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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • vacuole 2
  • mitochondrion 5
  • cytosol 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37040.1 Solyc03g036470.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g036480.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g042560.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g071860.2.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g071870.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g078270.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g078280.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc09g007890.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc09g007900.2.1 AT2G37040.1 21798944
AT2G37040.1 Solyc09g007910.2.1 AT2G37040.1 21798944
AT2G37040.1 Solyc09g007920.2.1 AT2G37040.1 21798944
AT2G37040.1 Solyc10g011920.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc10g011930.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc10g086180.1.1 AT2G37040.1 21798944
AT2G37040.1 Solyc03g036470.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc03g036480.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc03g042560.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc03g071860.2.1 AT3G10340.1 21798944
AT2G37040.1 Solyc03g071870.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc03g078270.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc03g078280.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc09g007890.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc09g007900.2.1 AT3G10340.1 21798944
AT2G37040.1 Solyc09g007910.2.1 AT3G10340.1 21798944
AT2G37040.1 Solyc09g007920.2.1 AT3G10340.1 21798944
AT2G37040.1 Solyc10g011920.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc10g011930.1.1 AT3G10340.1 21798944
AT2G37040.1 Solyc10g086180.1.1 AT3G10340.1 21798944
AT3G10340.1 Solyc03g120320.1.1 AT1G15670.1 21798944
AT3G10340.1 Solyc03g120330.1.1 AT1G15670.1 21798944
AT3G10340.1 Solyc06g066770.1.1 AT1G15670.1 21798944
AT3G53260.1 Solyc03g036470.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g036480.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g042560.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g071860.2.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g071870.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g078270.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g078280.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc09g007890.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc09g007900.2.1 AT3G10340.1 21798944
AT3G53260.1 Solyc09g007910.2.1 AT3G10340.1 21798944
AT3G53260.1 Solyc09g007920.2.1 AT3G10340.1 21798944
AT3G53260.1 Solyc10g011920.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc10g011930.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc10g086180.1.1 AT3G10340.1 21798944
AT3G53260.1 Solyc03g036470.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc03g036480.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc03g042560.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc03g071860.2.1 AT3G53260.1 21798944
AT3G53260.1 Solyc03g071870.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc03g078270.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc03g078280.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc09g007890.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc09g007900.2.1 AT3G53260.1 21798944
AT3G53260.1 Solyc09g007910.2.1 AT3G53260.1 21798944
AT3G53260.1 Solyc09g007920.2.1 AT3G53260.1 21798944
AT3G53260.1 Solyc10g011920.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc10g011930.1.1 AT3G53260.1 21798944
AT3G53260.1 Solyc10g086180.1.1 AT3G53260.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g078270.1.1 Tomato endoplasmic reticulum 49.34 77.93
Zm00001d020933_P001 Maize mitochondrion 51.97 56.4
Zm00001d027249_P001 Maize peroxisome 38.43 39.46
Zm00001d053619_P001 Maize mitochondrion 72.05 39.01
