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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67566
CDX69512
CDX73567
CDX76219
CDX78161
CDX85544
CDX90984
CDY00922
CDY08611
CDY13306
CDY26443
CDY66761

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G53260.1 CDY00922 AT3G10340.1 21798944
AT3G53260.1 CDY08611 AT3G10340.1 21798944
AT3G53260.1 CDX67566 AT3G53260.1 21798944
AT3G53260.1 CDX73567 AT3G53260.1 21798944
AT3G53260.1 CDX76219 AT3G53260.1 21798944
AT3G53260.1 CDX78161 AT3G53260.1 21798944
AT3G53260.1 CDY13306 AT3G53260.1 21798944
AT3G53260.1 CDY66761 AT3G53260.1 21798944
AT3G53260.1 CDX69512 AT5G15600.1 21798944
AT3G53260.1 CDX85544 AT5G15600.1 21798944
AT3G53260.1 CDX90984 AT5G15600.1 21798944
AT3G53260.1 CDY26443 AT5G15600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78161 Canola cytosol 99.19 99.19
CDX67566 Canola cytosol 95.36 96.33
CDY13306 Canola peroxisome 40.52 95.71
CDY66761 Canola cytosol, peroxisome, plastid 96.98 92.68
CDX76219 Canola cytosol 96.37 91.57
Solyc03g036480.1.1 Tomato peroxisome 17.14 83.33
Solyc03g036470.1.1 Tomato mitochondrion 34.88 75.55
Solyc03g078270.1.1 Tomato endoplasmic reticulum 21.77 74.48
HORVU2Hr1G089540.1 Barley peroxisome 69.56 73.56
CDY18463 Canola peroxisome 38.31 72.24
TraesCS1A01G094900.1 Wheat cytosol, peroxisome, plastid 71.37 71.08
Bra006985.1-P Field mustard cytosol 95.36 67.0
Zm00001d029015_P001 Maize peroxisome 52.62 65.58
TraesCS5B01G468400.1 Wheat peroxisome 72.58 65.22
AT3G53260.1 Thale cress cytosol 92.94 64.3
GSMUA_Achr8P18960_001 Banana cytosol, peroxisome, plastid 75.6 62.4
Solyc03g071870.1.1 Tomato peroxisome 21.37 61.63
TraesCS2B01G398100.1 Wheat cytosol, peroxisome, plastid 64.31 61.35
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 78.43 59.39
GSMUA_Achr1P09070_001 Banana peroxisome 78.23 59.33
Zm00001d027249_P001 Maize peroxisome 26.61 59.19
GSMUA_Achr5P03950_001 Banana cytosol, peroxisome, plastid 77.42 58.99
GSMUA_Achr5P18560_001 Banana cytosol, peroxisome, plastid 77.42 58.9
GSMUA_Achr2P00240_001 Banana peroxisome 77.02 58.5
Solyc10g011930.1.1 Tomato cytosol 14.92 58.27
KRH34854 Soybean cytosol, endoplasmic reticulum, peroxisome 78.83 56.91
Solyc10g011920.1.1 Tomato cytosol 14.52 56.69
CDY00922 Canola cytosol 80.44 56.52
Zm00001d020933_P001 Maize mitochondrion 23.99 56.4
CDY08611 Canola cytosol 80.24 56.37
KRG91925 Soybean cytosol, peroxisome, plastid 81.45 56.35
GSMUA_Achr11P... Banana peroxisome 72.78 56.14
Solyc09g007910.2.1 Tomato extracellular, nucleus 81.45 56.03
PGSC0003DMT400080548 Potato cytosol, peroxisome, plastid 80.24 55.98
Solyc09g007900.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 81.25 55.89
Solyc09g007920.2.1 Tomato extracellular, nucleus 81.25 55.89
Solyc09g007890.1.1 Tomato plastid 80.65 55.63
Solyc10g086180.1.1 Tomato extracellular 79.64 55.56
