Factsheet for Bra003126.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003126.1-P
Bra006985.1-P
Bra008685.1-P
Bra023527.1-P
Bra029831.1-P
Bra039777.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G53260.1	Bra029831.1-P	AT3G10340.1	21798944
AT3G53260.1	Bra003126.1-P	AT3G53260.1	21798944
AT3G53260.1	Bra006985.1-P	AT3G53260.1	21798944
AT3G53260.1	Bra039777.1-P	AT3G53260.1	21798944
AT3G53260.1	Bra008685.1-P	AT5G15600.1	21798944
AT3G53260.1	Bra023527.1-P	AT5G15600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67566	Canola	cytosol	67.33	96.94
Bra006985.1-P	Field mustard	cytosol	93.64	93.77
AT3G53260.1	Thale cress	cytosol	93.92	92.61
Bra017210.1-P	Field mustard	cytosol, peroxisome, plastid	91.23	89.34
Bra005221.1-P	Field mustard	peroxisome	46.39	88.41
Bra039777.1-P	Field mustard	peroxisome	63.37	87.84
Solyc03g036470.1.1	Tomato	mitochondrion	26.73	82.53
Solyc03g036480.1.1	Tomato	peroxisome	11.88	82.35
PGSC0003DMT400080765	Potato	peroxisome	50.64	82.3
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	79.92	82.24
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	81.33	80.87
PGSC0003DMT400055489	Potato	mitochondrion	44.55	80.56
Solyc10g086180.1.1	Tomato	extracellular	80.76	80.31
GSMUA_Achr1P09070_001	Banana	peroxisome	74.26	80.28
Solyc03g042560.1.1	Tomato	peroxisome	52.9	80.26
KRG91925	Soybean	cytosol, peroxisome, plastid	81.19	80.06
Bra029831.1-P	Field mustard	cytosol	79.35	79.46
Solyc09g007920.2.1	Tomato	extracellular, nucleus	80.91	79.33
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	80.76	79.2
Solyc09g007910.2.1	Tomato	extracellular, nucleus	80.76	79.2
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	72.84	79.11
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	72.98	78.78
GSMUA_Achr2P00240_001	Banana	peroxisome	72.42	78.41
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	80.06	78.39
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	72.14	78.22
Solyc09g007890.1.1	Tomato	plastid	79.49	78.16
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	79.35	78.03
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	75.95	77.94
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	54.88	77.91
Solyc03g078280.1.1	Tomato	peroxisome	28.43	77.91
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	66.2	77.87
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	57.0	77.5
TraesCS1D01G039300.1	Wheat	mitochondrion	57.28	76.85
TraesCS2D01G204400.1	Wheat	peroxisome	71.99	76.2
HORVU2Hr1G089540.1	Barley	peroxisome	50.49	76.12
TraesCS2D01G377600.1	Wheat	plastid	75.67	75.46
TraesCS2A01G381100.1	Wheat	plastid	75.95	75.32
TraesCS2D01G204700.1	Wheat	peroxisome	75.25	75.25
TraesCS5B01G468400.1	Wheat	peroxisome	58.7	75.18
TraesCS2A01G381000.1	Wheat	plastid	75.81	75.18
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	75.81	75.18
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	75.11	75.11
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	75.67	75.04
TraesCS2B01G224000.1	Wheat	peroxisome	74.96	74.96
Os04t0518400-01	Rice	extracellular, plasma membrane	75.67	74.93
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	74.82	74.93
TraesCS2B01G398000.2	Wheat	plastid	75.53	74.89
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	75.53	74.89
TraesCS2D01G218700.1	Wheat	peroxisome	74.82	74.82
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	74.82	74.82
GSMUA_Achr11P...	Banana	peroxisome	68.03	74.81
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	75.39	74.75
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	75.39	74.75
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	74.82	74.72
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	74.68	74.68
TraesCS1D01G039400.1	Wheat	golgi	74.68	74.68
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	74.68	74.68
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	75.25	74.61
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	75.25	74.61
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	74.68	74.58
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	74.54	74.54
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	38.47	74.52
OQU81984	Sorghum	peroxisome	75.25	74.51
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	75.25	74.51
