Factsheet for AT3G53260.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003126.1-P	Field mustard	cytosol	92.61	93.92
CDX78161	Canola	cytosol	64.71	93.55
CDX67566	Canola	cytosol	63.88	93.28
CDX73567	Canola	cytosol	64.3	92.94
CDY66761	Canola	cytosol, peroxisome, plastid	67.22	92.87
Bra006985.1-P	Field mustard	cytosol	91.21	92.63
CDX76219	Canola	cytosol	67.36	92.53
CDY13306	Canola	peroxisome	26.5	90.48
AT2G37040.1	Thale cress	cytosol, peroxisome, plastid	90.24	89.24
Bra039777.1-P	Field mustard	peroxisome	62.2	87.45
PGSC0003DMT400080765	Potato	peroxisome	50.77	83.68
Solyc03g036470.1.1	Tomato	mitochondrion	26.5	82.97
KRH34854	Soybean	cytosol, endoplasmic reticulum, peroxisome	79.36	82.82
Solyc03g036480.1.1	Tomato	peroxisome	11.72	82.35
Solyc03g042560.1.1	Tomato	peroxisome	53.14	81.76
PGSC0003DMT400055489	Potato	mitochondrion	44.35	81.33
KRG91925	Soybean	cytosol, peroxisome, plastid	80.89	80.89
PGSC0003DMT400080548	Potato	cytosol, peroxisome, plastid	79.92	80.59
GSMUA_Achr1P09070_001	Banana	peroxisome	73.5	80.58
Solyc10g086180.1.1	Tomato	extracellular	79.36	80.03
AT3G10340.1	Thale cress	peroxisome	78.52	79.63
Solyc09g007920.2.1	Tomato	extracellular, nucleus	79.92	79.47
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	72.52	79.39
Solyc09g007900.2.1	Tomato	cytosol, endoplasmic reticulum, peroxisome	79.78	79.33
Solyc09g007910.2.1	Tomato	extracellular, nucleus	79.78	79.33
GSMUA_Achr5P03950_001	Banana	cytosol, peroxisome, plastid	71.97	79.26
PGSC0003DMT400055488	Potato	cytosol, peroxisome, plastid	79.78	79.22
GSMUA_Achr2P00240_001	Banana	peroxisome	71.97	79.02
PGSC0003DMT400055531	Potato	cytosol, peroxisome, plastid	79.22	79.0
GSMUA_Achr5P18560_001	Banana	cytosol, peroxisome, plastid	71.55	78.68
GSMUA_Achr8P18960_001	Banana	cytosol, peroxisome, plastid	65.55	78.2
Solyc09g007890.1.1	Tomato	plastid	78.24	78.03
PGSC0003DMT400049886	Potato	nucleus, peroxisome, plastid	74.9	77.94
TraesCS2B01G398100.1	Wheat	cytosol, peroxisome, plastid	56.49	77.88
TraesCS1A01G094900.1	Wheat	cytosol, peroxisome, plastid	53.97	77.71
Solyc03g078280.1.1	Tomato	peroxisome	27.89	77.52
TraesCS1D01G039300.1	Wheat	mitochondrion	56.49	76.85
TraesCS2D01G204400.1	Wheat	peroxisome	71.27	76.5
HORVU2Hr1G089540.1	Barley	peroxisome	49.65	75.91
TraesCS2D01G377600.1	Wheat	plastid	74.76	75.6
Solyc03g071860.2.1	Tomato	endoplasmic reticulum	38.35	75.34
TraesCS2B01G398000.2	Wheat	plastid	74.9	75.32
TraesCS2D01G377200.1	Wheat	cytosol, peroxisome, plastid	74.76	75.18
GSMUA_Achr11P...	Banana	peroxisome	67.36	75.12
TraesCS1B01G048400.2	Wheat	cytosol, peroxisome, plastid	74.06	75.11
TraesCS2A01G381100.1	Wheat	plastid	74.62	75.04
TraesCS2D01G377500.1	Wheat	cytosol, peroxisome, plastid	74.62	75.04
TraesCS2B01G224000.1	Wheat	peroxisome	73.92	74.96