PGSC0003DMT400055488 Potato cytosol, peroxisome, plastid 80.65 55.4
PGSC0003DMT400055531 Potato cytosol, peroxisome, plastid 79.84 55.08
Zm00001d053619_P001 Maize mitochondrion 46.77 54.85
TraesCS1D01G039300.1 Wheat mitochondrion 57.86 54.46
Zm00001d051164_P001 Maize peroxisome 17.14 54.14
TraesCS2D01G377600.1 Wheat plastid 77.02 53.88
PGSC0003DMT400049886 Potato nucleus, peroxisome, plastid 74.8 53.85
TraesCS2D01G377500.1 Wheat cytosol, peroxisome, plastid 77.02 53.58
HORVU1Hr1G022060.1 Barley cytosol, peroxisome, plastid 76.21 53.47
TraesCS1B01G048400.2 Wheat cytosol, peroxisome, plastid 76.21 53.47
TraesCS2D01G204700.1 Wheat peroxisome 76.21 53.47
TraesCS2D01G204400.1 Wheat peroxisome 71.98 53.44
Os04t0518400-01 Rice extracellular, plasma membrane 76.81 53.36
TraesCS1D01G039400.1 Wheat golgi 76.01 53.32
TraesCS2A01G196700.1 Wheat peroxisome 76.01 53.32
TraesCS2B01G224000.1 Wheat peroxisome 76.01 53.32
TraesCS5B01G468300.1 Wheat cytosol, peroxisome, plastid 76.01 53.32
TraesCS2A01G381100.1 Wheat plastid 76.61 53.3
TraesCS2B01G398000.2 Wheat plastid 76.61 53.3
TraesCS2D01G377200.1 Wheat cytosol, peroxisome, plastid 76.61 53.3
TraesCS2B01G224300.1 Wheat cytosol, peroxisome, plastid 75.81 53.26
TraesCS1D01G103500.1 Wheat cytosol, peroxisome, plastid 76.01 53.25
TraesCS1A01G037800.1 Wheat cytosol, peroxisome, plastid 76.61 53.22
HORVU2Hr1G038120.1 Barley cytosol, peroxisome, plastid 75.81 53.18
TraesCS2D01G218700.1 Wheat peroxisome 75.81 53.18
TraesCS2A01G381000.1 Wheat plastid 76.41 53.16
TraesCS2B01G398400.1 Wheat cytosol, peroxisome, plastid 76.41 53.16
TraesCS2D01G377400.1 Wheat cytosol, peroxisome, plastid 76.41 53.16
TraesCS1B01G122800.1 Wheat cytosol, peroxisome, plastid 75.81 53.11
TraesCS1B01G048200.1 Wheat cytosol, peroxisome, plastid 76.41 53.08
TraesCS1D01G039500.1 Wheat cytosol, peroxisome, plastid 76.41 53.08
TraesCS1A01G037700.1 Wheat cytosol, peroxisome, plastid 75.6 53.04
TraesCS1B01G048300.1 Wheat cytosol, peroxisome, plastid 76.21 53.02
TraesCS2A01G380800.1 Wheat cytosol, peroxisome, plastid 76.21 53.02
TraesCS2B01G398200.1 Wheat cytosol, peroxisome, plastid 76.21 53.02
TraesCS4A01G401300.1 Wheat cytosol, peroxisome, plastid 76.21 53.02
TraesCS1B01G048100.1 Wheat cytosol, peroxisome, plastid 76.21 52.94
TraesCS2A01G212900.1 Wheat cytosol, peroxisome, plastid 75.4 52.9
TraesCS2A01G380900.1 Wheat cytosol, peroxisome, plastid 76.01 52.88
TraesCS1B01G048500.1 Wheat cytosol, peroxisome, plastid 76.01 52.8
TraesCS6B01G258500.1 Wheat extracellular, unclear 75.6 52.52
Os02t0627100-01 Rice plasma membrane 75.4 52.45
HORVU0Hr1G016330.1 Barley cytosol, peroxisome, plastid 75.6 52.45
CDY15917 Canola cytosol, peroxisome, plastid 73.79 52.44
HORVU6Hr1G058840.1 Barley cytosol, peroxisome, plasma membrane 75.2 52.39
TraesCS6B01G258600.1 Wheat cytosol, peroxisome, plasma membrane 75.2 52.39