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	75.11	74.47
Zm00001d003015_P001	Maize	peroxisome	75.25	74.41
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	74.4	74.4
TraesCS2A01G196700.1	Wheat	peroxisome	74.4	74.4
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	75.11	74.37
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	74.96	74.23
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	74.96	74.23
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	74.82	74.19
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	74.82	74.09
Zm00001d017276_P001	Maize	peroxisome	73.55	73.86
Os02t0626400-01	Rice	mitochondrion, plasma membrane	74.96	73.82
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	15.13	73.79
Os02t0627100-01	Rice	plasma membrane	74.26	73.63
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	74.4	73.46
TraesCS6B01G258500.1	Wheat	extracellular, unclear	73.97	73.25
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	73.97	73.15
EES05455	Sorghum	cytosol, peroxisome, plastid	73.83	73.11
EES07176	Sorghum	cytosol, peroxisome, plastid	73.83	73.11
EES07177	Sorghum	cytosol, peroxisome, plastid	73.83	73.11
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	73.83	73.11
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	73.69	72.97
Zm00001d051166_P001	Maize	extracellular	73.83	72.91
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	68.88	72.9
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	73.69	72.87
Zm00001d051163_P002	Maize	peroxisome	73.97	72.84
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	72.98	72.47
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	72.98	72.47
EES07175	Sorghum	cytosol, peroxisome, plastid	73.55	72.42
Zm00001d017275_P001	Maize	extracellular	73.55	72.32
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	72.56	72.05
TraesCS6D01G212500.1	Wheat	peroxisome	72.56	72.05
TraesCS2B01G020100.1	Wheat	peroxisome	69.31	71.95
PGSC0003DMT400055529	Potato	cytosol	16.97	71.86
TraesCS2B01G398300.2	Wheat	peroxisome	37.2	71.47
Os02t0626600-00	Rice	plasma membrane	71.0	70.21
Os04t0518100-01	Rice	plasma membrane	70.16	70.16
HORVU2Hr1G089440.9	Barley	plasma membrane	75.81	69.88
Bra030322.1-P	Field mustard	cytosol, peroxisome, plastid	68.88	69.77
Os02t0626100-01	Rice	extracellular, plasma membrane	69.17	69.76
EES12521	Sorghum	cytosol	69.02	69.42
TraesCS2A01G212600.1	Wheat	cytosol	25.88	69.06
Zm00001d051161_P003	Maize	plastid	68.6	68.99
TraesCS3B01G027800.1	Wheat	mitochondrion	53.04	68.93
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	68.6	68.89
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	68.6	68.89
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	68.6	68.89
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	70.44	68.88
Zm00001d029015_P001	Maize	peroxisome	38.76	68.84
Zm00001d017274_P001	Maize	plasma membrane	68.32	68.71
EES07174	Sorghum	cytosol, peroxisome, plastid	68.32	68.61
Zm00001d033286_P001	Maize	peroxisome	66.76	67.62
Os12t0520200-01	Rice	plasma membrane	64.07	66.62
TraesCS3D01G016300.1	Wheat	peroxisome	64.07	65.75
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	64.07	65.65
TraesCS3A01G029200.1	Wheat	peroxisome	63.93	65.6
TraesCS3B01G053900.1	Wheat	peroxisome	63.79	65.46
EER93773	Sorghum	peroxisome	65.35	65.16
Zm00001d027249_P001	Maize	peroxisome	20.37	64.57
TraesCSU01G030700.1	Wheat	peroxisome	61.53	64.06
TraesCS3D01G016500.1	Wheat	peroxisome	61.81	63.43
Solyc03g071870.1.1	Tomato	peroxisome	15.28	62.79
Zm00001d020933_P001	Maize	mitochondrion	18.67	62.56
Zm00001d003016_P001	Maize	plastid	69.73	62.48
HORVU6Hr1G058820.2	Barley	mitochondrion	62.38	62.2
Solyc10g011930.1.1	Tomato	cytosol	10.75	59.84
VIT_11s0016g01640.t01	Wine grape	peroxisome	55.59	59.1
Solyc10g011920.1.1	Tomato	cytosol	10.47	58.27
Zm00001d053619_P001	Maize	mitochondrion	34.37	57.45
GSMUA_Achr9P15990_001	Banana	peroxisome	56.15	56.47
Bra028793.1-P	Field mustard	peroxisome	22.91	55.1
Zm00001d051164_P001	Maize	peroxisome	12.02	54.14
VIT_11s0016g01660.t01	Wine grape	peroxisome	13.01	52.87
HORVU2Hr1G062750.1	Barley	mitochondrion	13.58	52.17
VIT_11s0016g01520.t01	Wine grape	peroxisome	63.22	49.94
Os12t0461300-00	Rice	plastid	16.97	47.43
Os08t0308300-00	Rice	plastid	10.33	38.83
VIT_11s0016g01510.t01	Wine grape	peroxisome	12.45	24.79