Os04t0518400-01	Rice	extracellular, plasma membrane	74.62	74.93
TraesCS2A01G381000.1	Wheat	plastid	74.48	74.89
TraesCS2B01G398200.1	Wheat	cytosol, peroxisome, plastid	74.48	74.89
HORVU1Hr1G022060.1	Barley	cytosol, peroxisome, plastid	73.78	74.82
TraesCS2D01G204700.1	Wheat	peroxisome	73.78	74.82
TraesCS5B01G468300.1	Wheat	cytosol, peroxisome, plastid	73.78	74.82
TraesCS2B01G224300.1	Wheat	cytosol, peroxisome, plastid	73.64	74.79
TraesCS2A01G380800.1	Wheat	cytosol, peroxisome, plastid	74.34	74.75
TraesCS2B01G398400.1	Wheat	cytosol, peroxisome, plastid	74.34	74.75
TraesCS2D01G377400.1	Wheat	cytosol, peroxisome, plastid	74.34	74.75
TraesCS1B01G122800.1	Wheat	cytosol, peroxisome, plastid	73.78	74.72
TraesCS1D01G103500.1	Wheat	cytosol, peroxisome, plastid	73.78	74.72
Zm00001d003015_P001	Maize	peroxisome	74.48	74.69
TraesCS1D01G039400.1	Wheat	golgi	73.64	74.68
TraesCS5B01G468400.1	Wheat	peroxisome	57.46	74.64
HORVU2Hr1G038120.1	Barley	cytosol, peroxisome, plastid	73.5	74.54
TraesCS1A01G037700.1	Wheat	cytosol, peroxisome, plastid	73.5	74.54
TraesCS2D01G218700.1	Wheat	peroxisome	73.5	74.54
OQU81984	Sorghum	peroxisome	74.2	74.51
TraesCS1D01G039500.1	Wheat	cytosol, peroxisome, plastid	74.2	74.51
Solyc03g078270.1.1	Tomato	endoplasmic reticulum	15.06	74.48
TraesCS2A01G380900.1	Wheat	cytosol, peroxisome, plastid	74.06	74.47
TraesCS2A01G212900.1	Wheat	cytosol, peroxisome, plastid	73.36	74.4
TraesCS1B01G048100.1	Wheat	cytosol, peroxisome, plastid	74.06	74.37
TraesCS1B01G048200.1	Wheat	cytosol, peroxisome, plastid	74.06	74.37
TraesCS4A01G401300.1	Wheat	cytosol, peroxisome, plastid	73.92	74.33
Zm00001d017276_P001	Maize	peroxisome	72.94	74.29
TraesCS2A01G196700.1	Wheat	peroxisome	73.22	74.26
Os02t0627100-01	Rice	plasma membrane	73.78	74.19
TraesCS1B01G048300.1	Wheat	cytosol, peroxisome, plastid	73.78	74.19
Os02t0626400-01	Rice	mitochondrion, plasma membrane	74.2	74.09
TraesCS1A01G037800.1	Wheat	cytosol, peroxisome, plastid	73.78	74.09
TraesCS1B01G048500.1	Wheat	cytosol, peroxisome, plastid	73.78	74.09
Os05t0427400-00	Rice	cytosol, peroxisome, plastid	73.64	73.74
Zm00001d017279_P001	Maize	cytosol, peroxisome, plastid	73.22	73.43
EES05455	Sorghum	cytosol, peroxisome, plastid	73.08	73.39
EES07176	Sorghum	cytosol, peroxisome, plastid	73.08	73.39
EES07177	Sorghum	cytosol, peroxisome, plastid	73.08	73.39
TraesCS6B01G258500.1	Wheat	extracellular, unclear	72.94	73.25
HORVU6Hr1G058840.1	Barley	cytosol, peroxisome, plasma membrane	72.66	73.17
TraesCS6B01G258600.1	Wheat	cytosol, peroxisome, plasma membrane	72.66	73.17
HORVU0Hr1G016330.1	Barley	cytosol, peroxisome, plastid	72.94	73.15
TraesCS6A01G222800.1	Wheat	cytosol, peroxisome, plastid	72.8	73.11
TraesCS2A01G196400.1	Wheat	mitochondrion, plastid	68.06	73.05