TraesCS6D01G212500.1 Wheat peroxisome 75.2 52.39
Os02t0626400-01 Rice mitochondrion, plasma membrane 75.81 52.37
Zm00001d017276_P001 Maize peroxisome 74.19 52.27
EES05455 Sorghum cytosol, peroxisome, plastid 75.2 52.24
EES07176 Sorghum cytosol, peroxisome, plastid 75.2 52.24
EES07177 Sorghum cytosol, peroxisome, plastid 75.2 52.24
OQU81984 Sorghum peroxisome 75.2 52.24
TraesCS6A01G222800.1 Wheat cytosol, peroxisome, plastid 75.2 52.24
TraesCS6D01G212400.1 Wheat cytosol, peroxisome, plastid 75.2 52.24
Os05t0427400-00 Rice cytosol, peroxisome, plastid 75.4 52.23
Zm00001d003015_P001 Maize peroxisome 75.2 52.17
Zm00001d017279_P001 Maize cytosol, peroxisome, plastid 75.0 52.03
TraesCS6A01G222700.1 Wheat cytosol, peroxisome, plasma membrane 74.6 51.97
CDX99621 Canola mitochondrion 57.26 51.92
Zm00001d017275_P001 Maize extracellular 75.0 51.74
Zm00001d051166_P001 Maize extracellular 74.6 51.68
Zm00001d051163_P002 Maize peroxisome 74.8 51.67
TraesCS2A01G196400.1 Wheat mitochondrion, plastid 69.56 51.65
EES07175 Sorghum cytosol, peroxisome, plastid 74.4 51.39
TraesCS2B01G020100.1 Wheat peroxisome 70.16 51.1
CDY18464 Canola peroxisome 42.54 49.88
HORVU2Hr1G089440.9 Barley plasma membrane 77.02 49.8
Os02t0626600-00 Rice plasma membrane 71.57 49.65
Os02t0626100-01 Rice extracellular, plasma membrane 69.35 49.07
EES12521 Sorghum cytosol 69.35 48.93
Zm00001d017274_P001 Maize plasma membrane 69.35 48.93
Os04t0518100-01 Rice plasma membrane 69.56 48.8
EES07174 Sorghum cytosol, peroxisome, plastid 69.15 48.72
TraesCS6A01G222900.1 Wheat extracellular, golgi, unclear 69.15 48.72
TraesCS6B01G258400.2 Wheat cytosol, peroxisome, plastid 69.15 48.72
TraesCS6D01G212200.1 Wheat extracellular, golgi, unclear 69.15 48.72
Solyc03g042560.1.1 Tomato peroxisome 45.77 48.71
Zm00001d051161_P003 Maize plastid 68.95 48.65
PGSC0003DMT400080765 Potato peroxisome 41.94 47.82
TraesCS3A01G029200.1 Wheat peroxisome 66.33 47.75
TraesCS3D01G016300.1 Wheat peroxisome 66.33 47.75
HORVU2Hr1G038140.1 Barley mitochondrion, plastid 69.56 47.72
Zm00001d033286_P001 Maize peroxisome 67.14 47.71
TraesCS3B01G027800.1 Wheat mitochondrion 52.22 47.61
TraesCS3B01G053900.1 Wheat peroxisome 66.13 47.61
Os12t0520200-01 Rice plasma membrane 65.12 47.5
HORVU3Hr1G005330.2 Barley cytosol, peroxisome, plasma membrane 65.93 47.39
EER93773 Sorghum peroxisome 66.33 46.4
TraesCS3D01G016500.1 Wheat peroxisome 64.31 46.3
HORVU2Hr1G062750.1 Barley mitochondrion 17.14 46.2
TraesCSU01G030700.1 Wheat peroxisome 62.9 45.95
CDY61769 Canola peroxisome 22.18 43.48
Zm00001d003016_P001 Maize plastid 69.15 43.47
HORVU6Hr1G058820.2 Barley mitochondrion 60.69 42.45
PGSC0003DMT400055489 Potato mitochondrion 32.26 40.92
CDX74991 Canola peroxisome 30.44 39.74
CDX91331 Canola peroxisome 30.44 39.74
GSMUA_Achr9P15990_001 Banana peroxisome 56.25 39.69