Zm00001d029015_P001 Maize peroxisome 65.94 37.94
HORVU2Hr1G089540.1 Barley peroxisome 76.86 37.53
CDY18463 Canola peroxisome 42.79 37.26
CDY66761 Canola cytosol, peroxisome, plastid 83.41 36.8
CDX76219 Canola cytosol 82.53 36.21
CDX73567 Canola cytosol 75.55 34.88
CDX78161 Canola cytosol 75.55 34.88
CDX67566 Canola cytosol 74.67 34.83
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 75.55 33.27
Bra039777.1-P Field mustard peroxisome 72.05 32.35
TraesCS5B01G468400.1 Wheat peroxisome 76.42 31.7
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 79.04 30.12
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 93.89 29.82
Solyc09g007910.2.1 Tomato extracellular, nucleus 93.89 29.82
Solyc09g007920.2.1 Tomato extracellular, nucleus 93.89 29.82
Solyc09g007890.1.1 Tomato plastid 93.45 29.76
TraesCS1D01G039300.1 Wheat mitochondrion 68.12 29.6
Solyc10g086180.1.1 Tomato extracellular 89.96 28.97
CDX99621 Canola mitochondrion 69.0 28.88
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 82.1 28.88
Solyc05g056170.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 87.77 28.35
GSMUA_Achr1P09070_001 Banana peroxisome 80.79 28.29
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 84.28 28.09
VIT_13s0019g04460.t01 Wine grape cytosol, endoplasmic reticulum, peroxisome 88.21 27.94
GSMUA_Achr2P00240_001 Banana peroxisome 79.48 27.87
GSMUA_Achr11P... Banana peroxisome 78.17 27.84
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 79.04 27.76
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 79.04 27.63
AT3G10340.1 Thale cress peroxisome 83.41 27.02
KRG91925 Soybean cytosol, peroxisome, plastid 84.28 26.92
Bra003126.1-P Field mustard cytosol 82.53 26.73
Bra017210.1-P Field mustard cytosol, peroxisome, plastid 84.28 26.73
AT3G53260.1 Thale cress cytosol 82.97 26.5
AT2G37040.1 Thale cress cytosol, peroxisome, plastid 83.84 26.48
CDY00922 Canola cytosol 81.22 26.35
Bra029831.1-P Field mustard cytosol 80.79 26.2
CDY08611 Canola cytosol 80.79 26.2
TraesCS3B01G027800.1 Wheat mitochondrion 61.57 25.92
TraesCS2D01G204400.1 Wheat peroxisome 75.55 25.9
Zm00001d017276_P001 Maize peroxisome 79.04 25.71
Bra030322.1-P Field mustard cytosol, peroxisome, plastid 77.73 25.5
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 79.04 25.42
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 79.04 25.42
Os02t0627100-01 Rice plasma membrane 79.04 25.39
AT5G04230.2 Thale cress peroxisome 77.29 25.36
CDY15917 Canola cytosol, peroxisome, plastid 77.29 25.36
EES05455 Sorghum cytosol, peroxisome, plastid 78.6 25.21
EES07176 Sorghum cytosol, peroxisome, plastid 78.6 25.21
EES07177 Sorghum cytosol, peroxisome, plastid 78.6 25.21
TraesCS6B01G258500.1 Wheat extracellular, unclear 78.6 25.21
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 78.6 25.21
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 78.6 25.17
Os02t0626600-00 Rice plasma membrane 78.6 25.17
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 78.6 25.17
TraesCS6D01G212500.1 Wheat peroxisome 78.17 25.14
Os05t0427400-00 Rice cytosol, peroxisome, plastid 78.17 25.0
TraesCS2B01G398000.2 Wheat plastid 77.73 24.96
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 77.73 24.96
TraesCS2D01G377600.1 Wheat plastid 77.29 24.96
EES07175 Sorghum cytosol, peroxisome, plastid 78.17 24.93
Os02t0626400-01 Rice mitochondrion, plasma membrane 78.17 24.93
Bra006985.1-P Field mustard cytosol 76.86 24.93
Zm00001d017275_P001 Maize extracellular 78.17 24.9
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 76.86 24.89
TraesCS1D01G039400.1 Wheat golgi 76.86 24.89
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 76.86 24.86
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 77.29 24.82
Os04t0518400-01 Rice extracellular, plasma membrane 77.29 24.79
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 76.42 24.75
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 76.42 24.75
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 76.42 24.75