TraesCS6D01G212400.1	Wheat	cytosol, peroxisome, plastid	72.66	72.97
Zm00001d051163_P002	Maize	peroxisome	72.94	72.84
Zm00001d051166_P001	Maize	extracellular	72.66	72.77
TraesCS6D01G212500.1	Wheat	peroxisome	72.25	72.75
TraesCS6A01G222700.1	Wheat	cytosol, peroxisome, plasma membrane	72.11	72.61
Zm00001d017275_P001	Maize	extracellular	72.8	72.6
AT5G04230.2	Thale cress	peroxisome	70.57	72.49
PGSC0003DMT400055529	Potato	cytosol	16.88	72.46
TraesCS2B01G020100.1	Wheat	peroxisome	68.48	72.1
EES07175	Sorghum	cytosol, peroxisome, plastid	72.11	72.01
Os04t0518100-01	Rice	plasma membrane	70.01	71.0
TraesCS2B01G398300.2	Wheat	peroxisome	36.4	70.92
Os02t0626600-00	Rice	plasma membrane	70.57	70.77
Os02t0626100-01	Rice	extracellular, plasma membrane	69.18	70.76
EES12521	Sorghum	cytosol	69.04	70.41
TraesCS3B01G027800.1	Wheat	mitochondrion	53.42	70.4
Zm00001d017274_P001	Maize	plasma membrane	68.62	69.99
Zm00001d051161_P003	Maize	plastid	68.62	69.99
EES07174	Sorghum	cytosol, peroxisome, plastid	68.62	69.89
TraesCS6A01G222900.1	Wheat	extracellular, golgi, unclear	68.62	69.89
TraesCS6B01G258400.2	Wheat	cytosol, peroxisome, plastid	68.62	69.89
TraesCS6D01G212200.1	Wheat	extracellular, golgi, unclear	68.62	69.89
TraesCS2A01G212600.1	Wheat	cytosol	25.8	69.81
HORVU2Hr1G089440.9	Barley	plasma membrane	74.62	69.75
HORVU2Hr1G038140.1	Barley	mitochondrion, plastid	69.32	68.74
Zm00001d029015_P001	Maize	peroxisome	38.08	68.59
Zm00001d033286_P001	Maize	peroxisome	65.83	67.62
TraesCS3A01G029200.1	Wheat	peroxisome	63.88	66.47
Os12t0520200-01	Rice	plasma membrane	63.04	66.47
TraesCS3B01G053900.1	Wheat	peroxisome	63.74	66.33
TraesCS3D01G016300.1	Wheat	peroxisome	63.74	66.33
HORVU3Hr1G005330.2	Barley	cytosol, peroxisome, plasma membrane	63.6	66.09
EER93773	Sorghum	peroxisome	64.44	65.16
TraesCSU01G030700.1	Wheat	peroxisome	61.51	64.95
TraesCS3D01G016500.1	Wheat	peroxisome	61.92	64.44
Solyc03g071870.1.1	Tomato	peroxisome	15.34	63.95
HORVU6Hr1G058820.2	Barley	mitochondrion	63.04	63.75
Zm00001d027249_P001	Maize	peroxisome	19.8	63.68
Zm00001d003016_P001	Maize	plastid	69.32	62.99
Zm00001d020933_P001	Maize	mitochondrion	18.41	62.56
VIT_11s0016g01640.t01	Wine grape	peroxisome	54.81	59.1
Solyc10g011930.1.1	Tomato	cytosol	10.32	58.27
Zm00001d053619_P001	Maize	mitochondrion	34.03	57.68
Solyc10g011920.1.1	Tomato	cytosol	10.04	56.69
GSMUA_Achr9P15990_001	Banana	peroxisome	55.37	56.47
VIT_11s0016g01660.t01	Wine grape	peroxisome	12.97	53.45
Zm00001d051164_P001	Maize	peroxisome	11.58	52.87
HORVU2Hr1G062750.1	Barley	mitochondrion	13.39	52.17
VIT_11s0016g01520.t01	Wine grape	peroxisome	62.62	50.17
Os12t0461300-00	Rice	plastid	16.74	47.43
Os08t0308300-00	Rice	plastid	10.32	39.36
VIT_11s0016g01510.t01	Wine grape	peroxisome	12.13	24.51

