Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G039300.1 | Wheat | mitochondrion | 73.07 | 98.86 |
| TraesCS1A01G037700.1 | Wheat | cytosol, peroxisome, plastid | 96.77 | 97.6 |
| TraesCS1B01G048200.1 | Wheat | cytosol, peroxisome, plastid | 97.48 | 97.34 |
| TraesCS2A01G381000.1 | Wheat | plastid | 95.65 | 95.65 |
| TraesCS2A01G381100.1 | Wheat | plastid | 95.23 | 95.23 |
| TraesCS2A01G380800.1 | Wheat | cytosol, peroxisome, plastid | 95.23 | 95.23 |
| TraesCS2A01G380900.1 | Wheat | cytosol, peroxisome, plastid | 94.95 | 94.95 |
| TraesCS1A01G037800.1 | Wheat | cytosol, peroxisome, plastid | 94.39 | 94.26 |
| TraesCS1A01G094900.1 | Wheat | cytosol, peroxisome, plastid | 65.08 | 93.17 |
| TraesCS2A01G196700.1 | Wheat | peroxisome | 90.04 | 90.81 |
| Os04t0518400-01 | Rice | extracellular, plasma membrane | 90.46 | 90.34 |
| TraesCS2A01G212900.1 | Wheat | cytosol, peroxisome, plastid | 89.48 | 90.24 |
| OQU81984 | Sorghum | peroxisome | 88.64 | 88.52 |
| Zm00001d003015_P001 | Maize | peroxisome | 87.66 | 87.41 |
| TraesCS6A01G222700.1 | Wheat | cytosol, peroxisome, plasma membrane | 87.24 | 87.36 |
| TraesCS2A01G196400.1 | Wheat | mitochondrion, plastid | 81.63 | 87.13 |
| TraesCS6A01G222800.1 | Wheat | cytosol, peroxisome, plastid | 85.97 | 85.85 |
| TraesCS2A01G212600.1 | Wheat | cytosol | 31.42 | 84.53 |
| CDY18464 | Canola | peroxisome | 46.7 | 78.72 |
| CDX67566 | Canola | cytosol | 52.59 | 76.37 |
| CDX78161 | Canola | cytosol | 53.02 | 76.21 |
| CDX73567 | Canola | cytosol | 53.02 | 76.21 |
| Bra003126.1-P | Field mustard | cytosol | 74.61 | 75.25 |
| CDY66761 | Canola | cytosol, peroxisome, plastid | 54.56 | 74.95 |
| Bra017210.1-P | Field mustard | cytosol, peroxisome, plastid | 75.46 | 74.52 |
| AT3G10340.1 | Thale cress | peroxisome | 73.63 | 74.26 |
| CDX76219 | Canola | cytosol | 54.28 | 74.14 |
| AT3G53260.1 | Thale cress | cytosol | 74.33 | 73.92 |
| Bra029831.1-P | Field mustard | cytosol | 72.93 | 73.65 |
| CDY08611 | Canola | cytosol | 72.93 | 73.65 |
| CDY00922 | Canola | cytosol | 72.79 | 73.51 |
| Bra006985.1-P | Field mustard | cytosol | 72.79 | 73.51 |
| AT2G37040.1 | Thale cress | cytosol, peroxisome, plastid | 74.33 | 73.1 |
| TraesCS6A01G222900.1 | Wheat | extracellular, golgi, unclear | 71.67 | 72.59 |
| Bra039777.1-P | Field mustard | peroxisome | 51.05 | 71.37 |
| CDX99621 | Canola | mitochondrion | 53.58 | 69.84 |
| AT5G04230.2 | Thale cress | peroxisome | 67.46 | 68.91 |
| TraesCS3A01G029200.1 | Wheat | peroxisome | 65.5 | 67.78 |
| CDY15917 | Canola | cytosol, peroxisome, plastid | 65.22 | 66.62 |
| Bra030322.1-P | Field mustard | cytosol, peroxisome, plastid | 65.08 | 66.48 |
| Bra005221.1-P | Field mustard | peroxisome | 34.36 | 66.04 |
| CDY13306 | Canola | peroxisome | 19.35 | 65.71 |
| CDX91331 | Canola | peroxisome | 34.08 | 63.95 |
| CDX74991 | Canola | peroxisome | 34.08 | 63.95 |
| CDY18463 | Canola | peroxisome | 23.42 | 63.5 |