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:9.2.1.1.1
InterPro:Aromatic_Lyase	EnsemblPlantsGene:Bra003126	EnsemblPlants:Bra003126.1	EnsemblPlants:Bra003126.1-P	InterPro:Fumarase/histidase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006559
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009698	GO:GO:0009800
GO:GO:0009987	GO:GO:0016829	GO:GO:0016841	GO:GO:0019748	GO:GO:0045548	InterPro:IPR023144
InterPro:IPR024083	InterPro:L-Aspartase-like	UniProt:M4CFZ4	PFAM:PF00221	ScanProsite:PS00488	PANTHER:PTHR10362
PANTHER:PTHR10362:SF32	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557	TIGRFAMs:TIGR01226
UniParc:UPI0002541351	:	:	:	:	:

Description

AT3G53260 (E=0.0) PAL2, ATPAL2 | PAL2; phenylalanine ammonia-lyase

Coordinates

chrA07:-:11474713..11477414

Molecular Weight (calculated)

76721.9 Da

IEP (calculated)

6.217

GRAVY (calculated)

-0.157

Length

707 amino acids

Sequence
(BLAST)

001: MLCGGVEKTN VAVAADPLNW GAAAEQMKGS HLDEVKRMVE EYRRPVVNLG GETLTIGQVA AISTVGNGVK VELAEASRAG VKASSDWVME SMGKGTDSYG
101: VTTGFGATSH RRTKNGVALQ TELIRFLNAG IFGNTKETCH TLPESATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT ITASGDLVPL
201: SYIAGLLTGR PNSKATGPNG ESLTAEEAFK QAGIASGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ SVLAEVLSAI FAEVMSGKPE FTDHLTHRLK
301: HHPGQIEAAA IMEHILEGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRY ATRSIEREIN SVNDNPLIDV SRNKAIHGGN FQGTPIGVSM
401: DNTRLAVAAI GKLMFAQFSE LVNDFYNNGL PSNLTASNNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR KTSEAVDILK
501: LMSTTFLVAI CQAVDLRHLE ENLRQAVKNT VSQVAKKVLT TGVNGEMHPS RFCERDLLKV VDREQVFTYV DDPCSASYPL MQKLRQVIVD HALANGETEK
601: NVETSIFQKI GAFEEELKTV LPKEVDAARE AYGNGNAAIP NRIKECRSYP LYKFVRGELG TKLLTGEKVV SPGEEFDKVF TAMCEGKIID PLMDCLKEWN
701: GAPIPLC

Best Arabidopsis Sequence Match ( AT3G53260.1 )
(BLAST)

001: MDQIEAMLCG GGEKTKVAVT TKTLADPLNW GLAADQMKGS HLDEVKKMVE EYRRPVVNLG GETLTIGQVA AISTVGGSVK VELAETSRAG VKASSDWVME
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC

Arabidopsis Description

PAL2Phenylalanine ammonia-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P45724]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.