Protein Annotations

KEGG:00360+4.3.1.24	KEGG:00940+4.3.1.24	Gene3D:1.10.274.20	Gene3D:1.10.275.10	Gene3D:1.20.200.10	EntrezGene:824493
MapMan:9.2.1.1.1	ProteinID:AAC18871.1	ProteinID:AEE79055.1	EMBL:AF367308	ArrayExpress:AT3G53260	EnsemblPlantsGene:AT3G53260
RefSeq:AT3G53260	TAIR:AT3G53260	RefSeq:AT3G53260-TAIR-G	EnsemblPlants:AT3G53260.1	TAIR:AT3G53260.1	EMBL:AY092957
EMBL:AY133595	EMBL:AY303129	InterPro:Aromatic_Lyase	EMBL:BT000035	ProteinID:CAB64229.1	InterPro:Fumarase/histidase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006559	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009628	GO:GO:0009698
GO:GO:0009699	GO:GO:0009800	GO:GO:0009987	GO:GO:0016829	GO:GO:0016841	GO:GO:0019748
GO:GO:0045548	GO:GO:0080167	InterPro:IPR023144	InterPro:IPR024083	InterPro:L-Aspartase-like	RefSeq:NP_190894.1
UniProt:P45724	Symbol:PAL2	PFAM:PF00221	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001170	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00488	PANTHER:PTHR10362
PANTHER:PTHR10362:SF32	InterPro:Phe/His_NH3-lyase_AS	InterPro:Phe_NH3-lyase	InterPro:Phe_NH3-lyase_shielding_dom_sf	SUPFAM:SSF48557	TIGRFAMs:TIGR01226
UniParc:UPI00000014F1	SEG:seg	:	:	:	:

Description

PAL2Phenylalanine ammonia-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P45724]

Coordinates

chr3:-:19744018..19747114

Molecular Weight (calculated)

77864.4 Da

IEP (calculated)

6.418

GRAVY (calculated)

-0.171

Length

717 amino acids

Sequence
(BLAST)

001: MDQIEAMLCG GGEKTKVAVT TKTLADPLNW GLAADQMKGS HLDEVKKMVE EYRRPVVNLG GETLTIGQVA AISTVGGSVK VELAETSRAG VKASSDWVME
101: SMNKGTDSYG VTTGFGATSH RRTKNGTALQ TELIRFLNAG IFGNTKETCH TLPQSATRAA MLVRVNTLLQ GYSGIRFEIL EAITSLLNHN ISPSLPLRGT
201: ITASGDLVPL SYIAGLLTGR PNSKATGPDG ESLTAKEAFE KAGISTGFFD LQPKEGLALV NGTAVGSGMA SMVLFEANVQ AVLAEVLSAI FAEVMSGKPE
301: FTDHLTHRLK HHPGQIEAAA IMEHILDGSS YMKLAQKVHE MDPLQKPKQD RYALRTSPQW LGPQIEVIRQ ATKSIEREIN SVNDNPLIDV SRNKAIHGGN
401: FQGTPIGVSM DNTRLAIAAI GKLMFAQFSE LVNDFYNNGL PSNLTASSNP SLDYGFKGAE IAMASYCSEL QYLANPVTSH VQSAEQHNQD VNSLGLISSR
501: KTSEAVDILK LMSTTFLVGI CQAVDLRHLE ENLRQTVKNT VSQVAKKVLT TGINGELHPS RFCEKDLLKV VDREQVFTYV DDPCSATYPL MQRLRQVIVD
601: HALSNGETEK NAVTSIFQKI GAFEEELKAV LPKEVEAARA AYGNGTAPIP NRIKECRSYP LYRFVREELG TKLLTGEKVV SPGEEFDKVF TAMCEGKLID
701: PLMDCLKEWN GAPIPIC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.