| VIT_11s0016g01640.t01 | Wine grape | peroxisome | 53.86 | 57.74 |
| GSMUA_Achr9P15990_001 | Banana | peroxisome | 55.12 | 55.9 |
| CDY61769 | Canola | peroxisome | 18.65 | 52.57 |
| Bra028793.1-P | Field mustard | peroxisome | 21.6 | 52.38 |
| VIT_11s0016g01520.t01 | Wine grape | peroxisome | 61.85 | 49.27 |
| VIT_11s0016g01660.t01 | Wine grape | peroxisome | 11.78 | 48.28 |
| TraesCS5A01G558600.1 | Wheat | mitochondrion | 17.39 | 29.59 |
| VIT_11s0016g01510.t01 | Wine grape | peroxisome | 13.88 | 27.89 |
Protein Annotations
| KEGG:00360+4.3.1.24 | KEGG:00940+4.3.1.24 | Gene3D:1.10.274.20 | Gene3D:1.10.275.10 | Gene3D:1.20.200.10 | MapMan:9.2.1.1.1 |
| InterPro:Aromatic_Lyase | InterPro:Fumarase/histidase_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006559 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016841 | InterPro:IPR023144 | InterPro:IPR024083 | InterPro:L-Aspartase-like | PFAM:PF00221 |
| ScanProsite:PS00488 | PANTHER:PTHR10362 | PANTHER:PTHR10362:SF9 | InterPro:Phe/His_NH3-lyase_AS | InterPro:Phe_NH3-lyase | InterPro:Phe_NH3-lyase_shielding_dom_sf |
| SUPFAM:SSF48557 | TIGRFAMs:TIGR01226 | EnsemblPlantsGene:TraesCS4A01G401300 | EnsemblPlants:TraesCS4A01G401300.1 | TIGR:cd00332 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:675283412..675285824
Molecular Weight (calculated)
77092.3 Da
IEP (calculated)
6.153
GRAVY (calculated)
-0.140
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MECENGQVAG NGNSLCLAQP ARADPLNWGK AAEELSGSHL DAVKRMVEEY RRPVVTMEGA SLTIAMVAAV AAGAETRVEL DESARCRVKE SSDWVMNSMA
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGGHDHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA ALLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRANSV ATAPDGSKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMAL AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND LYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFMVALCQAI DLRHLEENVK DAVKSCVKMT ARKTLSTTNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLAAFE QELRAVLPKE VEAARTSVEN GTATQQNRIT ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFVAMN QGKHIDALLE
701: CLKEWNGEPL PLC
101: NGTDSYGVTT GFGATSHRRT KEGGALQREL IRFLNAGAFG TGGHDHVLPA AATRAAMLVR VNTLLQGYSG IRFEILETVA ALLNANVTPC LPLRGTITAS
201: GDLVPLSYIA GLVTGRANSV ATAPDGSKVN AAEAFKIAGI QHGFFELQPK EGLAMVNGTA VGSGLASMVL FEANILSLLA EVLSAVFCEV MNGKPEYTDH
301: LTHKLKHHPG QIEAAAIMEH ILEGSSYMAL AKKLGELDPL MKPKQDRYAL RTSPQWLGPQ IEVIRAATKS IEREINSVND NPLIDVSRGK AIHGGNFQGT
401: PIGVSMDNTR LAIAAIGKLM FAQFSELVND LYNNGLPSNL SGGRNPSLDY GFKGAEIAMA SYCSELQFLG NPVTNHVQSA EQHNQDVNSL GLISSRKTAE
501: AIDILKLMSS TFMVALCQAI DLRHLEENVK DAVKSCVKMT ARKTLSTTNN GHLHNARFCE KDLLLTIDRE AVFAYADDPC SANYPLMQKM RAVLVEHALA
601: NGEAERDVET SVFAKLAAFE QELRAVLPKE VEAARTSVEN GTATQQNRIT ECRSYPLYRF VRKELGTEYL TGEKTRSPGE EVDKVFVAMN QGKHIDALLE
701: CLKEWNGEPL PLC
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.