAQQLHEL DPLQKPKQDR YALRTSPQWL GPQIEVIRAA TKMIEREINS VNDNPLIDVS RNKALHGGNF QGTPIGVAMD
401: NTRLAIASIG KLMFAQFSEL VNDFYNNGLP SNLSGGRNPS LDYGFKGAEI AMASYCSELQ FLANPVTNHV QSAEQHNQDV NSLGLISSRK TEEAVDILKL
501: MSTTYLVALC QAVDLRHIEE NLKKAVKAAV SQVAKRVLTV GVNGELHPSR FTERDVLQVV DREHVFSYAD DPCSFAYPLM QRLRHILVDH ALEDPEREAN
601: VSTSVFQKIG AFEAELKVVL PKEVERVRGE YEGGCSVIGN RIKECRSYPL YRFVREELET ELLSGESVRS PGEEFDKVFS AICDGKVIDP LLECLKEWNG
701: APVPIC

Best Arabidopsis Sequence Match ( AT3G10340.1 )
(BLAST)

001: MELCNQNNHI TAVSGDPLNW NATAEALKGS HLDEVKRMVK EYRKEAVKLG GETLTIGQVA AVARGGGGST VELAEEARAG VKASSEWVME SMNRGTDSYG
101: VTTGFGATSH RRTKQGGALQ NELIRFLNAG IFGPGAGDTS HTLPKPTTRA AMLVRVNTLL QGYSGIRFEI LEAITKLLNH EITPCLPLRG TITASGDLVP
201: LSYIAGLLTG RPNSKAVGPS GETLTASEAF KLAGVSSFFE LQPKEGLALV NGTAVGSGLA STVLFDANIL AVLSEVMSAM FAEVMQGKPE FTDHLTHKLK
301: HHPGQIEAAA IMEHILDGSS YVKEAQLLHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRA ATKMIEREIN SVNDNPLIDV SRNKALHGGN FQGTPIGVAM
401: DNSRLAIASI GKLMFAQFSE LVNDFYNNGL PSNLSGGRNP SLDYGFKGAE IAMASYCSEL QFLANPVTNH VQSAEQHNQD VNSLGLISSR KTAEAVDILK
501: LMSTTYLVAL CQAVDLRHLE ENLKKAVKSA VSQVAKRVLT VGANGELHPS RFTERDVLQV VDREYVFSYA DDPCSLTYPL MQKLRHILVD HALADPEREA
601: NSATSVFHKI GAFEAELKLL LPKEVERVRV EYEEGTSAIA NRIKECRSYP LYRFVRDELN TELLTGENVR SPGEEFDKVF LAISDGKLID PLLECLKEWN
701: GAPVSIC

Arabidopsis Description

PAL4Phenylalanine ammonia-lyase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS45]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.