Zm00001d051166_P001 Maize extracellular 77.29 24.72
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 76.42 24.72
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 76.86 24.68
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 76.86 24.68
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 76.86 24.68
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 76.86 24.65
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 75.98 24.65
Zm00001d003015_P001 Maize peroxisome 76.86 24.62
TraesCS2B01G224000.1 Wheat peroxisome 75.98 24.61
TraesCS2D01G204700.1 Wheat peroxisome 75.98 24.61
TraesCS2D01G218700.1 Wheat peroxisome 75.98 24.61
OQU81984 Sorghum peroxisome 76.42 24.51
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 76.42 24.51
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 76.42 24.51
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 75.98 24.4
Zm00001d051163_P002 Maize peroxisome 76.42 24.37
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 75.98 24.37
Os02t0626100-01 Rice extracellular, plasma membrane 74.24 24.25
Zm00001d017274_P001 Maize plasma membrane 74.24 24.18
TraesCS2B01G020100.1 Wheat peroxisome 71.18 23.94
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 75.55 23.93
EES12521 Sorghum cytosol 73.36 23.9
Zm00001d051161_P003 Maize plastid 73.36 23.9
EES07174 Sorghum cytosol, peroxisome, plastid 72.93 23.72
Zm00001d033286_P001 Maize peroxisome 72.05 23.64
Os04t0518100-01 Rice plasma membrane 72.93 23.62
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 72.05 23.44
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 71.62 23.3
HORVU6Hr1G058820.2 Barley mitochondrion 71.62 23.13
EER93773 Sorghum peroxisome 70.74 22.85
HORVU2Hr1G089440.9 Barley plasma membrane 76.42 22.82
Os12t0520200-01 Rice plasma membrane 67.69 22.79
TraesCS3D01G016300.1 Wheat peroxisome 67.69 22.5
TraesCS3B01G053900.1 Wheat peroxisome 67.25 22.35
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 66.81 22.17
Solyc03g042560.1.1 Tomato peroxisome 44.54 21.89
GSMUA_Achr9P15990_001 Banana peroxisome 66.81 21.76
Zm00001d003016_P001 Maize plastid 74.24 21.55
TraesCS3D01G016500.1 Wheat peroxisome 63.76 21.19
Solyc03g071870.1.1 Tomato peroxisome 15.72 20.93
CDY61769 Canola peroxisome 20.09 18.18
Bra028793.1-P Field mustard peroxisome 19.65 15.31
CDY18464 Canola peroxisome 25.33 13.71
Solyc03g071860.2.1 Tomato endoplasmic reticulum 20.09 12.6
Os12t0461300-00 Rice plastid 8.73 7.91
HORVU2Hr1G062750.1 Barley mitochondrion 5.24 6.52
Bra005221.1-P Field mustard peroxisome 10.48 6.47
CDX74991 Canola peroxisome 10.48 6.32
CDX91331 Canola peroxisome 10.48 6.32
Zm00001d051164_P001 Maize peroxisome 3.49 5.1
CDY13306 Canola peroxisome 3.93 4.29
Os08t0308300-00 Rice plastid 3.49 4.26
Solyc10g011930.1.1 Tomato cytosol 0.87 1.57
Solyc10g011920.1.1 Tomato cytosol 0.44 0.79
TraesCS2B01G398300.2 Wheat peroxisome 0.87 0.54
Solyc03g036480.1.1 Tomato peroxisome 0.0 0.0
Solyc03g078280.1.1 Tomato peroxisome 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc03g036470.1.1EnsemblPlantsGene:Solyc03g036470.1Gene3D:1.10.275.10Gene3D:1.20.200.10GO:GO:0003674GO:GO:0003824
GO:GO:0016841InterPro:Aromatic_LyaseInterPro:Fumarase/histidase_NInterPro:IPR024083InterPro:L-Aspartase-likeInterPro:Phe/His_NH3-lyase_AS
PANTHER:PTHR10362PANTHER:PTHR10362:SF32PFAM:PF00221ScanProsite:PS00488SUPFAM:SSF48557UniParc:UPI0002767DA5
UniProt:K4BFW8MapMan:9.2.1.1.1::::
Description
No Description!
Coordinates
chr3:+:6454558..6455247
Molecular Weight (calculated)
24700.1 Da
IEP (calculated)
7.635
GRAVY (calculated)
0.145
Length
229 amino acids
Sequence
(BLAST)
001: MIFFCRFLNA GVFGNGIESS HTLPHSATRA AMLVRINTLL QGYSGIRFEI LEAITKLINS NITPCLPLRG TITASGDLVP LSYIAGLLTG RPNSKAVGPN
101: GEKLNAEEAF CVAGISGGFF ELQPKEGLAL VNGTAVGSAM ASIVLFESNI LALMSEVLSA IFAEVMNGKP EFTDYLTHKL KHHPGQIEAA AIMEHILDGS
201: SYVKVAQKLH EMDPLQKRKQ DRYALRTSP
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.