VIT_11s0016g01640.t01 Wine grape peroxisome 52.82 39.4
Solyc03g071860.2.1 Tomato endoplasmic reticulum 28.23 38.36
VIT_11s0016g01520.t01 Wine grape peroxisome 63.91 35.42
TraesCS2A01G212600.1 Wheat cytosol 18.35 34.34
TraesCS2B01G398300.2 Wheat peroxisome 24.19 32.61
Solyc03g078280.1.1 Tomato peroxisome 13.91 26.74
VIT_11s0016g01510.t01 Wine grape peroxisome 16.33 22.82
Os12t0461300-00 Rice plastid 9.48 18.58
PGSC0003DMT400055529 Potato cytosol 5.24 15.57
Os08t0308300-00 Rice plastid 3.02 7.98
VIT_11s0016g01660.t01 Wine grape peroxisome 0.4 1.15
Protein Annotations
KEGG:00360+4.3.1.24KEGG:00940+4.3.1.24Gene3D:1.10.275.10Gene3D:1.20.200.10MapMan:9.2.1.1.1GO:A0A078C9Q2
InterPro:Aromatic_LyaseEnsemblPlants:CDX73567ProteinID:CDX73567ProteinID:CDX73567.1InterPro:Fumarase/histidase_NGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006559
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009800GO:GO:0009987
GO:GO:0016841GO:GO:0019748GO:GO:0045548EnsemblPlantsGene:GSBRNA2T00109116001InterPro:IPR024083InterPro:L-Aspartase-like
PFAM:PF00221ScanProsite:PS00488PANTHER:PTHR10362PANTHER:PTHR10362:SF32MetaCyc:PWY-1121MetaCyc:PWY-5883
MetaCyc:PWY-6444MetaCyc:PWY-6457InterPro:Phe/His_NH3-lyase_ASInterPro:Phe_NH3-lyaseSUPFAM:SSF48557TIGRFAMs:TIGR01226
UniPathway:UPA00713UniParc:UPI0004EF4B20::::
Description
BnaC08g24360D
Coordinates
chrLK031799:+:1291608..1294574
Molecular Weight (calculated)
53228.7 Da
IEP (calculated)
6.198
GRAVY (calculated)
-0.118
Length
496 amino acids
Sequence
(BLAST)
001: MDQTNGSVHQ NGKIEAMLCG GVEKTKVAVA ADPLNWGAAA EQMKGSHLDE LKRMVEEYRR PVVNLGGETL TIGQVAAIST AGGGVKVELA EASRAGVKAS
101: SDWVMESMGK GTDSYGVTTG FGATSHRRTK NGTALQTELI RFLNAGIFVN TLLQGYSGIR FEILEAITSF LNHNISPSLP LRGTITASGD LVPLSYIAGL
201: LTGRPNSKAT GPNGESLTAE EAFKQAGIAS GFFDLQPKEG LALVNGTAVG SGMASMVLFE ANVQSVLAEV LSAIFAEVMS GKPEFTDHLT HRLKHHPGQI
301: EAAAIMEHIL DGSSYMKLAQ KLHEMDPLQK PKQDRYALRT SPQWLGPQIE VIRHATKSIE REINSVNDNP LIDVSRNKAI HGGNFQGTPI GVSMDNTRLA
401: IASIGKLMFA QFSELVNDFY NNGLPSNLTA SNNPSLDYGF KGAEIAMASY CSELQYLANP VTSHFDKVFT AMCEGKIIDP LMECLKEWNG APIPIC
Best Arabidopsis Sequence Match ( AT2G37040.1 )
(BLAST)
001: MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN
101: ASSDWVMESM NKGTDSYGVT TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF SGIRFEILEA ITSFLNNNIT
201: PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA
301: EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR
401: NKAIHGGNFQ GTPIGVSMDN TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY LANPVTSHVQ SAEQHNQDVN
501: SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ
601: KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA
701: ICEGKIIDPM MECLNEWNGA PIPIC
Arabidopsis Description
PAL1Phenylalanine ammonia-lyase 1 [Source:UniProtKB/Swiss-Prot;Acc:P35510]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.